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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100033g32.8395.mrna |
| Orig protein id | gnl|cribi|Naga_100033g32.8395 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:289551..291688 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna108 ID=rna108|Name=rna108|organism=Nannochloropsis gaditana|type=mRNA|length=1677bp
GCGCTTTGGACCTTCATCCCCTCCAGTCTTGCACATCGACAGGGCTTCAC
TTTTGGGGGAAACTCCCTGTCAAATGTGCCGGTACTGGTACTCGTCCACA
GTGGTGCTGGTTTCGTCTTTTAGTCTACTATACCCTTTCACCGCCCTGAG
CTCGCCTCAGTCAGGAAGAGTCCCGGCGTCTAGCAAGGGTTTCAAGCCCA
CGTCCTCCTCAGAACACAGCACGGCTTCAAAGACAAACATGGCCTGCCCA
ATTGAAGAAGACGTAGCACTGTCGTCACGACGGTGCGCGGGGGCGCGGTA
TCTCTTCGAAGACGTGGTTCGTGACCCGCTGGCGCCCATTCTAGCCGGGG
AGGAAATCATCGCCAGCGAACGCATAAACAAGGCCAAAAATGCCGTCTAT
CCTGTGGTGGCCATCCGAACGCGCTGGATTGACGATAAAATTGAGGAAGC
TTTCAGCCTGGACCCGACCCTGACGCAAGTCGTACTTTGCGGCGCCGGTA
TGGACGCACGGGGGTAAGTGAAGCCGACTTCAACGACAGCGGAAGCGCCT
TGAAATAAATTTAGGGTGAATGAGCGACAGCGTCGGTTTAAGTCGCTAAG
AGATTGGTAGGAATATTTATCTGTGCTGCTCATAATGAGCTGAATTCCTC
AAATTTTTGGTCGTTGCAGGTTGTACTTCTGGCAGACGAACCCTAACCAT
ATACCACCTGGCATGACCCTTTTCCAACTTCTATTCAATAGCTACCGGCT
GGAACAAATGAAGAAGTGCCAAATTTACGAGCTGGACGTAAAACCAGTCC
TCGACTACAAGACATCGGTTCTGGCCGGGGTGGCGGATCGTTTCCCGTTG
CTGGCTCGGAGCGTGCATCGTCTCATTAGCGACTTTGCCGACGACGTGCA
CTGGGTGCGCCAGCTCAAGGAGGCCGGATTCGACCCCGAGAAGAAGACGG
TGTGGATCCTTGAGGGCTTTCTTTACTACTTCCCAGAACCTCGAGTCCAG
ACCATGTTGGGCGTAATTCGAGCGCTGTCCTCCCCGGGGAGCCTCCTCCT
CGCCGATCATGTCAATGACTTTACTCTTGCCTCCCTCCGCGCGCAAGCCG
GCGACAAGTGGCTGACCAGCACTTTTTCCTCGGCTATGGAGGAGCCCGAG
ACTACCCTGTCCACCTTGGGGTTTGAAGAGGTGGAGGTGGTGACCGTGGG
AGAGAACGGGGCTCATTACGGTCTTTGGGCCCTCCCGGTGGCGCCTCGTG
CGGAGAAAAAGGACGTCATGCGAACGTATCTGATCCGCGCTACCGTGGGC
AGCAAGTCATGAGACGTACCACGACTTGATCGTGCATAGGTGACTTTCGC
GATCAGTTGAAACGCAGGAAACGGGGCAGTGGAGGAACGGCAGTCCCCGG
TGGGAAGCTGTGGTGTGCTCGCTGTGTGAATAGGAACATGTGGCGCGTCA
ACGTCACGTATGTGTATATCTATATATGGCAGGTCAGCAATCTTTTTTTT
TCCAGTTGTCAAGGCATTGTACAGTTTGTCGGTGGTGTGCTCCCCTGCGT
CCATCGCACATTGGGTTTTGTGCGTGCCGACACCACTCAGGTGTGGAGTA
ATACCCATTGCGCGACGCCTCTCCGGGGGACTGACACAGAAGAATCATAG
TCCTCAGAAATTATACCTTTGACAGTA back to topprotein sequence of rna108 >rna108-protein ID=rna108-protein|Name=rna108|organism=Nannochloropsis gaditana|type=polypeptide|length=519bp
MVWKSAEGPTSAGAPLTPEIICIDDSDDERDVATSAQAPSSSSAAGAAEI
PAASPVTAHRRDPLRSEPGNLPHPHHGSNQGAIKDTNGRPSSGSSLSFMA
YMRGTTGGVNPFAGASAAAASQLCSGAAGGGGAMGGFNGSEREDLAQLRV
LGLSEMGTFSNRTGEPEGDKPFPLGGVGRPPDMPDGPKRPHNGHACPGKA
DKEGESEYEKRLRADEKGEGVAGTREVKKERERRPIQATARELEAARDLQ
AKTGMGIEEGLTALRANNFDPEKAVMWYVEASQQGGMEMALVHHASIESE
RLNDEYRRAEMRKQEELMKEGDVIGSAKFAASTLLAEEDGSRAVHAFLRR
YCSRGGGRRGRSRGHEEASVARRRELVVKLLIKEKEAVRFYKAAAHGYMK
ALAKRLDGAAGGGGEGEEGKEDEGGQLPLTCLEHEAMALENALTKYPEGN
VGGVPVQFLKYASPASDFEEDGLEVVGEGGREEGGGNHQAGNGGGAGVAE
GKEGKKRTGVVECIEILED back to topmRNA from alignment at CM002455.1:289551..291688+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna108 ID=rna108|Name=rna108|organism=Nannochloropsis gaditana|type=mRNA|length=2138bp|location=Sequence derived from alignment at CM002455.1:289551..291688+ (Nannochloropsis gaditana)
AGCGACTGCCGGTGCCAGAGCACTCGGCGGGGTCAATGACTTCGATATCA
CGCTGGGTGAAAGCATGGAGTCCATTACGCGTCGTGAGATTGATTTTTGC
CGCGGAAGCAGTGTGGGCGTGGTCATTGTTTGCCTGCAATGCTGCCTAGT
GGTGTCATGCTCATTTCACGTTCGATTGTTTATCCCACTAAACAGGCTGC
TTGCTGCTTCCCGTCAGCCTGAGTTAGCGGATTAGAACAAAGCGGTGGGC
GGAAGTCCCAAATCTGCTGCCTTGTCCAGGGCGAATTGAGGGTAAAATAA
GTTCAAGACCCTTATTTTCCTAGCTACTCCTCTGCGAAAAGGAGCTCCCC
CACTGTGATGGTCTGGAAAAGTGCTGAAGGTCCCACCTCTGCTGGAGCCC
CCCTAACCCCGGAAATCATCTGCATCGACGACTCGGACGACGAACGGGAC
GTAGCCACCTCGGCACAGGCACCAAGCTCTTCCAGTGCGGCTGGGGCGGC
AGAAATTCCTGCGGCATCCCCTGTGACAGCCCATCGGAGAGACCCCCTTC
GTAGTGAACCTGGCAACCTTCCACATCCCCATCATGGCAGCAATCAGGGC
GCCATCAAAGATACGAATGGCAGACCGAGCAGCGGAAGCAGTCTGAGCTT
CATGGCGTATATGCGCGGGACAACGGGGGGTGTCAACCCCTTTGCTGGCG
CCTCCGCCGCGGCGGCTTCCCAATTATGCTCTGGggcagcggggggagga
ggggcgatgGGAGGGTTCAACGGCTCGGAACGGGAGGATCTGGCACAGTT
ACGGGTACTGGGGCTCTCGGAGATGGGGACTTTCTCGAACAGGACCGGAG
AACCTGAGGGGGACAAGCCGTTTCCGCTAGGAGGGGTTGGGCGGCCCCCA
GACATGCCTGACGGGCCCAAGAGACCCCACAATGGCCACGCATGTCCGGG
CAAAgcggacaaggaaggagaaagcgagTACGAGAAACGCCTGCGGGCgg
acgagaaaggggaaggtgtGGCGGGCACGAGAGAGGTCAAGAAAGAACGG
GAGCGTCGGCCGATCCAAGCGACGGCCCGCGAGTTGGAGGCAGCTCGGGA
CTTGCAGGCAAAGACGGGGATGGGGATCGAGGAGGGTTTGACGGCCCTCC
GAGCCAACAATTTCGACCCCGAGAAGGCCGTGATGTGGTACGTGGAGGCG
TCGCAGCAGGGTGGGATGGAGATGGCTCTCGTCCATCATGCCTCTATCGA
GAGCGAGCGCCTAAACGACGAATACCGGCGCGCGGAAATGCGGAAACAGG
AGGAGCTcatgaaggaaggagacgtgATAGGGAGTGCAAAATTTgccgcc
tccacgctcttggcggaagaggatggcaGTAGGGCCGTGCACGCCTTTCT
CAGGCGGTACTGCAgcagggggggtgggaggaggggccggtcGCGGGGAC
ACGAGGAGGCCAGCGTTGCGCGGCGACGGGAGTTGGTGGTCAAGCTCCTg
atcaaggagaaggaagccgTCAGATTCTACAAGGCCGCGGCGCATGGCTA
CATGAAGGCTTTGGCGAAGCGGCTGGATGGGGccgccgggggaggaggcg
aaggggaggaagggaaggaggacgagggagggcaactGCCGTTGACGTGC
TTGGAACATGAAGCGATGGCGCTGGAGAATGCGCTTACCAAGTATCCGGA
GGGCAATGTGGGAGGGGTTCCTGTACAGTTTTTGAAATACGCGTCCCCGG
CATCGGATTTCGAGGAAGATGGCTTGGAGGtcgtgggggaagggggacgg
gaggaggggggggggaatcaTCAAGCGggaaatgggggaggggcaggggt
ggcggaaggaaaggaggggaaaaaaaggacaggTGTGGTCGAGTGCATCG
AGATACTGGAGGATTGAGGCAAGTCTCGAGCTCGTGCGCGTGGATGGAAG
GCAGGACTGTGCATATACGTAGAAAGGACTGTGGTCGGCGCAATTTTTTG
CACTGGCTGTTTGAATACTTACTTGCATGCAGCGACATGAACATAAAGGA
GGGGTCAGAGCAGAGGCTGAAAGCGTGCAGTTTTGCTCTTAAATCTGGCA
GTCCCGGCAAATTTTGGAACCAAGGAGCCATACCATCG back to topCoding sequence (CDS) from alignment at CM002455.1:289551..291688+ >rna108 ID=rna108|Name=rna108|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at CM002455.1:289551..291688+ (Nannochloropsis gaditana)
ATGGTCTGGAAAAGTGCTGAAGGTCCCACCTCTGCTGGAGCCCCCCTAAC
CCCGGAAATCATCTGCATCGACGACTCGGACGACGAACGGGACGTAGCCA
CCTCGGCACAGGCACCAAGCTCTTCCAGTGCGGCTGGGGCGGCAGAAATT
CCTGCGGCATCCCCTGTGACAGCCCATCGGAGAGACCCCCTTCGTAGTGA
ACCTGGCAACCTTCCACATCCCCATCATGGCAGCAATCAGGGCGCCATCA
AAGATACGAATGGCAGACCGAGCAGCGGAAGCAGTCTGAGCTTCATGGCG
TATATGCGCGGGACAACGGGGGGTGTCAACCCCTTTGCTGGCGCCTCCGC
CGCGGCGGCTTCCCAATTATGCTCTGGggcagcggggggaggaggggcga
tgGGAGGGTTCAACGGCTCGGAACGGGAGGATCTGGCACAGTTACGGGTA
CTGGGGCTCTCGGAGATGGGGACTTTCTCGAACAGGACCGGAGAACCTGA
GGGGGACAAGCCGTTTCCGCTAGGAGGGGTTGGGCGGCCCCCAGACATGC
CTGACGGGCCCAAGAGACCCCACAATGGCCACGCATGTCCGGGCAAAgcg
gacaaggaaggagaaagcgagTACGAGAAACGCCTGCGGGCggacgagaa
aggggaaggtgtGGCGGGCACGAGAGAGGTCAAGAAAGAACGGGAGCGTC
GGCCGATCCAAGCGACGGCCCGCGAGTTGGAGGCAGCTCGGGACTTGCAG
GCAAAGACGGGGATGGGGATCGAGGAGGGTTTGACGGCCCTCCGAGCCAA
CAATTTCGACCCCGAGAAGGCCGTGATGTGGTACGTGGAGGCGTCGCAGC
AGGGTGGGATGGAGATGGCTCTCGTCCATCATGCCTCTATCGAGAGCGAG
CGCCTAAACGACGAATACCGGCGCGCGGAAATGCGGAAACAGGAGGAGCT
catgaaggaaggagacgtgATAGGGAGTGCAAAATTTgccgcctccacgc
tcttggcggaagaggatggcaGTAGGGCCGTGCACGCCTTTCTCAGGCGG
TACTGCAgcagggggggtgggaggaggggccggtcGCGGGGACACGAGGA
GGCCAGCGTTGCGCGGCGACGGGAGTTGGTGGTCAAGCTCCTgatcaagg
agaaggaagccgTCAGATTCTACAAGGCCGCGGCGCATGGCTACATGAAG
GCTTTGGCGAAGCGGCTGGATGGGGccgccgggggaggaggcgaagggga
ggaagggaaggaggacgagggagggcaactGCCGTTGACGTGCTTGGAAC
ATGAAGCGATGGCGCTGGAGAATGCGCTTACCAAGTATCCGGAGGGCAAT
GTGGGAGGGGTTCCTGTACAGTTTTTGAAATACGCGTCCCCGGCATCGGA
TTTCGAGGAAGATGGCTTGGAGGtcgtgggggaagggggacgggaggagg
ggggggggaatcaTCAAGCGggaaatgggggaggggcaggggtggcggaa
ggaaaggaggggaaaaaaaggacaggTGTGGTCGAGTGCATCGAGATACT
GGAGGATTGA back to top
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