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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr9 | genome | chr9:544576..547102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO09G01750.2 vs.
Match: XP_005853612.1 (hypothetical protein NGA_0424800 [Nannochloropsis gaditana CCMP526]; EKU22751.1 hypothetical protein NGA_0424800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 311.6 bits (797), Expect = 3.700e-81 Identity = 165/209 (78.95%), Postives = 183/209 (87.56%), Query Frame = 0
Query: 15 RSSSASLEEDDPDVIPFLASTRVKRGSALTSSGAGGVLATLAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTALKKARLLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVAKKLKKGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFSMFLVGMTFLHFKMKNTYMIMYWG 224
RSS+ASLE DDPDVIPFLASTR KRG ALTS G GG+L TLA+RAGKALV SSAFRFVAEEK+FETV GMLAYR+AFQWSKD+TA +KARLLFTLY+CLYLGALLYSRQQAI QD RTLKVAA+PA+LSS D+AKK+KKGE G + GL GLA PQEKEMTF++YDLGQ+K+ALDRFS+FLVGMTFLHFKMKNTYMIMYWG
Sbjct: 114 RSSTASLE-DDPDVIPFLASTRFKRGEALTSQGGGGLLFTLARRAGKALVGSSAFRFVAEEKIFETVAGMLAYRIAFQWSKDSTATRKARLLFTLYVCLYLGALLYSRQQAIAQQDARTLKVAAVPAVLSSLLDMAKKMKKGESPGG------LPGLAGLARPQEKEMTFRDYDLGQIKAALDRFSLFLVGMTFLHFKMKNTYMIMYWG 315
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G01750.2 ID=NO09G01750.2|Name=NO09G01750.2|organism=Nannochloropsis oceanica|type=mRNA|length=2335bp
CCACATTTTCTGACAGGCACTGAAGGCTTGTGGTTTTGCCAAAATATGGG
CTCCCCAAGAGGAGGAATCGTCTCCACCGCAGGTTGCAGCACGAAGACGA
ACAACAGCAGTCGACGACGGACCAGCTTCATGGTGCTGCTCCTGGTGATC
GTGGGGGCCGTGCTGACAACAACACAAGCAAGACCAGCTGCAGATGTGGG
GAGCAGCAGGCCACCATCTTCTACAGCGGCCAGGAAACGCGCAGCATTGC
TCAAGGCCACCTCAAGTAGCAAGGTGAGTATGGGGAGATATGACGCACAT
TTTTGGGTGAAAAGGATGCCAACCTGATGAGACAGGAATGCTCGAGATGA
TAGAGATGAGCGCGAGCAAGCTTTCTGCCTCGGATGATTGGGTCGTCCAG
CAGTTGCGTCACGAGCCTCGAATGCCTGGTGCAGGCATGAATGTTCGTTC
TCACGCTATGGCTCACTTCTCTTTCCACCGCTACTTGTTTCTATACTTTG
TTATCCCATCTATGATGCCTTCAATTGCTTGTACATGTTGATAACTACTT
GCTTTGGCGGGATCGGTGTTTCTCAGCGCTCCAGGAGGCGCGCCACACTT
GCGCTTCTGACTTCCCACCACCATCCCATTGCCTAGCTAACTCCTTTTCC
CTCTCCCCCCGTCGTATTCGCAGAAGAAGCAGCCCAAACGCGACGACGAA
GATGAATCAACAGGCTCTTCCAAGCTCGACCGCATGCCAATAGTCGCCGC
TGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTCCTCCGCCTCCCTAGAAG
AGGACGACCCGGATGTCATCCCTTTCTTGGCCAGCACTCGCGTTAAACGT
GGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGAGTATTGGCCACCCTCGC
TAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTCTGCCTTTCGCTTCGTTG
CAGAAGAGAAGCTGTTTGAGACGGTCATCGGTATGCTCGCCTACCGGGTC
GCATTCCAATGGAGCAAAGACACCACGGCCTTGAAGAAGGCTCGGTTGTT
ATTCACGTTGTACATATGCTTGTATTTGGGTGCCCTGCTATATTCTAGAC
AGCAGGCTATCGAGCTGCAGGACACACGAACATTGAAGGTAGCGGCCATG
CCAGCCATGCTTTCTTCCTTCTTCGACGTGGCAAAGAAGCTGAAAAAGGG
CGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCTTATGGGAGGCCTGCAGG
GACTGGCTTCCCCACAAGAGAAGGAGATGACGTTTAAGGAGTATGATTTG
GGACAGGTCAAGAGCGCCCTGGACCGTTTTTCCATGTTCTTGGTGGGGAT
GACGTTTTTGCATTTCAAGATGAAGAACACGTACATGATTATGTACTGGG
GAATCCTCGGGCCTATCATGATGCTGCGCGAGCCATTGTTTCAAGTACAT
ATTTTTGGGATGGAGGAAACGGGAATAAGGCTGAGGCCATTTGGGCCGAA
GGACGAGCCTGAGGAAGTGGAGGATGGGGAGGGGGAGGAAGGTGGGGAGG
AGGGGGCAGAGACGGTCAAGGGGGAAGGAGGAGATGAGGAGGGGAGGGGG
GACGAAGAGGCAGGGGAGGAAGCGGAGCCCGGGGCAACGGAGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGAAGTTGAAAAAGAAGAAGAAGAAGAAGAAG
AAGAAGAGGAAGAGGAGGGAGAAGAAATAGAAGAGGAAGACATAGGAGAA
GAGCTAGAGGAGGAGGTGGTTGAAGTGGAGGAGGAGGACGAGGGGGAAGA
GGAGGAGAAAGAAGAAGAAGAAGAAGAGGAAGTCCCCGTTCGAAATAAGG
CGGAGGGGGGCGAAGGGAAGGAGGGTGACATTGCGAGTGATCATGCCCTG
AAGGAGCACCCGGGGCAATTCCGGGTGAAGAAATTGGAGGAAGACGTGCA
TCCCCATGCGGGGGACAAGAAGAGTGATATGACCCCGTCGGAGTTTTGTG
TGGAGAAGGAGGAGTAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGCAC
AGGACGGTCTGTTTTTGTTTTTTTAAGAAGGACAAGGAATGGGGGCCTGT
GCATAACAATGGTAAGAAGAACAAGGCGAAGGAGGCGAAGGAGGAGAGAA
TGAATAGGGATAAGAACAAGCTTGCTTCATCGATAAATTGGAGAATTTTA
AAAACGTGAGGACGTGAGGGATGGCGAGGGAAAAATAAGAAATAACGTCT
CAGCTTTGATTGCCCCACGCAGATTAGGATCCTTCCCGCCAAAAGAAACA
ACGACTCGAAGAAAAGGAAAAATATCTGACGGAAG back to topprotein sequence of NO09G01750.2 >NO09G01750.2-protein ID=NO09G01750.2-protein|Name=NO09G01750.2|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MPIVAAAAKRSKKRRSSSASLEEDDPDVIPFLASTRVKRGSALTSSGAGG
VLATLAKRAGKALVASSAFRFVAEEKLFETVIGMLAYRVAFQWSKDTTAL
KKARLLFTLYICLYLGALLYSRQQAIELQDTRTLKVAAMPAMLSSFFDVA
KKLKKGEGMGEAGVGGLMGGLQGLASPQEKEMTFKEYDLGQVKSALDRFS
MFLVGMTFLHFKMKNTYMIMYWGILGPIMMLREPLFQVHIFGMEETGIRL
RPFGPKDEPEEVEDGEGEEGGEEGAETVKGEGGDEEGRGDEEAGEEAEPG
ATEEEEEEEEEEEVEKEEEEEEEEEEEEGEEIEEEDIGEELEEEVVEVEE
EDEGEEEEKEEEEEEEVPVRNKAEGGEGKEGDIASDHALKEHPGQFRVKK
LEEDVHPHAGDKKSDMTPSEFCVEKEE* back to topmRNA from alignment at chr9:544576..547102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G01750.2 ID=NO09G01750.2|Name=NO09G01750.2|organism=Nannochloropsis oceanica|type=mRNA|length=2527bp|location=Sequence derived from alignment at chr9:544576..547102- (Nannochloropsis oceanica)
CCACATTTTCTGACAGGCACTGAAGGCTTGTGGTTTTGCCAAAATATGGG
CTCCCCAAGAGGAGGAATCGTCTCCACCGCAGGTTGCAGCACGAAGACGA
ACAACAGCAGTCGACGACGGACCAGCTTCATGGTGCTGCTCCTGGTGATC
GTGGGGGCCGTGCTGACAACAACACAAGCAAGACCAGCTGCAGATGTGGG
GAGCAGCAGGCCACCATCTTCTACAGCGGCCAGGAAACGCGCAGCATTGC
TCAAGGCCACCTCAAGTAGCAAGGTGAGTATGGGGAGATATGACGCACAT
TTTTGGGTGAAAAGGATGCCAACCTGATGAGACAGGAATGCTCGAGATGA
TAGAGATGAGCGCGAGCAAGCTTTCTGCCTCGGATGATTGGGTCGTCCAG
CAGTTGCGTCACGAGCCTCGAATGCCTGGTGCAGGCATGAATGTTCGTTC
TCACGCTATGGCTCACTTCTCTTTCCACCGCTACTTGTTTCTATACTTTG
TTATCCCATCTATGATGCCTTCAATTGCTTGTACATGTTGATAACTACTT
GCTTTGGCGGGATCGGTGTTTCTCAGCGCTCCAGGAGGCGCGCCACACTT
GCGCTTCTGACTTCCCACCACCATCCCATTGCCTAGCTAACTCCTTTTCC
CTCTCCCCCCGTCGTATTCGCAGAAGAAGCAGCCCAAACGCGACGACGAA
GATGAATCAACAGGCTCTTCCAAGCTCGACCGCATGCCAATAGTCGCCGC
TGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTCCTCCGCCTCCCTAGAAG
AGGACGACCCGGATGTCATCCCTTTCTTGGCCAGCACTCGCGTTAAACGT
GGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGAGTATTGGCCACCCTCGC
TAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTCTGCCTTTCGCTTCGTTG
CAGAAGAGAAGCTGTTTGAGACGGTCATCGGTATGCTCGCCTACCGGGTC
GCATTCCAATGGAGCAAAGACACCACGGCCTTGAAGAAGGCTCGGTTGTT
ATTCACGTTGTACATATGCTTGTATTTGGGTGCCCTGCTATATTCTAGAC
AGCAGGCTATCGAGCTGCAGGACACACGAACATTGAAGGTAGCGGCCATG
CCAGCCATGCTTTCTTCCTTCTTCGACGTGGCAAAGAAGCTGAAAAAGGG
CGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCTTATGGGAGGCCTGCAGG
GACTGGCTTCCCCACAAGAGAAGGAGATGACGTTTAAGGAGTATGATTTG
GGACAGGTCAAGAGCGCCCTGGACCGTTTTTCCATGTTCTTGGTGGGGAT
GACGTTTTTGCATTTCAAGATGAAGAACACGTACATGATTATGTACTGGG
GGTGCGTCTGTTTGTGTTTGTCCCTCCCTTCACCCTCCCTCCCTCCCTCC
CTCCCTCTCTCTCCCTTCCTTCCCCCATGCTCTCCTTCATCCATCCCTCT
CCCTCCATCCTCCCCTCTTGCCTTCCATGTGAGATCGGTCCGTCCTCTCA
CACCTCATCCTATTTTCCTTCCTTACTCCCCCCTTCATCTTAGAATCCTC
GGGCCTATCATGATGCTGCGCGAGCCATTGTTTCAAGTACATATTTTTGG
GATGGAGGAAACGGGAATAAGGCTGAGGCCATTTGGGCCGAAGGACGAGC
CTGAGGAAGTGGAGGATGGGGAGGGGGAGGAAGGTGGGGAGGAGGGGGCA
GAGACGGTCAAGGGGGAAGGAGGAGATGAGGAGGGGAGGGGGGACGAAGA
GGCAGGGGAGGAAGCGGAGCCCGGGGCAACGGAGGAGGAAGAGGAGGAGG
AGGAGGAGGAGGAAGTTGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAG
GAAGAGGAGGGAGAAGAAATAGAAGAGGAAGACATAGGAGAAGAGCTAGA
GGAGGAGGTGGTTGAAGTGGAGGAGGAGGACGAGGGGGAAGAGGAGGAGA
AAGAAGAAGAAGAAGAAGAGGAAGTCCCCGTTCGAAATAAGGCGGAGGGG
GGCGAAGGGAAGGAGGGTGACATTGCGAGTGATCATGCCCTGAAGGAGCA
CCCGGGGCAATTCCGGGTGAAGAAATTGGAGGAAGACGTGCATCCCCATG
CGGGGGACAAGAAGAGTGATATGACCCCGTCGGAGTTTTGTGTGGAGAAG
GAGGAGTAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGCACAGGACGGT
CTGTTTTTGTTTTTTTAAGAAGGACAAGGAATGGGGGCCTGTGCATAACA
ATGGTAAGAAGAACAAGGCGAAGGAGGCGAAGGAGGAGAGAATGAATAGG
GATAAGAACAAGCTTGCTTCATCGATAAATTGGAGAATTTTAAAAACGTG
AGGACGTGAGGGATGGCGAGGGAAAAATAAGAAATAACGTCTCAGCTTTG
ATTGCCCCACGCAGATTAGGATCCTTCCCGCCAAAAGAAACAACGACTCG
AAGAAAAGGAAAAATATCTGACGGAAG back to topCoding sequence (CDS) from alignment at chr9:544576..547102- >NO09G01750.2 ID=NO09G01750.2|Name=NO09G01750.2|organism=Nannochloropsis oceanica|type=CDS|length=1284bp|location=Sequence derived from alignment at chr9:544576..547102- (Nannochloropsis oceanica)
ATGCCAATAGTCGCCGCTGCCGCCAAGCGCAGCAAAAAACGTCGTTCTTC
CTCCGCCTCCCTAGAAGAGGACGACCCGGATGTCATCCCTTTCTTGGCCA
GCACTCGCGTTAAACGTGGAAGTGCCCTCACTTCTTCCGGTGCTGGTGGA
GTATTGGCCACCCTCGCTAAGAGGGCAGGCAAGGCATTGGTGGCTTCTTC
TGCCTTTCGCTTCGTTGCAGAAGAGAAGCTGTTTGAGACGGTCATCGGTA
TGCTCGCCTACCGGGTCGCATTCCAATGGAGCAAAGACACCACGGCCTTG
AAGAAGGCTCGGTTGTTATTCACGTTGTACATATGCTTGTATTTGGGTGC
CCTGCTATATTCTAGACAGCAGGCTATCGAGCTGCAGGACACACGAACAT
TGAAGGTAGCGGCCATGCCAGCCATGCTTTCTTCCTTCTTCGACGTGGCA
AAGAAGCTGAAAAAGGGCGAGGGGATGGGAGAAGCCGGAGTCGGTGGTCT
TATGGGAGGCCTGCAGGGACTGGCTTCCCCACAAGAGAAGGAGATGACGT
TTAAGGAGTATGATTTGGGACAGGTCAAGAGCGCCCTGGACCGTTTTTCC
ATGTTCTTGGTGGGGATGACGTTTTTGCATTTCAAGATGAAGAACACGTA
CATGATTATGTACTGGGGAATCCTCGGGCCTATCATGATGCTGCGCGAGC
CATTGTTTCAAGTACATATTTTTGGGATGGAGGAAACGGGAATAAGGCTG
AGGCCATTTGGGCCGAAGGACGAGCCTGAGGAAGTGGAGGATGGGGAGGG
GGAGGAAGGTGGGGAGGAGGGGGCAGAGACGGTCAAGGGGGAAGGAGGAG
ATGAGGAGGGGAGGGGGGACGAAGAGGCAGGGGAGGAAGCGGAGCCCGGG
GCAACGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGTTGAAAAAGA
AGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAGGGAGAAGAAATAGAAG
AGGAAGACATAGGAGAAGAGCTAGAGGAGGAGGTGGTTGAAGTGGAGGAG
GAGGACGAGGGGGAAGAGGAGGAGAAAGAAGAAGAAGAAGAAGAGGAAGT
CCCCGTTCGAAATAAGGCGGAGGGGGGCGAAGGGAAGGAGGGTGACATTG
CGAGTGATCATGCCCTGAAGGAGCACCCGGGGCAATTCCGGGTGAAGAAA
TTGGAGGAAGACGTGCATCCCCATGCGGGGGACAAGAAGAGTGATATGAC
CCCGTCGGAGTTTTGTGTGGAGAAGGAGGAGTAG back to top
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