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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100013g71.9755.mrna |
| Orig protein id | gnl|cribi|Naga_100013g71.9755 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:391399..393423 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna152 ID=rna152|Name=rna152|organism=Nannochloropsis gaditana|type=mRNA|length=1836bp
TCCCTTCTGCTACTACGGAGACAAGCGCTCAAAACCTGGCCTCAACCAGC
CTGGAAAACAAAGGACTTGACAGGCATGAATTTCTCTACCACACCACGTA
CAGGTCCTCTGGTCCTTGGCGAGCCCGGGAGTCTCAGAGGGGTGCAACTC
AATTACTCCCCCAAATAGAGGACATTAAGTCACAGCTTCGACAATTTTGA
CGTTTCTGACGCGTTACAGGGCTATAGTAATGGGCAATCGCGCGTACGGG
AGAGTTTTGCGCCGAAGAGAAGCCATTTTTGCGACCAGGAACCTCCTATC
CTCATGTCTCGTCGCCTTCTTTCTTCTACGTTGCAACGATGGGAATGTTC
AAGCGTTTCAAAGTGTAATACCTCTTAAATCTTCACGAGGCATCATACTT
TCCGCTGCACCTCAAAGCTCTGTACCTGCCCCAATCGGAGTCACCGCGGA
GACGGTCACCTTCCCTAATACGGGGTTGTCCATGGAGGTCCTCAGCGCCA
AATCACACTCCTCGTCCTCGTCCGGTCCCGACAACATACTGGCAGCCTTG
TCTTCATTTTTTTGGCCCAAAGTCCGCCGTAAGCAACCGCTGGTTTTCAT
CCACGGATCTTTTCATTCTGCCTGGTGTTGGGCCGAGCATTTCCTTCCCT
TTTTTGCAGCACGAGGATATGACAGCTACGCTATCTCCTGTCGGGGCACC
TTTCCTTCTCCGTCACCCAATCAAGAAGCAAGTATAACCATCAATACCCA
CGCGGCAGATCTGCGAGACTTTCTGAGGGTTGCCTTCCCTCCTAGCGAGC
AAGACACCCCTCAACCGATCCTCATTGGTCACTCGTTTGGCGGAGCCATC
CTCCTCAAACTGCTTGAGCAGCCCACCCCCTCGCCACTGAGGGGCGTCGC
TTTTCTGTGTTCCGTTCCTCCCTCTGGAAATGGTCCGATGACTGCTCGCT
TTCTCAAGAGAGATTTCATCCTCGCGCTGAAAATCGTCTTGGGCTTTGTG
GCCAAGAAAGGGGCAGAGTGGGACTGGCTGTGTCAAGAGCTCTTCTTCAG
CCCCTCGCTTCCTCCTGACTTACTTCGAAAGTACAAAAAGAGGCTGAAGA
AGGACTCTGTGGTCGGCATCGATGTTAAGGATTTCCTCAAGGAACTGCCG
GTCTTGCGCGCGGACGGGGCGACAGGGCAGGGCCGATGGGTGAAGGAAGT
CCCGTCTCGTCTCGTGATCGGTAGGGGGGAGGATTGTCTTGAATATTTGG
AAAGAGGTCTCGTTACCCGGACACTCGACAGCTTGTTGATGGCATAATCT
AGATTCGAATCAAAAGTTGCGTGATGGTCTGCAGTTATCACCAGGCATGT
GAGGAGGCTTCCCTGAGCGTGGGACCTAATAGATCCTGCATTTTTATTTC
CCTTCCCGAGCACTTTTATTTCCCTTCCCGAGGAGTGTCTCCCTCGACTG
TGGTCGGCGTTCTGTTTTATCTTCGCGCTTCTCGCTGACAAGTTTCCTTG
TTTTCTTCTCGACGCAGGGGCGGAACGCGACAAGCTTGTGGACAAAGAAG
GTGTGGAGGAAACGGCACGATTCGTAGATGCAGAACCACCAGTCTTTCTT
CCAACGGCGCACGATGCCATGCTGGATCCAGAATGGCGTCTTGCGGCCAA
TGCTTTGCTGCAGTGGTTGAATGCAATGGATCAGGCGGTCAAGAAGTAAA
GTACTTGGGAAACCCCAAATCGAGCTTGAACGGCGGATAAAGTCATAAAA
TAACGTGCCCCACTGTTTGAATAAGACTCCCCCTTCTCAACTGGTAGGAA
AATGATGAAAGATTTTTTATTTTGTTACAAAAACAT back to topprotein sequence of rna152 >rna152-protein ID=rna152-protein|Name=rna152|organism=Nannochloropsis gaditana|type=polypeptide|length=390bp
MGNRAYGRVLRRREAIFATRNLLSSCLVAFFLLRCNDGNVQAFQSVIPLK
SSRGIILSAAPQSSVPAPIGVTAETVTFPNTGLSMEVLSAKSHSSSSSGP
DNILAALSSFFWPKVRRKQPLVFIHGSFHSAWCWAEHFLPFFAARGYDSY
AISCRGTFPSPSPNQEASITINTHAADLRDFLRVAFPPSEQDTPQPILIG
HSFGGAILLKLLEQPTPSPLRGVAFLCSVPPSGNGPMTARFLKRDFILAL
KIVLGFVAKKGAEWDWLCQELFFSPSLPPDLLRKYKKRLKKDSVVGIDVK
DFLKELPVLRADGATGQGRWVKEVPSRLVIGAERDKLVDKEGVEETARFV
DAEPPVFLPTAHDAMLDPEWRLAANALLQWLNAMDQAVKK back to topmRNA from alignment at CM002455.1:391399..393423- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna152 ID=rna152|Name=rna152|organism=Nannochloropsis gaditana|type=mRNA|length=2025bp|location=Sequence derived from alignment at CM002455.1:391399..393423- (Nannochloropsis gaditana)
CTACGGAGACAAGCGCTCAAAACCTGGCCTCAACCAGCCTGGAAAACAAA
GGACTTGACAGGCATGAATTTCTCTACCACACCACGTACAGGTCCTCTGG
TCCTTGGCGAGCCCGGGAGTCTCAGAGGGGTGCAACTCAATTACTCCCCC
AAATAGAGGACATTAAGTCACAGCTTCGACAATTTTGACGTTTCTGACGC
GTTACAGGGCTATAGTAATGGGCAATCGCGCGTACGGGAGAGTTTTGCGC
CGAAGAGAAGCCATTTTTGCGACCAGGTATGTACTTTTGTGGCTTTGGAA
CTTGATCTGACGAGGGATGCGAGAACTAGCGTATACGATAAAGCTCGAAT
CACATTTTAAATCTCTTCTGCCGTATTCGGCTTGGTGATCAATGTGAAAA
CATTTTGAGCGGGAGAGCGGGCAACATTTCTTCAATTCGTTTATTTTTTT
TCCAATTTCTAACTTGCATTTGTGCAGGAACCTCCTATCCTCATGTCTCG
TCGCCTTCTTTCTTCTACGTTGCAACGATGGGAATGTTCAAGCGTTTCAA
AGTGTAATACCTCTTAAATCTTCACGAGGCATCATACTTTCCGCTGCACC
TCAAAGCTCTGTACCTGCCCCAATCGGAGTCACCGCGGAGACGGTCACCT
TCCCTAATACGGGGTTGTCCATGGAGGTCCTCAGCGCCAAATCACACTCC
TCGTCCTCGTCCGGTCCCGACAACATACTGGCAGCCTTGTCTTCATTTTT
TTGGCCCAAAGTCCGCCGTAAGCAACCGCTGGTTTTCATCCACGGATCTT
TTCATTCTGCCTGGTGTTGGGCCGAGCATTTCCTTCCCTTTTTTGCAGCA
CGAGGATATGACAGCTACGCTATCTCCTGTCGGGGCACCTTTCCTTCTCC
GTCACCCAATCAAGAAGCAAGTATAACCATCAATACCCACGCGGCAGATC
TGCGAGACTTTCTGAGGGTTGCCTTCCCTCCTAGCGAGCAAGACACCCCT
CAACCGATCCTCATTGGTCACTCGTTTGGCGGAGCCATCCTCCTCAAACT
GCTTGAGCAGCCCACCCCCTCGCCACTGAGGGGCGTCGCTTTTCTGTGTT
CCGTTCCTCCCTCTGGAAATGGTCCGATGACTGCTCGCTTTCTCAAGAGA
GATTTCATCCTCGCGCTGAAAATCGTCTTGGGCTTTGTGGCCAAGAAAGG
GGCAGAGTGGGACTGGCTGTGTCAAGAGCTCTTCTTCAGCCCCTCGCTTC
CTCCTGACTTACTTCGAAAGTACAAAAAGAGGCTGAAGAAGGACTCTGTG
GTCGGCATCGATGTTAAGGATTTCCTCAAGGAACTGCCGGTCTTGCGCGC
GGACGGGGCGACAGGGCAGGGCCGATGGGTGAAGGAAGTCCCGTCTCGTC
TCGTGATCGGTAGGGGGGAGGATTGTCTTGAATATTTGGAAAGAGGTCTC
GTTACCCGGACACTCGACAGCTTGTTGATGGCATAATCTAGATTCGAATC
AAAAGTTGCGTGATGGTCTGCAGTTATCACCAGGCATGTGAGGAGGCTTC
CCTGAGCGTGGGACCTAATAGATCCTGCATTTTTATTTCCCTTCCCGAGC
ACTTTTATTTCCCTTCCCGAGGAGTGTCTCCCTCGACTGTGGTCGGCGTT
CTGTTTTATCTTCGCGCTTCTCGCTGACAAGTTTCCTTGTTTTCTTCTCG
ACGCAGGGGCGGAACGCGACAAGCTTGTGGACAAAGAAGGTGTGGAGGAA
ACGGCACGATTCGTAGATGCAGAACCACCAGTCTTTCTTCCAACGGCGCA
CGATGCCATGCTGGATCCAGAATGGCGTCTTGCGGCCAATGCTTTGCTGC
AGTGGTTGAATGCAATGGATCAGGCGGTCAAGAAGTAAAGTACTTGGGAA
ACCCCAAATCGAGCTTGAACGGCGGATAAAGTCATAAAATAACGTGCCCC
ACTGTTTGAATAAGACTCCCCCTTCTCAACTGGTAGGAAAATGATGAAAG
ATTTTTTATTTTGTTACAAAAACAT back to topCoding sequence (CDS) from alignment at CM002455.1:391399..393423- >rna152 ID=rna152|Name=rna152|organism=Nannochloropsis gaditana|type=CDS|length=3519bp|location=Sequence derived from alignment at CM002455.1:391399..393423- (Nannochloropsis gaditana)
GGGCGGAACGCGACAAGCTTGTGGACAAAGAAGGTGTGGAGGAAACGGCA
CGATTCGTAGATGCAGAACCACCAGTCTTTCTTCCAACGGCGCACGATGC
CATGCTGGATCCAGAATGGCGTCTTGCGGCCAATGCTTTGCTGCAGTGGT
TGAATGCAATGGATCAGGCGGTCAAGAAGTAAGAACCTCCTATCCTCATG
TCTCGTCGCCTTCTTTCTTCTACGTTGCAACGATGGGAATGTTCAAGCGT
TTCAAAGTGTAATACCTCTTAAATCTTCACGAGGCATCATACTTTCCGCT
GCACCTCAAAGCTCTGTACCTGCCCCAATCGGAGTCACCGCGGAGACGGT
CACCTTCCCTAATACGGGGTTGTCCATGGAGGTCCTCAGCGCCAAATCAC
ACTCCTCGTCCTCGTCCGGTCCCGACAACATACTGGCAGCCTTGTCTTCA
TTTTTTTGGCCCAAAGTCCGCCGTAAGCAACCGCTGGTTTTCATCCACGG
ATCTTTTCATTCTGCCTGGTGTTGGGCCGAGCATTTCCTTCCCTTTTTTG
CAGCACGAGGATATGACAGCTACGCTATCTCCTGTCGGGGCACCTTTCCT
TCTCCGTCACCCAATCAAGAAGCAAGTATAACCATCAATACCCACGCGGC
AGATCTGCGAGACTTTCTGAGGGTTGCCTTCCCTCCTAGCGAGCAAGACA
CCCCTCAACCGATCCTCATTGGTCACTCGTTTGGCGGAGCCATCCTCCTC
AAACTGCTTGAGCAGCCCACCCCCTCGCCACTGAGGGGCGTCGCTTTTCT
GTGTTCCGTTCCTCCCTCTGGAAATGGTCCGATGACTGCTCGCTTTCTCA
AGAGAGATTTCATCCTCGCGCTGAAAATCGTCTTGGGCTTTGTGGCCAAG
AAAGGGGCAGAGTGGGACTGGCTGTGTCAAGAGCTCTTCTTCAGCCCCTC
GCTTCCTCCTGACTTACTTCGAAAGTACAAAAAGAGGCTGAAGAAGGACT
CTGTGGTCGGCATCGATGTTAAGGATTTCCTCAAGGAACTGCCGGTCTTG
CGCGCGGACGGGGCGACAGGGCAGGGCCGATGGGTGAAGGAAGTCCCGTC
TCGTCTCGTGATCGATGGGCAATCGCGCGTACGGGAGAGTTTTGCGCCGA
AGAGAAGCCATTTTTGCGACCAGGGGCGGAACGCGACAAGCTTGTGGACA
AAGAAGGTGTGGAGGAAACGGCACGATTCGTAGATGCAGAACCACCAGTC
TTTCTTCCAACGGCGCACGATGCCATGCTGGATCCAGAATGGCGTCTTGC
GGCCAATGCTTTGCTGCAGTGGTTGAATGCAATGGATCAGGCGGTCAAGA
AGTAAGAACCTCCTATCCTCATGTCTCGTCGCCTTCTTTCTTCTACGTTG
CAACGATGGGAATGTTCAAGCGTTTCAAAGTGTAATACCTCTTAAATCTT
CACGAGGCATCATACTTTCCGCTGCACCTCAAAGCTCTGTACCTGCCCCA
ATCGGAGTCACCGCGGAGACGGTCACCTTCCCTAATACGGGGTTGTCCAT
GGAGGTCCTCAGCGCCAAATCACACTCCTCGTCCTCGTCCGGTCCCGACA
ACATACTGGCAGCCTTGTCTTCATTTTTTTGGCCCAAAGTCCGCCGTAAG
CAACCGCTGGTTTTCATCCACGGATCTTTTCATTCTGCCTGGTGTTGGGC
CGAGCATTTCCTTCCCTTTTTTGCAGCACGAGGATATGACAGCTACGCTA
TCTCCTGTCGGGGCACCTTTCCTTCTCCGTCACCCAATCAAGAAGCAAGT
ATAACCATCAATACCCACGCGGCAGATCTGCGAGACTTTCTGAGGGTTGC
CTTCCCTCCTAGCGAGCAAGACACCCCTCAACCGATCCTCATTGGTCACT
CGTTTGGCGGAGCCATCCTCCTCAAACTGCTTGAGCAGCCCACCCCCTCG
CCACTGAGGGGCGTCGCTTTTCTGTGTTCCGTTCCTCCCTCTGGAAATGG
TCCGATGACTGCTCGCTTTCTCAAGAGAGATTTCATCCTCGCGCTGAAAA
TCGTCTTGGGCTTTGTGGCCAAGAAAGGGGCAGAGTGGGACTGGCTGTGT
CAAGAGCTCTTCTTCAGCCCCTCGCTTCCTCCTGACTTACTTCGAAAGTA
CAAAAAGAGGCTGAAGAAGGACTCTGTGGTCGGCATCGATGTTAAGGATT
TCCTCAAGGAACTGCCGGTCTTGCGCGCGGACGGGGCGACAGGGCAGGGC
CGATGGGTGAAGGAAGTCCCGTCTCGTCTCGTGATCGATGGGCAATCGCG
CGTACGGGAGAGTTTTGCGCCGAAGAGAAGCCATTTTTGCGACCAGGGGC
GGAACGCGACAAGCTTGTGGACAAAGAAGGTGTGGAGGAAACGGCACGAT
TCGTAGATGCAGAACCACCAGTCTTTCTTCCAACGGCGCACGATGCCATG
CTGGATCCAGAATGGCGTCTTGCGGCCAATGCTTTGCTGCAGTGGTTGAA
TGCAATGGATCAGGCGGTCAAGAAGTAAGAACCTCCTATCCTCATGTCTC
GTCGCCTTCTTTCTTCTACGTTGCAACGATGGGAATGTTCAAGCGTTTCA
AAGTGTAATACCTCTTAAATCTTCACGAGGCATCATACTTTCCGCTGCAC
CTCAAAGCTCTGTACCTGCCCCAATCGGAGTCACCGCGGAGACGGTCACC
TTCCCTAATACGGGGTTGTCCATGGAGGTCCTCAGCGCCAAATCACACTC
CTCGTCCTCGTCCGGTCCCGACAACATACTGGCAGCCTTGTCTTCATTTT
TTTGGCCCAAAGTCCGCCGTAAGCAACCGCTGGTTTTCATCCACGGATCT
TTTCATTCTGCCTGGTGTTGGGCCGAGCATTTCCTTCCCTTTTTTGCAGC
ACGAGGATATGACAGCTACGCTATCTCCTGTCGGGGCACCTTTCCTTCTC
CGTCACCCAATCAAGAAGCAAGTATAACCATCAATACCCACGCGGCAGAT
CTGCGAGACTTTCTGAGGGTTGCCTTCCCTCCTAGCGAGCAAGACACCCC
TCAACCGATCCTCATTGGTCACTCGTTTGGCGGAGCCATCCTCCTCAAAC
TGCTTGAGCAGCCCACCCCCTCGCCACTGAGGGGCGTCGCTTTTCTGTGT
TCCGTTCCTCCCTCTGGAAATGGTCCGATGACTGCTCGCTTTCTCAAGAG
AGATTTCATCCTCGCGCTGAAAATCGTCTTGGGCTTTGTGGCCAAGAAAG
GGGCAGAGTGGGACTGGCTGTGTCAAGAGCTCTTCTTCAGCCCCTCGCTT
CCTCCTGACTTACTTCGAAAGTACAAAAAGAGGCTGAAGAAGGACTCTGT
GGTCGGCATCGATGTTAAGGATTTCCTCAAGGAACTGCCGGTCTTGCGCG
CGGACGGGGCGACAGGGCAGGGCCGATGGGTGAAGGAAGTCCCGTCTCGT
CTCGTGATCGATGGGCAATCGCGCGTACGGGAGAGTTTTGCGCCGAAGAG
AAGCCATTTTTGCGACCAG back to top
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