NO05G00010.4, NO05G00010.4 (mRNA) Nannochloropsis oceanica

Overview
NameNO05G00010.4
Unique NameNO05G00010.4
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4585
Alignment locationchr5:267..4976 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:267..4976 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO05G00010.4 vs.
Match: EWM28397.1 (sulfate permease family [Nannochloropsis gaditana])

HSP 1 Score: 1134.8 bits (2934), Expect = 0.000e+0
Identity = 649/949 (68.39%), Postives = 721/949 (75.97%), Query Frame = 0
Query:    1 MPMLAKLFILSSVVHQAAFSLVSSLPYAVGQIQDAGLIFLSKIATNIVLLLHDKPAEVVVSTTLVTLGLCTALLGITLMGLGHYKLARLVSYLPLPVIGGQIVFIAAFCFRAAVTLSVGHDLDSLQAWGRLYDPHSVVLVLPGILAGAAFSAVARSFKHFLALPLAMVCVPLVFYGGLYLGGETMDGAREFGWLGASNVPASWQSSLGLYQVWPPSSLGGIEWWVLPYQLPTLLGMIFVVSFSSCLDIVAIEMDGGRPLNKNHELSTVGLSNLIAGVCGGFTGSYIFSQTIFTYRTNTRSRLCGLVLIVAELTVFLSPIDLMTYIPLYFFAATLHFITFELMLEWLVEARCRMTPKEYLVLWATFIGSVSLGIIPGFALGIVLSMAMFIVSYAKSTARTVQAQRHRSRVVRLREARRLLDQRGKILTLELNGAIFFGSSVTTLEHIKSLLGVAPFSPQVTGNGAWAIAPMKRGKTAISAASVAHRPSRTNSRRVIEE-----GGGKVDGG---------------------SKTFHSLKSLVGEAWGRLHRSIFQSVLAKERQEDMDEDEEKAGERRTAMTLPPAEDAALLGASLAANSSSS--------------SPYGALGLPSHQQQSSDSCNTSSIPLRH-SHPHKPRFLILDFRRVPAIDMSSVVNCFLPLQTICKDMQVVLCYSNCNVRIEFYLRANRLLEDTNTRLFPTLHQALDSCETALLVQESAHTHGHSVRARAFSLRGVQELSVVRVLRTMLFEEEEEGNEGKEEGMEGESREGTARSIDEAALETIANYAREERYRDQDFIFRKGEPSDSFYLILAGEVALESADDIDVDVLETELLDVHLRGVER-PEIG----DAQQRHVEVVLHSGSLFGFVDFFLENQRRRFFARAMTPVKLGVFSQRALERLEAENPRLMVIVQTLLLKQFSIELGNVSAL 904
            MPMLAKLFILSSVVHQA FSL S+LPYAVGQIQDAGLIFLSKIAT++V LL DKPAEVVVST LVTLGL TA+LG TLM LGHYKLARLVSYLPLPVIGGQIVFIAAFCFRA V LSVGHDLDSLQAW  LYDP +VVLVLPGILAG   S VA SFKHFLALP+AMVCVPLVFYG L+L GE+M+GAR+FGW+G +N PASWQ+S+ LYQVWPP  LG IEWWV+PYQLPTLLGMIFVVSFSSCLDIVAIEMD GRPLNKNHELSTVG SNLIAG+CGGFTGSYIFSQTIFTYRT TRSRLCGLVLI+AEL VF   +DLM+YIPLYFFAATLHFITFELMLEWLVEAR RMT KEY+VLW TF+G+V+ GIIPGFALGIVLSMAMFI+SYAKSTART QAQR RSRV RLR ARRLLD  GKILTLELNGAIFFGSS+TTLEHIKSLLGVA  SP             +R         V +RPSRT+SRR + E      GG+  G                      ++TF +L S     W R+      SV A +  ++   DEE+A E    +    A   A LG+SL  +SS S                YG    P  +  + +   + +    H ++  KPRFLILDFRRVPAIDMSSVVNCFLPLQT+CKD+QV+LCYSNCNVR+EFYLRANRLL D NTRLFPTLHQALDSCETALL +ES HTHGHS+RARAFSLRG+QELSVV VLR +L EEEEE  EG+E G       G A S+DE ALE IA+YAREE +R++D IF K + SDSFYLIL+GEVALES        LE +  +  +R  +R P  G    D ++R VEVVLHSGSLFGFVDFFLENQRRRFFARAMTPVKLGVFSQ AL RLE E+PRLMV+VQ LLLKQFSIELGNVS L
Sbjct:   84 MPMLAKLFILSSVVHQAIFSLFSTLPYAVGQIQDAGLIFLSKIATSVVFLLQDKPAEVVVSTALVTLGLSTAVLGATLMALGHYKLARLVSYLPLPVIGGQIVFIAAFCFRAGVALSVGHDLDSLQAWRALYDPRAVVLVLPGILAGVVLSIVAHSFKHFLALPVAMVCVPLVFYGVLFLAGESMEGARDFGWVGPANAPASWQASVALYQVWPPDLLGRIEWWVVPYQLPTLLGMIFVVSFSSCLDIVAIEMDSGRPLNKNHELSTVGASNLIAGLCGGFTGSYIFSQTIFTYRTQTRSRLCGLVLIMAELAVFFCDVDLMSYIPLYFFAATLHFITFELMLEWLVEARLRMTAKEYVVLWTTFLGNVAFGIIPGFALGIVLSMAMFIISYAKSTARTAQAQRQRSRVARLRGARRLLDH-GKILTLELNGAIFFGSSITTLEHIKSLLGVAQ-SPSRKAK--------ERSTERRKGKMVGYRPSRTHSRRSLTEQAEMWAGGQSIGSADAHTKFAGRRVSSNALTGSRNRTFLNLSS---SLWTRVWHG--GSVDAPKEAQEAAVDEEEATEASPLVGQSSAASLAGLGSSLPPSSSPSHDGRSIGGGASAVTGTYGTGMKPFSEAMTQEMQASGTGAANHFANAPKPRFLILDFRRVPAIDMSSVVNCFLPLQTLCKDVQVILCYSNCNVRVEFYLRANRLLADNNTRLFPTLHQALDSCETALLAEESQHTHGHSLRARAFSLRGMQELSVVSVLRKLLLEEEEEDGEGQEIG------PGMASSVDEDALEMIAHYAREETFREEDSIFYKEDISDSFYLILSGEVALES--------LEEDAREEPMRAADRLPSWGGGSRDRRRRRVEVVLHSGSLFGFVDFFLENQRRRFFARAMTPVKLGVFSQTALRRLEEEHPRLMVLVQKLLLKQFSIELGNVSVL 1003          
The following BLAST results are available for this feature:
BLAST of NO05G00010.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28397.10.000e+068.39sulfate permease family [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G00010NO05G00010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO05G00010.4NO05G00010.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO05G00010.4.cds1NO05G00010.4.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO05G00010.4 ID=NO05G00010.4|Name=NO05G00010.4|organism=Nannochloropsis oceanica|type=mRNA|length=4585bp
taaccctaaccctaaccctaaccctaaccctaaccctaaccctaacccta
accctaaccctaaccctaacctttaatcctcccgagtagggacatatgag
gacaaggaaggaagagggcgagaggggggaagctggggaacagaaccaaa
gacagacagactcacacttacatgcagggcatactttcgtagctgatatc
aagtttgtgacaagccatgcactgctttgaaccgCCCTCGGAGGTCTTCG
GGTATGTATTGGAGAGATAAAGATTGGAGAGAAAAGAGCGAGGAAAGGAG
GGAGGAAGGGAGTGGATCCGAAAAAGCAGCATTCATCAAAAGACAATGCC
CCGCCATTCCTATTAGATCAAGCATAGATGTAGCCGACTCAGTTTAGCCC
CTTCCATTGAGGCACATGCGCGCAGTACTAGCGTGAGTCCCCCCATCTGC
CTCGATTACCTGTTGCCCTCGACTTATCCATGCCCGGCGCACCGGCACGA
GCACATCGTAGCATCACAACTTTACGAGCCTGCAATGATTGCAGTATTTT
CCGGTGAAAAAGCTCCGGAAGCACGCTCGGCTCGCGCCGCGCCGCGGCCA
CTTTACACTAATGCTTTTCTTCCAGCCCTTCCCAGCAACTCCCTCCTCTC
CTTCTCAACAACCTCAGCCCAGGGATCATAAAAAGGCTACACCTACCCGT
TGATGGTTGCTCCTGTCCGCCATATTGCATCAGTTTGTGCGCGCAGCTTC
GAGTCTCCCCTCCTCTGACTGTGCGTTCCGGTGCGTGTTGCTTCAAGAGA
GGGAGGAGGCCAGGAGGTCGAGGGTAAGCAGCTGCAAAAGCAATATAGAA
GAGGTGGAGACCCACAAGCCACGCCGCCCTCCCTTCCCTGTCGTTGATGT
CTACGACTGTTATGGCTCACACACAAATCGACAGACAGGAAGATTCCCCG
TAATGCAGCCACCGCAGTAACTTTAGAAGTAGCACGAAGAGACCAAGGCA
GGGCATATTGGCGTAAATATTATCATGCCTTCACCAAGCAAGCCTGAGTA
CCTCTCTCCGCCTCAACACCACAGAGGAGTCTCACTTGCCAGCTCGTCCT
CGTTTGTGGGGGAAGACCCCATACAAGCCTTGAAGGAGAAGCAGCAGAAA
GAGGAGCGAGAGCCATGGTACCAGCAGCCTCTCAACAGCTTCGTCTACGG
CATGTACGCAGCCCCTTCTTCCACCCGCTCCGCCCCCCTCCCTCTACCTC
TGCGTGCGTGCACTCCTCCCCGCGTTTATATTTGGTGTCAATGCTTGGCT
GATGGTTCCACAAGCGCGTCTATTCTCCCAGTCTTTGAATACTTTCAGTC
TTATTACATCTGCATCCCCATCCATCTGCTCCCCTCCCTACTTCCTTCCC
TTCCCTCCCTCCTGTTTGTTCACTGCCCGGGCCAGCCGATTGCCTGTCCA
TCTCTGGTTCCCTGATCGGAGCGGACTATGATTAGTGGATAAGATTCATC
GAGGCACCTCAGTTTCCTTCTTTTTGGTACGCCTTTCTACTTCTTCTCAA
CATGTGTCTCAGCCAAACCTTTCCATCCCTAATCACCATCCCCTAATCAC
ACATAGTATCAATACGATTGCTTGTGTCCCAGTTCTGTACGGCTACGCGC
AGATCGTCTTTTCGCAGGAACTGTTCCAGCCCTACATGCCCATGCTCGCT
AAGCTTTTCATCCTCTCCTCCGTCGTGCACCAAGCCGCGTTTTCCCTCGT
CTCCTCCCTTCCCTACGCTGTTGGCCAGATCCAAGATGCGGGACTGATTT
TCCTGTCCAAAATTGCCACAAACATCGTCCTCTTGCTGCACGACAAGCCT
GCGGAGGTAGTGGTGTCAACCACTTTGGTGACGCTGGGATTGTGCACGGC
CTTGCTTGGCATCACGCTCATGGGCCTTGGCCACTACAAGCTCGCCCGCC
TCGTTTCCTACTTGCCTTTGCCCGTGATTGGCGGGCAGATTGTCTTCATT
GCCGCTTTTTGCTTCCGTGCGGCTGTCACGCTGTCCGTGGGGCACGATCT
GGATTCTCTTCAGGCCTGGGGACGTTTGTACGACCCGCACTCAGTGGTGT
TGGTGCTGCCTGGCATTCTCGCTGGCGCGGCGTTCTCGGCTGTGGCCCGT
TCCTTCAAGCACTTCCTGGCCCTCCCCCTGGCCATGGTGTGCGTTCCGTT
GGTCTTCTACGGAGGCTTGTACCTGGGCGGGGAGACCATGGATGGGGCGC
GCGAATTCGGCTGGCTGGGAGCCTCCAACGTGCCGGCGTCCTGGCAGTCC
TCTTTGGGGCTCTACCAGGTCTGGCCTCCATCTTCGCTGGGTGGGATTGA
GTGGTGGGTCTTGCCTTATCAGCTTCCTACGCTCCTCGGCATGATATTCG
TGGTCTCTTTTAGTTCCTGTCTGGACATTGTTGCTATCGAGATGGACGGG
GGTCGACCCCTGAACAAAAACCATGAGCTCTCGACAGTCGGCCTCTCCAA
CCTGATCGCCGGCGTCTGTGGGGGATTTACCGGCTCATACATCTTCAGTC
AGACCATATTCACCTACCGCACCAATACCCGCTCCCGGCTGTGTGGTCTG
GTGTTAATTGTGGCGGAGCTGACCGTCTTCCTTTCTCCTATTGACCTCAT
GACCTACATCCCCCTCTACTTTTTCGCTGCCACGCTGCATTTCATCACGT
TTGAGCTCATGCTCGAGTGGTTGGTAGAGGCGCGTTGCCGGATGACGCCC
AAGGAATACTTGGTGTTGTGGGCGACATTTATTGGCAGTGTGAGTCTGGG
CATAATTCCCGGCTTTGCGCTCGGGATTGTGCTGTCTATGGCCATGTTCA
TCGTCTCTTACGCTAAGAGCACGGCCCGCACCGTCCAAGCTCAACGCCAT
CGAAGCCGTGTGGTGCGCCTGCGGGAAGCCCGTCGACTCTTGGACCAGCG
AGGCAAGATCCTGACGCTTGAACTGAACGGAGCCATATTTTTTGGCTCGA
GCGTCACCACCCTCGAGCACATCAAGTCCTTGCTCGGCGTGGCTCCTTTT
TCTCCGCAAGTGACAGGCAACGGGGCATGGGCCATAGCGCCCATGAAAAG
AGGAAAAACAGCAATATCAGCAGCATCAGTCGCACACCGACCCTCGCGCA
CAAACTCACGGCGGGTAATTGAGGAGGGGGGAGGGAAAGTTGATGGCGGC
AGCAAGACATTTCACTCCCTCAAGAGCTTGGTGGGGGAAGCGTGGGGGCG
CTTGCATCGGAGTATCTTCCAAAGCGTACTAGCGAAGGAGCGGCAGGAAG
ATATGGATGAAGACGAGGAGAAAGCAGGAGAGCGGCGCACGGCCATGACG
CTACCTCCGGCCGAAGATGCCGCCCTACTCGGCGCTTCTCTTGCTGCGAA
CAGCAGTAGCAGCAGCCCATATGGAGCTCTCGGACTACCTTCTCACCAGC
AGCAAAGCAGCGATAGTTGCAATACCAGCAGCATCCCATTGCGTCATTCT
CACCCGCATAAGCCCCGTTTTCTCATTTTGGACTTTCGGCGGGTTCCGGC
CATTGATATGTCCAGCGTAGTGAACTGTTTCTTACCTCTTCAGACCATTT
GCAAAGACATGCAGGTTGTTTTGTGTTATAGTAACTGCAATGTCCGTATC
GAATTTTATCTCCGTGCCAACCGTCTGCTTGAAGACACCAATACTCGCCT
TTTCCCCACGCTGCATCAGGCGCTAGACTCATGCGAGACTGCTTTGTTGG
TCCAAGAGTCGGCGCACACGCACGGGCACTCGGTGCGGGCAAGGGCGTTT
TCGTTACGGGGTGTGCAAGAGTTGAGTGTAGTACGTGTGTTGCGAACTAT
GCTGTTTGAAGAAGAAGAGGAGGGAAATGAGGGGAAAGAGGAGGGCATGG
AGGGGGAGTCAAGAGAGGGAACGGCGCGATCCATCGATGAGGCTGCGCTG
GAGACGATTGCGAACTACGCGCGGGAGGAACGGTATCGAGATCAAGATTT
CATCTTCAGGAAAGGGGAACCCTCTGATTCTTTTTACCTAATCTTGGCGG
GGGAAGTAGCGCTGGAGTCGGCCGACGACATCGATGTGGATGTGCTTGAG
ACCGAGCTGTTGGATGTGCACCTGCGCGGGGTAGAACGGCCCGAAATAGG
GGACGCGCAGCAGCGGCACGTGGAGGTGGTTCTTCATTCGGGCTCGCTCT
TCGGCTTTGTGGACTTTTTCCTGGAGAACCAGCGCCGCCGCTTCTTTGCC
AGGGCCATGACCCCCGTCAAGCTGGGTGTTTTCAGTCAGAGGGCTCTTGA
ACGCCTTGAAGCGGAAAATCCGCGGTTGATGGTTATTGTGCAAACTTTGC
TGCTGAAGCAGTTTTCAATCGAGCTTGGAAATGTCTCGGCATTGTAGATG
TAGGGGGGGGGCTGAAGGTAGAGGGAGAAAGGGAGAGCGATAGAAAATTT
TGGATGTGCACACGATTTTGCTCGCCCGTGAAGATGGCATGCAAAGTAAA
TCTAGTAATCGCAAGAAAAGTCAAACAAAGTAGAAAAATAGAGATCAAAG
TGAATCAGCAGCAATAAACGAAGGTGGGTTCTGAA
back to top

protein sequence of NO05G00010.4

>NO05G00010.4-protein ID=NO05G00010.4-protein|Name=NO05G00010.4|organism=Nannochloropsis oceanica|type=polypeptide|length=904bp
MPMLAKLFILSSVVHQAAFSLVSSLPYAVGQIQDAGLIFLSKIATNIVLL
LHDKPAEVVVSTTLVTLGLCTALLGITLMGLGHYKLARLVSYLPLPVIGG
QIVFIAAFCFRAAVTLSVGHDLDSLQAWGRLYDPHSVVLVLPGILAGAAF
SAVARSFKHFLALPLAMVCVPLVFYGGLYLGGETMDGAREFGWLGASNVP
ASWQSSLGLYQVWPPSSLGGIEWWVLPYQLPTLLGMIFVVSFSSCLDIVA
IEMDGGRPLNKNHELSTVGLSNLIAGVCGGFTGSYIFSQTIFTYRTNTRS
RLCGLVLIVAELTVFLSPIDLMTYIPLYFFAATLHFITFELMLEWLVEAR
CRMTPKEYLVLWATFIGSVSLGIIPGFALGIVLSMAMFIVSYAKSTARTV
QAQRHRSRVVRLREARRLLDQRGKILTLELNGAIFFGSSVTTLEHIKSLL
GVAPFSPQVTGNGAWAIAPMKRGKTAISAASVAHRPSRTNSRRVIEEGGG
KVDGGSKTFHSLKSLVGEAWGRLHRSIFQSVLAKERQEDMDEDEEKAGER
RTAMTLPPAEDAALLGASLAANSSSSSPYGALGLPSHQQQSSDSCNTSSI
PLRHSHPHKPRFLILDFRRVPAIDMSSVVNCFLPLQTICKDMQVVLCYSN
CNVRIEFYLRANRLLEDTNTRLFPTLHQALDSCETALLVQESAHTHGHSV
RARAFSLRGVQELSVVRVLRTMLFEEEEEGNEGKEEGMEGESREGTARSI
DEAALETIANYAREERYRDQDFIFRKGEPSDSFYLILAGEVALESADDID
VDVLETELLDVHLRGVERPEIGDAQQRHVEVVLHSGSLFGFVDFFLENQR
RRFFARAMTPVKLGVFSQRALERLEAENPRLMVIVQTLLLKQFSIELGNV
SAL*
back to top

mRNA from alignment at chr5:267..4976+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO05G00010.4 ID=NO05G00010.4|Name=NO05G00010.4|organism=Nannochloropsis oceanica|type=mRNA|length=4710bp|location=Sequence derived from alignment at chr5:267..4976+ (Nannochloropsis oceanica)
taaccctaaccctaaccctaaccctaaccctaaccctaaccctaacccta accctaaccctaaccctaacctttaatcctcccgagtagggacatatgag gacaaggaaggaagagggcgagaggggggaagctggggaacagaaccaaa gacagacagactcacacttacatgcagggcatactttcgtagctgatatc aagtttgtgacaagccatgcactgctttgaaccgCCCTCGGAGGTCTTCG GGTATGTATTGGAGAGATAAAGATTGGAGAGAAAAGAGCGAGGAAAGGAG GGAGGAAGGGAGTGGATCCGAAAAAGCAGCATTCATCAAAAGACAATGCC CCGCCATTCCTATTAGATCAAGCATAGATGTAGCCGACTCAGTTTAGCCC CTTCCATTGAGGCACATGCGCGCAGTACTAGCGTGAGTCCCCCCATCTGC CTCGATTACCTGTTGCCCTCGACTTATCCATGCCCGGCGCACCGGCACGA GCACATCGTAGCATCACAACTTTACGAGCCTGCAATGATTGCAGTATTTT CCGGTGAAAAAGCTCCGGAAGCACGCTCGGCTCGCGCCGCGCCGCGGCCA CTTTACACTAATGCTTTTCTTCCAGCCCTTCCCAGCAACTCCCTCCTCTC CTTCTCAACAACCTCAGCCCAGGGATCATAAAAAGGCTACACCTACCCGT TGATGGTTGCTCCTGTCCGCCATATTGCATCAGTTTGTGCGCGCAGCTTC GAGTCTCCCCTCCTCTGACTGTGCGTTCCGGTGCGTGTTGCTTCAAGAGA GGGAGGAGGCCAGGAGGTCGAGGGTAAGCAGCTGCAAAAGCAATATAGAA GAGGTGGAGACCCACAAGCCACGCCGCCCTCCCTTCCCTGTCGTTGATGT CTACGACTGTTATGGGTAAGAGTCTTGTCAGTAGTCATGTCACTGGTGCC TTCATTACCAAACACGAGTCAAGTTCGAGCTTCATCATCTCTCAAATCGT TTGTTCTGCCATCTCATTCTCAGTCTCACCTCACATTCAGCTCACACACA AATCGACAGACAGGAAGATTCCCCGTAATGCAGCCACCGCAGTAACTTTA GAAGTAGCACGAAGAGACCAAGGCAGGGCATATTGGCGTAAATATTATCA TGCCTTCACCAAGCAAGCCTGAGTACCTCTCTCCGCCTCAACACCACAGA GGAGTCTCACTTGCCAGCTCGTCCTCGTTTGTGGGGGAAGACCCCATACA AGCCTTGAAGGAGAAGCAGCAGAAAGAGGAGCGAGAGCCATGGTACCAGC AGCCTCTCAACAGCTTCGTCTACGGCATGTACGCAGCCCCTTCTTCCACC CGCTCCGCCCCCCTCCCTCTACCTCTGCGTGCGTGCACTCCTCCCCGCGT TTATATTTGGTGTCAATGCTTGGCTGATGGTTCCACAAGCGCGTCTATTC TCCCAGTCTTTGAATACTTTCAGTCTTATTACATCTGCATCCCCATCCAT CTGCTCCCCTCCCTACTTCCTTCCCTTCCCTCCCTCCTGTTTGTTCACTG CCCGGGCCAGCCGATTGCCTGTCCATCTCTGGTTCCCTGATCGGAGCGGA CTATGATTAGTGGATAAGATTCATCGAGGCACCTCAGTTTCCTTCTTTTT GGTACGCCTTTCTACTTCTTCTCAACATGTGTCTCAGCCAAACCTTTCCA TCCCTAATCACCATCCCCTAATCACACATAGTATCAATACGATTGCTTGT GTCCCAGTTCTGTACGGCTACGCGCAGATCGTCTTTTCGCAGGAACTGTT CCAGCCCTACATGCCCATGCTCGCTAAGCTTTTCATCCTCTCCTCCGTCG TGCACCAAGCCGCGTTTTCCCTCGTCTCCTCCCTTCCCTACGCTGTTGGC CAGATCCAAGATGCGGGACTGATTTTCCTGTCCAAAATTGCCACAAACAT CGTCCTCTTGCTGCACGACAAGCCTGCGGAGGTAGTGGTGTCAACCACTT TGGTGACGCTGGGATTGTGCACGGCCTTGCTTGGCATCACGCTCATGGGC CTTGGCCACTACAAGCTCGCCCGCCTCGTTTCCTACTTGCCTTTGCCCGT GATTGGCGGGCAGATTGTCTTCATTGCCGCTTTTTGCTTCCGTGCGGCTG TCACGCTGTCCGTGGGGCACGATCTGGATTCTCTTCAGGCCTGGGGACGT TTGTACGACCCGCACTCAGTGGTGTTGGTGCTGCCTGGCATTCTCGCTGG CGCGGCGTTCTCGGCTGTGGCCCGTTCCTTCAAGCACTTCCTGGCCCTCC CCCTGGCCATGGTGTGCGTTCCGTTGGTCTTCTACGGAGGCTTGTACCTG GGCGGGGAGACCATGGATGGGGCGCGCGAATTCGGCTGGCTGGGAGCCTC CAACGTGCCGGCGTCCTGGCAGTCCTCTTTGGGGCTCTACCAGGTCTGGC CTCCATCTTCGCTGGGTGGGATTGAGTGGTGGGTCTTGCCTTATCAGCTT CCTACGCTCCTCGGCATGATATTCGTGGTCTCTTTTAGTTCCTGTCTGGA CATTGTTGCTATCGAGATGGACGGGGGTCGACCCCTGAACAAAAACCATG AGCTCTCGACAGTCGGCCTCTCCAACCTGATCGCCGGCGTCTGTGGGGGA TTTACCGGCTCATACATCTTCAGTCAGACCATATTCACCTACCGCACCAA TACCCGCTCCCGGCTGTGTGGTCTGGTGTTAATTGTGGCGGAGCTGACCG TCTTCCTTTCTCCTATTGACCTCATGACCTACATCCCCCTCTACTTTTTC GCTGCCACGCTGCATTTCATCACGTTTGAGCTCATGCTCGAGTGGTTGGT AGAGGCGCGTTGCCGGATGACGCCCAAGGAATACTTGGTGTTGTGGGCGA CATTTATTGGCAGTGTGAGTCTGGGCATAATTCCCGGCTTTGCGCTCGGG ATTGTGCTGTCTATGGCCATGTTCATCGTCTCTTACGCTAAGAGCACGGC CCGCACCGTCCAAGCTCAACGCCATCGAAGCCGTGTGGTGCGCCTGCGGG AAGCCCGTCGACTCTTGGACCAGCGAGGCAAGATCCTGACGCTTGAACTG AACGGAGCCATATTTTTTGGCTCGAGCGTCACCACCCTCGAGCACATCAA GTCCTTGCTCGGCGTGGCTCCTTTTTCTCCGCAAGTGACAGGCAACGGGG CATGGGCCATAGCGCCCATGAAAAGAGGAAAAACAGCAATATCAGCAGCA TCAGTCGCACACCGACCCTCGCGCACAAACTCACGGCGGGTAATTGAGGA GGGGGGAGGGAAAGTTGATGGCGGCAGCAAGACATTTCACTCCCTCAAGA GCTTGGTGGGGGAAGCGTGGGGGCGCTTGCATCGGAGTATCTTCCAAAGC GTACTAGCGAAGGAGCGGCAGGAAGATATGGATGAAGACGAGGAGAAAGC AGGAGAGCGGCGCACGGCCATGACGCTACCTCCGGCCGAAGATGCCGCCC TACTCGGCGCTTCTCTTGCTGCGAACAGCAGTAGCAGCAGCCCATATGGA GCTCTCGGACTACCTTCTCACCAGCAGCAAAGCAGCGATAGTTGCAATAC CAGCAGCATCCCATTGCGTCATTCTCACCCGCATAAGCCCCGTTTTCTCA TTTTGGACTTTCGGCGGGTTCCGGCCATTGATATGTCCAGCGTAGTGAAC TGTTTCTTACCTCTTCAGACCATTTGCAAAGACATGCAGGTTGTTTTGTG TTATAGTAACTGCAATGTCCGTATCGAATTTTATCTCCGTGCCAACCGTC TGCTTGAAGACACCAATACTCGCCTTTTCCCCACGCTGCATCAGGCGCTA GACTCATGCGAGACTGCTTTGTTGGTCCAAGAGTCGGCGCACACGCACGG GCACTCGGTGCGGGCAAGGGCGTTTTCGTTACGGGGTGTGCAAGAGTTGA GTGTAGTACGTGTGTTGCGAACTATGCTGTTTGAAGAAGAAGAGGAGGGA AATGAGGGGAAAGAGGAGGGCATGGAGGGGGAGTCAAGAGAGGGAACGGC GCGATCCATCGATGAGGCTGCGCTGGAGACGATTGCGAACTACGCGCGGG AGGAACGGTATCGAGATCAAGATTTCATCTTCAGGAAAGGGGAACCCTCT GATTCTTTTTACCTAATCTTGGCGGGGGAAGTAGCGCTGGAGTCGGCCGA CGACATCGATGTGGATGTGCTTGAGACCGAGCTGTTGGATGTGCACCTGC GCGGGGTAGAACGGCCCGAAATAGGGGACGCGCAGCAGCGGCACGTGGAG GTGGTTCTTCATTCGGGCTCGCTCTTCGGCTTTGTGGACTTTTTCCTGGA GAACCAGCGCCGCCGCTTCTTTGCCAGGGCCATGACCCCCGTCAAGCTGG GTGTTTTCAGTCAGAGGGCTCTTGAACGCCTTGAAGCGGAAAATCCGCGG TTGATGGTTATTGTGCAAACTTTGCTGCTGAAGCAGTTTTCAATCGAGCT TGGAAATGTCTCGGCATTGTAGATGTAGGGGGGGGGCTGAAGGTAGAGGG AGAAAGGGAGAGCGATAGAAAATTTTGGATGTGCACACGATTTTGCTCGC CCGTGAAGATGGCATGCAAAGTAAATCTAGTAATCGCAAGAAAAGTCAAA CAAAGTAGAAAAATAGAGATCAAAGTGAATCAGCAGCAATAAACGAAGGT GGGTTCTGAA
back to top

Coding sequence (CDS) from alignment at chr5:267..4976+

>NO05G00010.4 ID=NO05G00010.4|Name=NO05G00010.4|organism=Nannochloropsis oceanica|type=CDS|length=2712bp|location=Sequence derived from alignment at chr5:267..4976+ (Nannochloropsis oceanica)
ATGCCCATGCTCGCTAAGCTTTTCATCCTCTCCTCCGTCGTGCACCAAGC
CGCGTTTTCCCTCGTCTCCTCCCTTCCCTACGCTGTTGGCCAGATCCAAG
ATGCGGGACTGATTTTCCTGTCCAAAATTGCCACAAACATCGTCCTCTTG
CTGCACGACAAGCCTGCGGAGGTAGTGGTGTCAACCACTTTGGTGACGCT
GGGATTGTGCACGGCCTTGCTTGGCATCACGCTCATGGGCCTTGGCCACT
ACAAGCTCGCCCGCCTCGTTTCCTACTTGCCTTTGCCCGTGATTGGCGGG
CAGATTGTCTTCATTGCCGCTTTTTGCTTCCGTGCGGCTGTCACGCTGTC
CGTGGGGCACGATCTGGATTCTCTTCAGGCCTGGGGACGTTTGTACGACC
CGCACTCAGTGGTGTTGGTGCTGCCTGGCATTCTCGCTGGCGCGGCGTTC
TCGGCTGTGGCCCGTTCCTTCAAGCACTTCCTGGCCCTCCCCCTGGCCAT
GGTGTGCGTTCCGTTGGTCTTCTACGGAGGCTTGTACCTGGGCGGGGAGA
CCATGGATGGGGCGCGCGAATTCGGCTGGCTGGGAGCCTCCAACGTGCCG
GCGTCCTGGCAGTCCTCTTTGGGGCTCTACCAGGTCTGGCCTCCATCTTC
GCTGGGTGGGATTGAGTGGTGGGTCTTGCCTTATCAGCTTCCTACGCTCC
TCGGCATGATATTCGTGGTCTCTTTTAGTTCCTGTCTGGACATTGTTGCT
ATCGAGATGGACGGGGGTCGACCCCTGAACAAAAACCATGAGCTCTCGAC
AGTCGGCCTCTCCAACCTGATCGCCGGCGTCTGTGGGGGATTTACCGGCT
CATACATCTTCAGTCAGACCATATTCACCTACCGCACCAATACCCGCTCC
CGGCTGTGTGGTCTGGTGTTAATTGTGGCGGAGCTGACCGTCTTCCTTTC
TCCTATTGACCTCATGACCTACATCCCCCTCTACTTTTTCGCTGCCACGC
TGCATTTCATCACGTTTGAGCTCATGCTCGAGTGGTTGGTAGAGGCGCGT
TGCCGGATGACGCCCAAGGAATACTTGGTGTTGTGGGCGACATTTATTGG
CAGTGTGAGTCTGGGCATAATTCCCGGCTTTGCGCTCGGGATTGTGCTGT
CTATGGCCATGTTCATCGTCTCTTACGCTAAGAGCACGGCCCGCACCGTC
CAAGCTCAACGCCATCGAAGCCGTGTGGTGCGCCTGCGGGAAGCCCGTCG
ACTCTTGGACCAGCGAGGCAAGATCCTGACGCTTGAACTGAACGGAGCCA
TATTTTTTGGCTCGAGCGTCACCACCCTCGAGCACATCAAGTCCTTGCTC
GGCGTGGCTCCTTTTTCTCCGCAAGTGACAGGCAACGGGGCATGGGCCAT
AGCGCCCATGAAAAGAGGAAAAACAGCAATATCAGCAGCATCAGTCGCAC
ACCGACCCTCGCGCACAAACTCACGGCGGGTAATTGAGGAGGGGGGAGGG
AAAGTTGATGGCGGCAGCAAGACATTTCACTCCCTCAAGAGCTTGGTGGG
GGAAGCGTGGGGGCGCTTGCATCGGAGTATCTTCCAAAGCGTACTAGCGA
AGGAGCGGCAGGAAGATATGGATGAAGACGAGGAGAAAGCAGGAGAGCGG
CGCACGGCCATGACGCTACCTCCGGCCGAAGATGCCGCCCTACTCGGCGC
TTCTCTTGCTGCGAACAGCAGTAGCAGCAGCCCATATGGAGCTCTCGGAC
TACCTTCTCACCAGCAGCAAAGCAGCGATAGTTGCAATACCAGCAGCATC
CCATTGCGTCATTCTCACCCGCATAAGCCCCGTTTTCTCATTTTGGACTT
TCGGCGGGTTCCGGCCATTGATATGTCCAGCGTAGTGAACTGTTTCTTAC
CTCTTCAGACCATTTGCAAAGACATGCAGGTTGTTTTGTGTTATAGTAAC
TGCAATGTCCGTATCGAATTTTATCTCCGTGCCAACCGTCTGCTTGAAGA
CACCAATACTCGCCTTTTCCCCACGCTGCATCAGGCGCTAGACTCATGCG
AGACTGCTTTGTTGGTCCAAGAGTCGGCGCACACGCACGGGCACTCGGTG
CGGGCAAGGGCGTTTTCGTTACGGGGTGTGCAAGAGTTGAGTGTAGTACG
TGTGTTGCGAACTATGCTGTTTGAAGAAGAAGAGGAGGGAAATGAGGGGA
AAGAGGAGGGCATGGAGGGGGAGTCAAGAGAGGGAACGGCGCGATCCATC
GATGAGGCTGCGCTGGAGACGATTGCGAACTACGCGCGGGAGGAACGGTA
TCGAGATCAAGATTTCATCTTCAGGAAAGGGGAACCCTCTGATTCTTTTT
ACCTAATCTTGGCGGGGGAAGTAGCGCTGGAGTCGGCCGACGACATCGAT
GTGGATGTGCTTGAGACCGAGCTGTTGGATGTGCACCTGCGCGGGGTAGA
ACGGCCCGAAATAGGGGACGCGCAGCAGCGGCACGTGGAGGTGGTTCTTC
ATTCGGGCTCGCTCTTCGGCTTTGTGGACTTTTTCCTGGAGAACCAGCGC
CGCCGCTTCTTTGCCAGGGCCATGACCCCCGTCAAGCTGGGTGTTTTCAG
TCAGAGGGCTCTTGAACGCCTTGAAGCGGAAAATCCGCGGTTGATGGTTA
TTGTGCAAACTTTGCTGCTGAAGCAGTTTTCAATCGAGCTTGGAAATGTC
TCGGCATTGTAG
back to top
Synonyms
Publications