NO08G02380.1, NO08G02380.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G02380.1
Unique NameNO08G02380.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length240
Alignment locationchr8:694295..696007 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:694295..696007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G02380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02380NO08G02380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G02380.1NO08G02380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G02380.1.cds1NO08G02380.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02380.1.cds2NO08G02380.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02380.1.cds3NO08G02380.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G02380.1.cds4NO08G02380.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G02380.1 ID=NO08G02380.1|Name=NO08G02380.1|organism=Nannochloropsis oceanica|type=mRNA|length=240bp
ATGACACATCGCCAAGGCCCGGGCTTAACATGCATGGCTATCGTGGCCGA
GGATGTCGTCGAGGTTTTCCAGCCGGGCGAACACAACAGTTATGCAATCA
TCTTGCAGTTTGCCTCCGTGCAACGGCTGCGACTGAAGGAATCGCTGACC
TGCAACAAGGCAAATAAGAACAGGTCAGCCAGCGGAGAAAAAAATGCGGC
TATTGATGCCAGTGATTCCGAGTTGTGCAGGGGAAATTAA
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protein sequence of NO08G02380.1

>NO08G02380.1-protein ID=NO08G02380.1-protein|Name=NO08G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=80bp
MTHRQGPGLTCMAIVAEDVVEVFQPGEHNSYAIILQFASVQRLRLKESLT
CNKANKNRSASGEKNAAIDASDSELCRGN*
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mRNA from alignment at chr8:694295..696007+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G02380.1 ID=NO08G02380.1|Name=NO08G02380.1|organism=Nannochloropsis oceanica|type=mRNA|length=1713bp|location=Sequence derived from alignment at chr8:694295..696007+ (Nannochloropsis oceanica)
ATGACACATCGCCAAGGCCCGGGCTTAACATGCATGGCTATCGTGGCCGA
GGATGTCGTCGAGGTTTTCCAGGTGCCCTTGGCTTGGTACATGAGGTTGT
TTGGTTGATATTTGACCAGGAAGTAAACTATAGTGCAAGCAAGCAGTCAG
AAAGAAAGAAGATCAGAGCATCGAAATGAGCGAGCACCTCTCTTGTTCTA
ATTCGATAAATTCATCTTGAACACAGAAGTGGCGCCTCTTGAGATTAACA
TCATCAAGCAATGTGGGATGTAACGGCAGAGTAAGAGAAAAAATACTGAA
GGTTGAAAAAATGTATAAACATGTAAACATATATCTACATATTGTACACA
AAGTGTAATCGTATGACCGGGAGGGATCGGAACAGATCGATTTTATAACT
GCTCATCAGCGACCAACAACCTTATGATGTGTGGCTAGTGTTTTATCTGC
TTCGGCAAATGGCAAACGGTTACGTATCCTCTGTCTCAAGCATGCATGCG
TACGGAGCAACTGTTGCTTGGTATCGCGTCTTGAGGCGTGTCATGAAAAG
AGAAAAGGATGGTCTCCTTCCTTGCTGGTACTTGCGTGCGTTAGTGCCGC
AATGCTATCAACAGGAAGCAGCGCAAGGCATACCCACGGAGGCTTTAAAG
GGAGTTAGTCAGACGAAGGATCGCAATTGGGCTGCGCTGTGTTCAGCGCA
TATAGCCTAGGGAAATTCCCCGGTAAGTGCTCTCGGGTGGGAGGGACGGG
AGGGAGTAAGTAGACCGCATGAAAGGCACAGTGAGACCATCTAGGTCCTC
ACCCCCGCACCCCACCAAACATAACTCTCGAATCGCAGGACGGATTGGGC
GAGAGGCCAGGTCTCAACGACTAAGCCCCTGGCTGTGGTGGATGGCCAAG
ACGCGGCGTGGGCACCTTTAAGTTGTCGGCGCTGGGGAGCCTCTCATTTT
TGGATGGAACCACAAGCAGCTGGGCACATTTCGTCATGGTTTGTCCGTAG
CCGGGCGAACACAACAGTTATGCAATCATCTTGCAGTTTGCCTCCGTGCA
ACGTAAGTAACAGAACGGGGATTACTCTCGCTTCTGGCCCCTTCCTTCAT
CACGGGTTGCGCTATCCTTTTTCTTGCCCGCGTGTTGCGGCCTGCACGTT
CGTATTTGACCAACGTGTCCGTGTCCCAATTTTTGTGCTGAGGATTTGCA
GTCAACATTCATTATTTTGTAGAGGCATGATGCCTGTGTGTTATTCTGGA
TGCGCGGTCCTTGCAATGTGTGTCCGTGTTTAGAGGAAGAGGGGACGCAC
TGCACCACACAATACCACAGGGCTGCGACTGAAGGAATCGCTGACCTGCA
ACAAGGCAAATAAGGTACATCAAATGAGGGGGAAAGAAAAAGTGACTGTG
AACGATGAGCCAGCAGTGAAGATGACATGATGCGTCAACCCGATGTGGAT
GCCGCCCCAGGCATACTTTAATCTCAGAGAGGAAATAAATACCTCTCTGT
TGTTATTGATGACAAACACAGGAAAATGGCAACTGATCCGTCTTTGCGCA
GCCCTAGCAAATAGAGAGTGTATCACGCGTTACATTTCCTCTTGTAATCC
GCATGTGACTAACGGTGCCCAAACCCATCGACGCAAAACAGAACAGGTCA
GCCAGCGGAGAAAAAAATGCGGCTATTGATGCCAGTGATTCCGAGTTGTG
CAGGGGAAATTAA
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Coding sequence (CDS) from alignment at chr8:694295..696007+

>NO08G02380.1 ID=NO08G02380.1|Name=NO08G02380.1|organism=Nannochloropsis oceanica|type=CDS|length=240bp|location=Sequence derived from alignment at chr8:694295..696007+ (Nannochloropsis oceanica)
ATGACACATCGCCAAGGCCCGGGCTTAACATGCATGGCTATCGTGGCCGA
GGATGTCGTCGAGGTTTTCCAGCCGGGCGAACACAACAGTTATGCAATCA
TCTTGCAGTTTGCCTCCGTGCAACGGCTGCGACTGAAGGAATCGCTGACC
TGCAACAAGGCAAATAAGAACAGGTCAGCCAGCGGAGAAAAAAATGCGGC
TATTGATGCCAGTGATTCCGAGTTGTGCAGGGGAAATTAA
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Synonyms
Publications