NO30G01090.1, NO30G01090.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G01090.1
Unique Name	NO30G01090.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3508
Alignment location	chr30:400628..406950 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:400628..406950 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G01090.1 vs.
Match: EWM20695.1 (protein disulfide-isomerase a3 [Nannochloropsis gaditana])

HSP 1 Score: 306.6 bits (784), Expect = 2.000e-79
Identity = 166/242 (68.60%), Postives = 190/242 (78.51%), Query Frame = 0

Query:  463 KPGGASPVKKFVGSNFLRRVAEDGKDVLVLVTRPFCQSCMDLALAFELLGKALQAEPRVVLGKIDAQLNDLPPTVLPPP-SPRPPPPPLVPGQEQAM-EGGRGGGREGGRGVPIFVALSQPSPALQDLAEFLTTEGSFGTGLKMATLEQMGALAIDEEVIRARLEAEERSLLRNQIRQHYDLPLLDKLAGEVVFDGHRWQVWLGGLSLVMNAFFVLSWYLSSVAEAAKRKKKAKGRDGMKTE 703
            KPGG SPV+KFVG NFL+RVAE+GKDVLVLVTRP C SC+DLAL+FELLGKALQA+ RVVLGKIDA LNDLPP+VL P  SP  P   L P + +   EGG  GGREGG G+P FV L  PSPAL DLAEFL+ EGSFG+ LK+ATLEQMGALAIDEEV+RARLEA+ER +LRN +R+ Y  PLLDK+AGEVVFDGHRW  WLGGLSL++N  F LSWY  S   AAK+K+  K   G K +
Sbjct:    5 KPGGVSPVRKFVGKNFLKRVAEEGKDVLVLVTRPLCPSCLDLALSFELLGKALQADTRVVLGKIDALLNDLPPSVLSPSLSPALPLLLLFPAKNKPWDEGGGEGGREGG-GLPAFVTLPDPSPALHDLAEFLSREGSFGSELKIATLEQMGALAIDEEVVRARLEAQERRVLRNHLRRRYSHPLLDKIAGEVVFDGHRWHTWLGGLSLLINLAFFLSWYAVSSTAAAKKKRGKKLAHGQKAD 245

The following BLAST results are available for this feature:

BLAST of NO30G01090.1 vs.

BLAST of NO30G01090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20695.1	2.000e-79	68.60	protein disulfide-isomerase a3 [Nannochloropsis ga...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G01090	NO30G01090	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G01090.1	NO30G01090.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G01090.1.cds1	NO30G01090.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds2	NO30G01090.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds3	NO30G01090.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds4	NO30G01090.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds5	NO30G01090.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds6	NO30G01090.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds7	NO30G01090.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds8	NO30G01090.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds9	NO30G01090.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds10	NO30G01090.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds11	NO30G01090.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds12	NO30G01090.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds13	NO30G01090.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds14	NO30G01090.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G01090.1.cds15	NO30G01090.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:400628..406950-
coding sequence from alignment at chr30:400628..406950-

mRNA sequence

>NO30G01090.1 ID=NO30G01090.1|Name=NO30G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=3508bp
AAAGAATAAAGTGCATCCTCAAAATCTTCTAATTTGTTTCATGGGCATGA
TTTCGCGTATGGTCACGATCTCTCTCCCGATATTTGTCGTACATACCACT
CCCTCCCTCTCTCCCTCCATCCCTCCCTCCCTCCGTCAGAGTCGCCTTGT
CTGTGTCATTGTCGGTATCTATATATCTGGTGACATTATCCTGGGACTCT
TCCACCTCTATCATCCAAAATCAGGGTTGAATAGATGGAAGGGAGGGAAG
GAGGGAGGGAGGAGGGGAGGGAAAGGGACACTTACCCTGATTATTTCTTC
GTCGGTTTCCTCGTCGATTTCCGGCGTGGTCACTGTCTCCTCCACGTCTC
CCAGTATCATATTAAGATGTCTGTCAAACGCCTGTGGGGAAGGAGAAAAG
AGAGGGGGGGGAGGAGGAAGAGAGGGATGGATGCAAGGAGAAAGAGCGGT
GAGCACGAGGGCCCTGTGGTAAGCGGAAAAAAAAGAGGCGAGGTCCCCTG
TTGCCCTACTCACTACACCTTCTACACTCCCTCCACACAGGGACATGGAT
CTCTTCATCGCCCTTCATATTCAACCCTACATCCATCTCTCCCTCCTTTC
TTCCCTCCCTCCCACTTACATGCAGCTTTCCTCGCAGCTCCCTCTCCCCG
CGGCACTTGACATAAACCCTTTCATCTAGGGACAGACGGATCAGGTCCAA
AGGCTCATCGACCGAAGAGGACATGGCTGTACCGAGAGAGGCAGGGGGGG
GAGGAAGGGAGGGAGGGGGAGAGAGAGAGAGGGAGGGGTGCTTAAGTGGT
GTATGATGGTGGCGAGGATTATTAGAAAGCCCTAACCCTAACCGGCGGGT
TAGATCAGATCACAGCTATGTGAAAAACGGGGGGAAGTGGTGAGGGGGAG
AGTGGTGAAAGCGACATTAGCTACAGGCAAGAGGTTCATTCATGTGCGTG
AGGTCTCTCGCTGTGAAGTACAGGGAAGGCAAAAAGGAATTATTGCAGTG
TAACGGGAGGTCGGGAGACGATGAAGCAAGAAAAGCCACCCCTCTAAACT
TTCCATCCTACACCCACAATCACAAGCCACACACAGACACGCTTTCTGTG
AGAGAGTGTTGCCATCTTTTTCGTGACCCCGTGAAAAGTATTGATTGTAC
TTCAGCCGCGATCCTACCTGCCTCCACGCTCTGCCCTCCTGCTCTTCTAC
AGCCAGCACACAATAATGAACCTACCACGGCCCGACGCAGGTCCCGGCCA
TCCTAAACGTTGTCGTCTGCCCTTTTCCTTCCATTCCCTGCTCTATTTAG
GCATAGTGCTGCTATTAGTCTCACTAGACCCTGTCCATTCTGGGGTAATC
CGTCTCGATGCCGGGAACTTTGAGCTGGCCGTGCAGACCTACTCGACGCT
TGCAATCCTTTTCCATGAGGAGCAGGGAGGAAGTGGCTTAGTGGAAAGAT
GGGAGCAGGCGGCACGCTTGGCCCACGAGAGAATAAGCGCCCAAGGCGAC
GAAATGGATTTTGCGGTCATCGAGGCCGACAGCCCAGAGGTGGCCGACCT
CGTCGCGTCCTACGGCTTTTCCCTGCCAAGCGTGCAAATTTTTCGACGAC
GGGTGATGCACCATTGGGAGGGGAATGGAGAGCTGAGAGAAGCTACGATA
AATGATTTAAGCAATGCTCTGGTGGCGGAGGCGGCGCCGGCCGTGCGCTT
GGCCTCCTCCATGGAAGAATTCGACAGGCTCCAGTATTCGACCAACATTC
TCGTAGTGGGCCTTTTCGAGGACGAGGACGAGGAAGGGAGGGAGGAAGGG
GGGGATGGCGCCTCGCTTACCCCCTATGCCGCTTTTGAGGGGGCCGCCGA
TCAACTTAGAGGTTACGCCACATTTGTTCGCGCCCTGCCTGGGGGGGAGG
GGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGGACTGGAGGG
AGCAAAGACATGCCGATGGAGGGCGAGGGCGAGGTCGAGGGCGAGGAGGA
GGAGCAGGGGCGGGAAGAGAAGGAAGAAGTCCACCTCCTCCTCTACCCTG
GGCCGCTCCTGGAAGCTCCCCTCTCCGACTGGATCCTCTCCCACGACGTG
CCGCTCTTCGGCCGTCTCGGCGGTCCCTCCCTCCCTCCCTCCTTCCCTCC
CTCCTCCCTCCTTTCCGAGGAGGAGGGAGGGCTGTTGAGGGGAGGGCTGG
GGGGGGGAGAGGCGTACGTCCAAAAATTCTTCAACAGTGCGTTGGTCAAG
TACGTGGCTTTCGTCCGGAGAGACCAGGCGAATGCACGACAGCTCCAGGG
CCTGGCCACTGTAGCGGATCGGTACCGGGGCCAAGCGCTCTTTGCCTTCG
TGGTGGAAGGGGACTTTGAAAATGCCTGGGAGTACTTCGAGGTGGATCCC
TCCCTCTGTCCCGCCCTCGTTTTTTTCGACCCCCAAACGAATCACCGCCT
CCTCTCCCCCTCCCTCGCCCCTCTCGAGCAAGGAGAGGTGGCCATCTTCG
TGTCATCCACGATGCGGGGCCTCCCCCCTCCCCTCCCGAAGAGCGAGAGG
GAGGAGGTTGAGGACGAGAGGAAGAAGAGGCTCGCACCCATCAGCGCCCA
GAAACCGGGAGGAGCTTCCCCTGTCAAGAAATTCGTAGGAAGCAATTTTC
TCCGTCGTGTGGCCGAGGACGGGAAAGACGTGCTGGTGCTGGTGACACGC
CCCTTCTGTCAGTCCTGCATGGACCTCGCGCTGGCCTTTGAGCTTCTCGG
AAAAGCTCTTCAGGCCGAGCCCCGCGTCGTCTTGGGGAAAATCGATGCCC
AACTCAACGATCTGCCCCCTACCGTCCTCCCCCCGCCCTCCCCCCGCCCT
CCCCCTCCTCCTCTTGTTCCCGGCCAAGAACAAGCCATGGAAGGAGGGAG
GGGGGGAGGGCGGGAGGGAGGGAGGGGGGTTCCGATCTTTGTAGCCTTGT
CGCAACCGTCGCCCGCCCTTCAGGATTTGGCTGAATTTTTGACGACGGAG
GGTTCGTTTGGGACAGGGTTAAAGATGGCCACGTTGGAGCAAATGGGCGC
GTTGGCCATCGACGAGGAAGTCATCCGCGCACGTTTGGAGGCCGAAGAGC
GCTCCCTGTTGCGGAACCAAATCAGACAACATTACGACCTCCCTTTATTG
GATAAGCTTGCCGGTGAGGTCGTGTTTGACGGTCATCGATGGCAGGTATG
GCTGGGAGGTTTATCGCTGGTAATGAATGCTTTTTTTGTGTTGTCATGGT
ACCTGTCGTCGGTGGCGGAGGCGGCGAAGCGAAAGAAGAAGGCGAAAGGG
AGGGACGGGATGAAAACGGAGTAGAGCTCAAGGGAGGGTAGGAAGGAGAC
GAGACTGCTGGAAAATTGCGTCGATTTATGACAGAAAGGGGCTCTATTTG
ATAAGCGCCACACGGTAATTAACATTAGGGCTATCGCAAGGTAATACAGC
CTTTAACCTTGCCGCGTAATATATGATTAAAAAACAATCAATAGTACAGG
AAGAAGAC

protein sequence of NO30G01090.1

>NO30G01090.1-protein ID=NO30G01090.1-protein|Name=NO30G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=703bp
MNLPRPDAGPGHPKRCRLPFSFHSLLYLGIVLLLVSLDPVHSGVIRLDAG
NFELAVQTYSTLAILFHEEQGGSGLVERWEQAARLAHERISAQGDEMDFA
VIEADSPEVADLVASYGFSLPSVQIFRRRVMHHWEGNGELREATINDLSN
ALVAEAAPAVRLASSMEEFDRLQYSTNILVVGLFEDEDEEGREEGGDGAS
LTPYAAFEGAADQLRGYATFVRALPGGEGGGREGGREGGRAGTGGSKDMP
MEGEGEVEGEEEEQGREEKEEVHLLLYPGPLLEAPLSDWILSHDVPLFGR
LGGPSLPPSFPPSSLLSEEEGGLLRGGLGGGEAYVQKFFNSALVKYVAFV
RRDQANARQLQGLATVADRYRGQALFAFVVEGDFENAWEYFEVDPSLCPA
LVFFDPQTNHRLLSPSLAPLEQGEVAIFVSSTMRGLPPPLPKSEREEVED
ERKKRLAPISAQKPGGASPVKKFVGSNFLRRVAEDGKDVLVLVTRPFCQS
CMDLALAFELLGKALQAEPRVVLGKIDAQLNDLPPTVLPPPSPRPPPPPL
VPGQEQAMEGGRGGGREGGRGVPIFVALSQPSPALQDLAEFLTTEGSFGT
GLKMATLEQMGALAIDEEVIRARLEAEERSLLRNQIRQHYDLPLLDKLAG
EVVFDGHRWQVWLGGLSLVMNAFFVLSWYLSSVAEAAKRKKKAKGRDGMK
TE*

mRNA from alignment at chr30:400628..406950-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G01090.1 ID=NO30G01090.1|Name=NO30G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=6323bp|location=Sequence derived from alignment at chr30:400628..406950- (Nannochloropsis oceanica)
AAAGAATAAAGTGCATCCTCAAAATCTTCTAATTTGTTTCATGGGCATGA
TTTCGCGTATGGTCACGATCTCTCTCCCGATATTTGTCGTACATACCACT
CCCTCCCTCTCTCCCTCCATCCCTCCCTCCCTCCGTCAGAGTCGCCTTGT
CTGTGTCATTGTCGGTATCTATATATCTGGTGACATTATCCTGGGACTCT
TCCACCTCTATCATCCAAAATCAGGGTTGAATAGATGGAAGGGAGGGAAG
GAGGGAGGGAGGAGGGGAGGGAAAGGGACACTTACCCTGATTATTTCTTC
GTCGGTTTCCTCGTCGATTTCCGGCGTGGTCACTGTCTCCTCCACGTCTC
CCAGTATCATATTAAGATGTCTGTCAAACGCCTGTGGGGAAGGAGAAAAG
AGAGGGGGGGGAGGAGGAAGAGAGGGATGGATGCAAGGAGAAAGAGCGGT
GAGCACGAGGGCCCTGTGGTAAGCGGAAAAAAAAGAGGCGAGGTCCCCTG
TTGCCCTACTCACTACACCTTCTACACTCCCTCCACACAGGGACATGGAT
CTCTTCATCGCCCTTCATATTCAACCCTACATCCATCTCTCCCTCCTTTC
TTCCCTCCCTCCCACTTACATGCAGCTTTCCTCGCAGCTCCCTCTCCCCG
CGGCACTTGACATAAACCCTTTCATCTAGGGACAGACGGATCAGGTCCAA
AGGCTCATCGACCGAAGAGGACATGGCTGTACCGAGAGAGGCAGGGGGGG
GAGGAAGGGAGGGAGGGGGAGAGAGAGAGAGGGAGGGGTGCTTAAGTGGT
GTATGATGGTGGCGAGGATTATTAGAAAGCCCTAACCCTAACCGGCGGGT
TAGATCAGATCACAGCTATGTGAAAAACGGGGGGAAGTGGTGAGGGGGAG
AGTGGTGAAAGCGACATTAGCTACAGGCAAGAGGTTCATTCATGTGCGTG
AGGTCTCTCGCTGTGAAGTACAGGGAAGGCAAAAAGGAATTATTGCAGTG
TAACGGGAGGTCGGGAGACGATGAAGCAAGAAAAGCCACCCCTCTAAACT
TTCCATCCTACACCCACAATCACAAGCCACACACAGACACGCTTTCTGTG
AGAGAGTGTTGCCATCTTTTTCGTGACCCCGTGAAAAGTATTGATTGTAC
TTCAGCCGCGATCCTACCTGCCTCCACGCTCTGCCCTCCTGCTCTTCTAC
AGCCAGCACACAATAATGAACCTACCACGGCCCGACGCAGGTCCCGGCCA
TCCTAAACGTTGTCGTCTGCCCTTTTCCTTCCATTCCCTGCTCTATTTAG
GCATAGTGCTGCTATTAGTCTCACTAGGTACGTCCATCTTTTCAACCCTG
CTTGAAGAGGAAGGGAAGAGAGGCAAAGGGGTGGGGGAGGTCAGCCTCCC
CGCTCGTCCCGCGGCTACACACTCTCTCGCGTGAGGTTACCCTACGATTT
GTCGCCACACACGCGATGACATTTTTTGAACCCCAGGAATACCCAACGCC
CCCCCATGCTACTTCTCACCATCCCACCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCGGGTCGCAGACCCTGTCCATTCTGGGGTAATCCG
TCTCGATGCCGGGAACTTTGAGCTGGCCGTGCAGACCTACTCGACGCTTG
CAATCCTTTTCCATGAGGAGCAGGGAGGAAGTGGCTTAGTGGAAAGATGG
GAGCAGGTACGAAGAAGGGGAGGAGGGAGGGAGGGAAGGAGGATGGGATG
TTATCCCTCGTCCTTGGCAGTGTTTTTCCTTCTTCTTTTTCCTGTCCTTT
AGTCCCTTCCCTCTTCCTCGCCATGACCACGCACTGTCGCTTACCGACAG
GCGGCACGCTTGGCCCACGAGAGAATAAGCGCCCAAGGCGACGAAATGGA
TTTTGCGGTCATCGAGGCCGACAGCCCAGGTACCCCTCCCTCCCTCCCGC
CCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTCCTTCCA
TCTGACTGATCTTGTTGCATCTCACGGATTCTCTTTCTCCCTCCCGCCCT
CCCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCGTCCCTCCCCCCCCTA
GAGGTGGCCGACCTCGTCGCGTCCTACGGCTTTTCCCTGCCAAGCGTGCA
AATTTTTCGACGACGGGTGATGCACCATTGGGAGGGGAATGGAGAGCTGA
GAGAAGCTACGGTGAGAGGGGGGGAGGAGGGAGGGAGGGAGGGAGGGATT
AAGAACGACTTGATTTTTGAGGAAGAGGAGTACGTTTTACTCATCTTCCT
CTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTATCTCTCCCCGACTCTCT
CTTTCTCTCTGTCCACACATACACATAAATGTAAATAAATATATCTACAG
ATAAATGATTTAAGCAATGCTCTGGTGGCGGAGGCGGCGCCGGCCGTGCG
CTTGGCCTCCTCCATGGAAGAATTCGACAGGGTACCTCCCTCCCTCCCTC
CCTTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACGCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCCTCCCTCCCTTCCGCTTGCCATCTTTTTCA
GTACTGCATTTGGTGACCCTCCCGCCCTCCCTCCTTCCCTCCCTCCTCAG
CTCCAGTATTCGACCAACATTCTCGTAGTGGGCCTTTTCGAGGACGAGGA
CGAGGAAGGGAGGGAGGAAGGGGGGGATGGCGCCTCGCTTACCCCCTATG
CCGCTTTTGAGGTAGAGGGAGGGAGGGAGGGAGGGCGGGAAGGAGGGAGG
GCGGGAAGGAGGGAGGGCGGGAGGGTGGGAGAGAGGGAGGTCAGGCGAGA
GTAAACCGATGTCTAGTGAAGGATGATTGCTCCTTCGTGGGATCCTCAAC
CTCCCCTCCCCTCCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCAGGGGGCCGCCGATCAACTTAGAGGTTACGCCACATTTGTTCGCG
CCCTGCCTGGGGGGGAGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGCGGGGACTGGAGGGAGCAAGTGGGGGGGGGCTTGCTTTGGGGGAAG
GAGGGAGCAGACGACGGAGGGAGGGAGGGAAGTAGGGAGGGAGGGAGGGC
TCCGCGGGTGCTCTATATGGATTTCAGAGACATGCCGATGGAGGGCGAGG
GCGAGGTCGAGGGCGAGGAGGAGGAGCAGGGGCGGGAAGAGAAGGAAGAA
GGTATTTTGATGTCTTTCCTCCCTCTTTCCCTCCCTTCCCTTTTTTCTTT
CCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCCATCATGTCCTCCTCCTC
CGTCCCGTCATTCCAACACCTCTGTTCCCCCCACTCATTCCTCAACTATT
TCCTTCACGGGGCTCCCCTCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTAGTCCACCTCCTCCTCTACCCTGGGCCGCTCCTGGAAGCTCCCCTCTC
CGACTGGATCCTCTCCCACGACGTGCCGCTCTTCGGCCGTCTCGGCGGTC
CCTCCCTCCCTCCCTCCTTCCCTCCCTCCTCCCTCCTTTCCGAGGAGGAG
GGAGGGCTGTTGAGGGGAGGGCTGGGGGGGGGAGAGGCGTACGTCCAAAA
ATTCTTCAACAGTGCGTTGGTCAAGTACGTGGCTTTCGTCCGGAGAGACC
AGGCGAATGCACGACAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGGCCAGGAAAGATGGATGATGTGCTGGGAAGGACGTGGGAGATAAG
ATGATGTGAACGTTGTCAAAATGACGGGCTTTAGAAAGCGGAGACGATGA
AAGAGGGAAGGAAGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG
GAGGGAGGGAGGGAGGGAGAGGGAGGGAGGGAGGGAGAGGGAGGGAGGGA
GAGAGGGGGATCGGTTCAAAGTGTCTTTATTTCCATTGCGTTGGTGAGAG
GGAGGGACTGTGCGGCAGGTATTTGGCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCTCCTCACTGCCCTTTTTCATCGTCTCGTCCATGTCACCTTA
CCTTCCACGTCCTTCCCATTACACCATCTTTCGTGGGGCCCCCCTCCCTC
CCCCCTCCCTCCCTCCCTCCCTCAGCTCCAGGGCCTGGCCACTGTAGCGG
ATCGGTACCGGGGCCAAGCGCTCTTTGCCTTCGTGGTGGAAGGGGACTTT
GAAAATGCCTGGGAGTACTTCGAGGTAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGGAAGGTCTATGTTTGGGATGGAGGGGAAAGGGTG
CACATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCAT
TCCTCCCTCTTTTCTCATTTTTTCCCTCTACAAAACAAACAACCAATCGA
CCATCAATTTCCCTTCATTCACACACACACATAAATATATACATATGTGT
GCATACATATATATACAGGTGGATCCCTCCCTCTGTCCCGCCCTCGTTTT
TTTCGACCCCCAAACGAATCACCGCCTCCTCTCCCCCTCCCTCGCCCCTC
TCGAGCAAGGAGAGGTGGCCATCTTCGTGTCATCCACGATGCGGGGCCTC
CCCCCTCCCCTCCCGAAGAGCGAGAGGGAGGAGGTTGAGGACGAGAGGAA
GAAGAGGCTCGCACCCATCAGCGCCCAGGTGCTTTCATGCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTCCATCCCGAGCTT
GTCGGGCTTGCTAGCCCGTCATGCTGACACCCTCCCTCTCTCCCTCCCTC
TCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGAAACCGGGAGGA
GCTTCCCCTGTCAAGAAATTCGTAGGAAGCAATTTTCTCCGTCGTGTGGC
CGAGGACGGGAAAGACGTGCTGGTGCTGGTGACACGGTAAGTCCCTCCCT
CCCTCCTTCTCTCCCTCTTCTCGTGTTCAGCCCGTCGAGCCCGTCCAAAT
ACGACGCATATGTCCCTCTCTCTCTCCTTTCCTCCCTCCCCCCCCCTCCC
TCCCTCCCTCCTTCACCCTCCCACTCTCCCTCCCTCCCTCTCTCCCTTCC
TCCCTTCTTCAGCCCCTTCTGTCAGTCCTGCATGGACCTCGCGCTGGCCT
TTGAGCTTCTCGGAAAAGCTCTTCAGGCCGAGCCCCGCGTCGTCTTGGGG
AAAATCGATGCCCAACTCAACGATCTGCCCCCTACCGTCCTCCCCCCGCC
CTCCCCCCGCCCTCCCCCTCCTCCTCTTGTTCCCGGCCAAGAACAAGCCA
TGGAAGGAGGGAGGGGGGGAGGGCGGGAGGGAGGGAGGGGGGTTCCGATC
TTTGTAGCCTTGTCGCAACCGTCGCCCGCCCTTCAGGATTTGGCTGAATT
TTTGACGACGGAGGGTTCGTTTGGGACAGGGTTAAAGGTGAGGGGGAGGG
AGGGAAGGGAAAGAGGGAAGGGAGAGAGGGAGGGAGGAAGGGAGAGAGGG
AGGGAGGGAGGGCCAAGGAAGTGATATTCATCATTTATTTATTTTCCTTG
TCTATCCACATAATTAAAACTATCGTTTATTTGAACTTCAACGTCTGTAC
ACAGATGGCCACGTTGGAGCAAATGGGCGCGTTGGCCATCGACGAGGAAG
TCATCCGGTACGTTCCACCTCTCCACTCTTCATCCCTCCCTCCCTTCCTC
CCTTCCTCCCTCCCTCTCTCCCTTCCCTCTTTCCCCTCCCTCCCTTCCTT
CCCTTCCCTCTTTCCCTTCCCTCCCTCCCTTGCCGTCGAATCCAACACTC
ACACTTCCCTCCCCCCCTCCCTCCCTCTCTGTTCATGCACAGCGCACGTT
TGGAGGCCGAAGAGCGCTCCCTGTTGCGGAACCAAATCAGACAACATTAC
GACCTCCCTTTATTGGATAAGCTTGCCGGTGAGGTCGTGTTTGACGGTCA
TCGATGGCAGGTATGGCTGGGAGGTTTATCGCTGGTAATGAATGCTTTTT
TTGTGTTGTCATGGTACCTGTCGTCGGTGGCGGAGGCGGCGAAGCGAAAG
AAGAAGGCGAAAGGGAGGGACGGGATGAAAACGGAGTAGAGCTCAAGGGA
GGGTAGGAAGGAGACGAGACTGCTGGAAAATTGCGTCGATTTATGACAGA
AAGGGGCTCTATTTGATAAGCGCCACACGGTAATTAACATTAGGGCTATC
GCAAGGTAATACAGCCTTTAACCTTGCCGCGTAATATATGATTAAAAAAC
AATCAATAGTACAGGAAGAAGAC

Coding sequence (CDS) from alignment at chr30:400628..406950-

>NO30G01090.1 ID=NO30G01090.1|Name=NO30G01090.1|organism=Nannochloropsis oceanica|type=CDS|length=2109bp|location=Sequence derived from alignment at chr30:400628..406950- (Nannochloropsis oceanica)
ATGAACCTACCACGGCCCGACGCAGGTCCCGGCCATCCTAAACGTTGTCG
TCTGCCCTTTTCCTTCCATTCCCTGCTCTATTTAGGCATAGTGCTGCTAT
TAGTCTCACTAGACCCTGTCCATTCTGGGGTAATCCGTCTCGATGCCGGG
AACTTTGAGCTGGCCGTGCAGACCTACTCGACGCTTGCAATCCTTTTCCA
TGAGGAGCAGGGAGGAAGTGGCTTAGTGGAAAGATGGGAGCAGGCGGCAC
GCTTGGCCCACGAGAGAATAAGCGCCCAAGGCGACGAAATGGATTTTGCG
GTCATCGAGGCCGACAGCCCAGAGGTGGCCGACCTCGTCGCGTCCTACGG
CTTTTCCCTGCCAAGCGTGCAAATTTTTCGACGACGGGTGATGCACCATT
GGGAGGGGAATGGAGAGCTGAGAGAAGCTACGATAAATGATTTAAGCAAT
GCTCTGGTGGCGGAGGCGGCGCCGGCCGTGCGCTTGGCCTCCTCCATGGA
AGAATTCGACAGGCTCCAGTATTCGACCAACATTCTCGTAGTGGGCCTTT
TCGAGGACGAGGACGAGGAAGGGAGGGAGGAAGGGGGGGATGGCGCCTCG
CTTACCCCCTATGCCGCTTTTGAGGGGGCCGCCGATCAACTTAGAGGTTA
CGCCACATTTGTTCGCGCCCTGCCTGGGGGGGAGGGGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGCGGGGACTGGAGGGAGCAAAGACATGCCG
ATGGAGGGCGAGGGCGAGGTCGAGGGCGAGGAGGAGGAGCAGGGGCGGGA
AGAGAAGGAAGAAGTCCACCTCCTCCTCTACCCTGGGCCGCTCCTGGAAG
CTCCCCTCTCCGACTGGATCCTCTCCCACGACGTGCCGCTCTTCGGCCGT
CTCGGCGGTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCTCCCTCCTTTC
CGAGGAGGAGGGAGGGCTGTTGAGGGGAGGGCTGGGGGGGGGAGAGGCGT
ACGTCCAAAAATTCTTCAACAGTGCGTTGGTCAAGTACGTGGCTTTCGTC
CGGAGAGACCAGGCGAATGCACGACAGCTCCAGGGCCTGGCCACTGTAGC
GGATCGGTACCGGGGCCAAGCGCTCTTTGCCTTCGTGGTGGAAGGGGACT
TTGAAAATGCCTGGGAGTACTTCGAGGTGGATCCCTCCCTCTGTCCCGCC
CTCGTTTTTTTCGACCCCCAAACGAATCACCGCCTCCTCTCCCCCTCCCT
CGCCCCTCTCGAGCAAGGAGAGGTGGCCATCTTCGTGTCATCCACGATGC
GGGGCCTCCCCCCTCCCCTCCCGAAGAGCGAGAGGGAGGAGGTTGAGGAC
GAGAGGAAGAAGAGGCTCGCACCCATCAGCGCCCAGAAACCGGGAGGAGC
TTCCCCTGTCAAGAAATTCGTAGGAAGCAATTTTCTCCGTCGTGTGGCCG
AGGACGGGAAAGACGTGCTGGTGCTGGTGACACGCCCCTTCTGTCAGTCC
TGCATGGACCTCGCGCTGGCCTTTGAGCTTCTCGGAAAAGCTCTTCAGGC
CGAGCCCCGCGTCGTCTTGGGGAAAATCGATGCCCAACTCAACGATCTGC
CCCCTACCGTCCTCCCCCCGCCCTCCCCCCGCCCTCCCCCTCCTCCTCTT
GTTCCCGGCCAAGAACAAGCCATGGAAGGAGGGAGGGGGGGAGGGCGGGA
GGGAGGGAGGGGGGTTCCGATCTTTGTAGCCTTGTCGCAACCGTCGCCCG
CCCTTCAGGATTTGGCTGAATTTTTGACGACGGAGGGTTCGTTTGGGACA
GGGTTAAAGATGGCCACGTTGGAGCAAATGGGCGCGTTGGCCATCGACGA
GGAAGTCATCCGCGCACGTTTGGAGGCCGAAGAGCGCTCCCTGTTGCGGA
ACCAAATCAGACAACATTACGACCTCCCTTTATTGGATAAGCTTGCCGGT
GAGGTCGTGTTTGACGGTCATCGATGGCAGGTATGGCTGGGAGGTTTATC
GCTGGTAATGAATGCTTTTTTTGTGTTGTCATGGTACCTGTCGTCGGTGG
CGGAGGCGGCGAAGCGAAAGAAGAAGGCGAAAGGGAGGGACGGGATGAAA
ACGGAGTAG

Synonyms

Publications