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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr30 | genome | chr30:237952..241206 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO30G00630.2 vs.
Match: GAY05204.1 (quinolinate synthetase A protein, putative [Pythium insidiosum]) HSP 1 Score: 520.4 bits (1339), Expect = 8.300e-144 Identity = 282/493 (57.20%), Postives = 351/493 (71.20%), Query Frame = 0
Query: 175 LVKELDLLLRKKRVGLVAHYYMDPELQGTLASLSWPHVFVADSLAMGEAAAKMAATGEIDAIICMGVDFMSESVRATLDSNVMNQQDGGKEGGRTVPPIPVYRLSEHKIGCSLAEAAERQAYSAFLEKASRGPPSLPPSLPPAPSLHVVYINTSLVTKALSHEILPTITCTSSNVLATLLSAYAQIPNLHVYYGPDTYMGANLEALLQRLAALPPSLPSSLEMVRKLHPAHTPDTIKDLLPRFHYFKQGNCVVHHLFGAEVTERVRTGYPQAYHTAHLEVPGEMFALAMEAAGEGRGVVGSTSNILSFILDKTKEAVRKGGREGGRKRLQFVLGTEAGMVTSIVRGVEKLLKEGEGGREGGVEVEIIFPVAAEAISQTGEGGKEGGLGVVPGVKGGEGCSTAGGCATCPYMKMNSLDALVDVLERCPESSGSGSGEIPASLLPYLPPKREVQLRSGKSLGEVGAMPIVHMRALMKEGRLSEALVQDVLGRAGG 668
+VKELD LL +K++G+VAH+YMDPELQG L+SLSWPH F+ADSLAMGEAAAKMA G I ++ +GVDFMSESVRA LDSN P IPVYRLSE KIGCSLAE+AE+QAY A+L+KA++ P SL HVVYINTSL +KA +H+I+PTITCTSSNV+ T+L A+AQ+P+LHV+YGPDTYMG NL+ + + + LP E +R++HP H TI D+L RF YFK+GNCVVHH+FG +VT+RVR Y A+HTAH EVPGEMF LAMEA GRGVVGSTSNIL+FI DKTKEAV+ E RL+FVLGTEAGM+T+IVRGV+ L+ G ++ EVEIIFPV+A+A++ GE +VPGV+GGEGCSTAGGCATCP+MKMN +DAL V E + +GS L P++ +L SG S+ VG PI+HM++LM+ LS LV+D+ R G
Sbjct: 69 VVKELDALLHEKKMGIVAHFYMDPELQGILSSLSWPHTFIADSLAMGEAAAKMAKKG-IQSVAVLGVDFMSESVRANLDSNGF-------------PHIPVYRLSESKIGCSLAESAEKQAYIAYLQKAAKTPNSL----------HVVYINTSLRSKAFAHDIIPTITCTSSNVVQTILQAFAQVPDLHVWYGPDTYMGENLQQMFEHIVQLPD------EQIRRIHPQHNQKTIADMLTRFDYFKEGNCVVHHMFGDKVTKRVRDEYSDAFHTAHFEVPGEMFTLAMEAQNAGRGVVGSTSNILNFIKDKTKEAVKNESTE----RLKFVLGTEAGMITAIVRGVQDTLRSQPGSKK--PEVEIIFPVSADAVATEGE-------ELVPGVQGGEGCSTAGGCATCPFMKMNDIDALFAVAEGVAPIAPTGS-----DALANFHPQKYSELISGHSISSVGVHPILHMKSLMENRVLSSELVRDIQTRKPG 513
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO30G00630.2 ID=NO30G00630.2|Name=NO30G00630.2|organism=Nannochloropsis oceanica|type=mRNA|length=2878bp TATGTATGGCGGGATGGGTATGAGAAGCTGAAAAGACTGGGTAAAATGTG CCTTATCCAAAGCAACAGATGATCCAACTTGAGAGCAAGGACATCTGTAA TGTCAATACTCGCGTTCCAAGAGTGACAGCCAGGGCTTGACCATACAGCG CGAAATATGGCCGGCGCCGCTCGTAGATACTGAGTAGGCATGCCCATTAG CAATCAAAAAGCCCCCAACAGCCCCCAAAGGGCGTACAACACACGAGCGA CGCACACGCCATGCCAACCCCCTCGCCCACGGGTTCGCAAGGCCTCACAA CCTATAGCGATAGGTGCCTGGATGGTATTATCCAATCGAAAATTTGCTGT GGTTTTTTATTGCTGATTAGACAATTCGACGTTCACAAGGTCAGTTGTGT GTTGTCGCTCACCATATGCGGCCGCGGCCACTTGAGTTTGTGATGCGTAT GGGCTTGGACTCACAAGCAGCAGCATCAAGGCAAGCAAGTATGAGCATGC CGTGGCAGAGGTAGCAGTGGCTCGATGTGACGGCCAGACCAAGCCACGAC GAACTGACTCTACCTCTCTATCTCTCCACCACAAACTCAAACTACAGGAA CACGAGGCGTGGACCATACATTCTGAACCCGTTACCATGGCGTTGGCTTG GAGGAGGTTGGGTGGGCGGATAGGGAGCAGCAGCAGCAGCAGCAGCAGTA GCAGCAGCAGTAGTATTGGTCTAGAGAGGCAAATCTTGCTAGGACTTGGG GTAAGAGAAAGAGGAATGATGACGAGCAGCAGCAAGAGCAATAGCAGTAG AAGAGGCGGATGTCTGACCATGCCGCCACGCGGGCCCCTACGATGGCAGG GGAGCTCCTGCTCCTTCTCCTCAGCTCCGGCCTCACCCCACATAGCCAAC CCCTTCCCTTCGCTCGTCATTTCCGCCACGGAGATCACGGCCAGTGGCTC GTTTGCCGAGACCCAGGCCACGTATTTAAACCCCGATAAGGTACGAGAGG CTTTCTCGCTCCCCCCTTCCTTCCATCGTGTCCCTACGTCTGACTCCCTT TGTGGCGAAGACGACGCGATACACTTTCATTTATTCACCAAAAAACACAT GAAAGTGATGGTGATCACAACTCACCTCTGTCCCTTGACGGCCTCGACCC CCCAGGACCTCGTCAAGGAGCTGGACCTGCTCTTACGGAAGAAGCGCGTG GGCCTGGTGGCGCACTACTACATGGATCCCGAGCTGCAAGGCACGCTGGC CTCCTTGTCCTGGCCCCACGTCTTTGTCGCGGACTCCCTCGCCATGGGGG AAGCTGCCGCCAAGATGGCCGCTACGGGGGAGATCGACGCCATCATCTGC ATGGGTGTGGACTTCATGTCTGAGAGTGTGCGGGCCACTCTGGACTCCAA CGTTATGAACCAGCAGGATGGCGGGAAGGAGGGAGGGAGGACAGTCCCCC CCATCCCTGTCTACCGCCTGTCGGAGCACAAGATCGGCTGCTCCCTGGCC GAGGCGGCCGAGCGGCAAGCCTACAGCGCCTTCCTTGAAAAGGCCTCGAG AGGCCCGCCCTCTCTTCCTCCCTCCCTCCCTCCCGCCCCGTCCCTGCACG TGGTGTACATCAATACCTCCCTCGTGACCAAGGCCCTGTCCCACGAGATT CTGCCCACCATCACCTGCACCAGCAGCAACGTCCTCGCCACTCTCCTCTC TGCCTACGCCCAGATCCCCAATCTCCACGTCTACTACGGCCCCGACACCT ACATGGGCGCCAACCTCGAGGCCCTCCTTCAGAGGCTCGCTGCCCTCCCG CCCTCCCTCCCGTCCTCCCTCGAGATGGTCCGCAAGCTGCACCCGGCACA CACCCCCGACACCATCAAAGACCTCCTGCCGCGCTTCCACTATTTCAAGC AAGGGAACTGCGTGGTGCACCACCTCTTTGGGGCCGAGGTGACGGAGCGG GTGCGCACGGGCTACCCGCAGGCCTACCACACGGCCCATCTGGAGGTGCC CGGGGAGATGTTCGCACTTGCCATGGAGGCCGCGGGAGAGGGCAGGGGCG TGGTAGGGAGCACCAGCAACATCCTCTCCTTCATACTGGACAAGACCAAG GAGGCGGTGAGGAAGGGAGGGAGGGAGGGGGGAAGGAAGCGCCTGCAGTT CGTCTTGGGGACCGAGGCGGGGATGGTCACGTCCATTGTGCGTGGCGTCG AAAAGCTCTTGAAGGAGGGCGAGGGCGGGAGGGAGGGAGGGGTGGAAGTG GAGATCATCTTCCCAGTGGCGGCCGAGGCCATTTCGCAGACAGGGGAGGG AGGGAAGGAGGGAGGACTGGGGGTGGTGCCGGGTGTGAAGGGAGGGGAAG GCTGTAGCACAGCGGGGGGCTGCGCCACCTGCCCTTACATGAAGATGAAC TCCCTCGACGCCCTAGTCGACGTGCTCGAACGCTGCCCCGAGAGCAGCGG CAGCGGTAGCGGCGAGATTCCTGCGTCCCTCCTTCCCTACCTGCCACCGA AGCGCGAAGTGCAGTTGAGGAGTGGAAAGAGCCTGGGAGAGGTGGGGGCG ATGCCTATAGTGCACATGCGGGCGCTGATGAAGGAGGGGAGGCTGTCGGA GGCACTGGTGCAGGACGTGCTGGGGAGAGCAGGAGGGAGGAAGGAGGGGT GAGAGAAAAGGAGTATGAGCGTACCTGTGTGCGTGAGAAAGGGATGATGA AGGGAAGAGTGGATGAGGAGAAGAAGAAGAAGAAGGAGAAGTTGGAGAAG TAGGAGGAGGAAAAGGAGAATGGGGTAATCACGAAAGGACTGGACTTCAA ACAGAGGAAGGCGGCAAGGTAAAAGTGAATGAAAAGAAACCGATGACAAG ATGACCAGAGCAAGCAAGTAGTGATATG back to topprotein sequence of NO30G00630.2 >NO30G00630.2-protein ID=NO30G00630.2-protein|Name=NO30G00630.2|organism=Nannochloropsis oceanica|type=polypeptide|length=672bp MALAWRRLGGRIGSSSSSSSSSSSSSIGLERQILLGLGVRERGMMTSSSK SNSSRRGGCLTMPPRGPLRWQGSSCSFSSAPASPHIANPFPSLVISATEI TASGSFAETQATYLNPDKVREAFSLPPSFHRVPTSDSLCGEDDAIHFHLF TKKHMKVMVITTHLCPLTASTPQDLVKELDLLLRKKRVGLVAHYYMDPEL QGTLASLSWPHVFVADSLAMGEAAAKMAATGEIDAIICMGVDFMSESVRA TLDSNVMNQQDGGKEGGRTVPPIPVYRLSEHKIGCSLAEAAERQAYSAFL EKASRGPPSLPPSLPPAPSLHVVYINTSLVTKALSHEILPTITCTSSNVL ATLLSAYAQIPNLHVYYGPDTYMGANLEALLQRLAALPPSLPSSLEMVRK LHPAHTPDTIKDLLPRFHYFKQGNCVVHHLFGAEVTERVRTGYPQAYHTA HLEVPGEMFALAMEAAGEGRGVVGSTSNILSFILDKTKEAVRKGGREGGR KRLQFVLGTEAGMVTSIVRGVEKLLKEGEGGREGGVEVEIIFPVAAEAIS QTGEGGKEGGLGVVPGVKGGEGCSTAGGCATCPYMKMNSLDALVDVLERC PESSGSGSGEIPASLLPYLPPKREVQLRSGKSLGEVGAMPIVHMRALMKE GRLSEALVQDVLGRAGGRKEG* back to topmRNA from alignment at chr30:237952..241206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO30G00630.2 ID=NO30G00630.2|Name=NO30G00630.2|organism=Nannochloropsis oceanica|type=mRNA|length=3255bp|location=Sequence derived from alignment at chr30:237952..241206- (Nannochloropsis oceanica) TATGTATGGCGGGATGGGTATGAGAAGCTGAAAAGACTGGGTAAAATGTG
CCTTATCCAAAGCAACAGATGATCCAACTTGAGAGCAAGGACATCTGTAA
TGTCAATACTCGCGTTCCAAGAGTGACAGCCAGGGCTTGACCATACAGCG
CGAAATATGGCCGGCGCCGCTCGTAGATACTGAGTAGGCATGCCCATTAG
CAATCAAAAAGCCCCCAACAGCCCCCAAAGGGCGTACAACACACGAGCGA
CGCACACGCCATGCCAACCCCCTCGCCCACGGGTTCGCAAGGCCTCACAA
CCTATAGCGATAGGTGCCTGGATGGTATTATCCAATCGAAAATTTGCTGT
GGTTTTTTATTGCTGATTAGACAATTCGACGTTCACAAGGTCAGTTGTGT
GTTGTCGCTCACCATATGCGGCCGCGGCCACTTGAGTTTGTGATGCGTAT
GGGCTTGGACTCACAAGCAGCAGCATCAAGGCAAGCAAGTATGAGCATGC
CGTGGCAGAGGTAGCAGTGGCTCGATGTGACGGCCAGACCAAGCCACGAC
GAACTGACTCTACCTCTCTATCTCTCCACCACAAACTCAAACTACAGGAA
CACGAGGCGTGGACCATACATTCTGAACCCGTTACCATGGCGTTGGCTTG
GAGGAGGTTGGGTGGGCGGATAGGGAGCAGCAGCAGCAGCAGCAGCAGTA
GCAGCAGCAGTAGTATTGGTCTAGAGAGGCAAATCTTGCTAGGACTTGGG
GTAAGAGAAAGAGGAATGATGACGAGCAGCAGCAAGAGCAATAGCAGTAG
AAGAGGCGGATGTCTGACCATGCCGCCACGCGGGCCCCTACGATGGCAGG
GGAGCTCCTGCTCCTTCTCCTCAGCTCCGGCCTCACCCCACATAGCCAAC
CCCTTCCCTTCGCTCGTCATTTCCGCCACGGAGATCACGGCCAGGTATAA
ATAAGGAGGGAAGGAGGGATAGAGAGTACATAGAACGACTTGAAGACGAA
AGTGATGTGCTCACCTCGACCTGATTCCTCTCTCTGTCTCTGTCTCTGTC
TCTCTCTCTCTCTCTCTCTCTATCTCTTTTTCCCCCCGCCGCTTCTTGTC
GCACACTTGCCAAACCCAGTGGCTCGTTTGCCGAGACCCAGGCCACGTAT
TTAAACCCCGATAAGGTACGAGAGGCTTTCTCGCTCCCCCCTTCCTTCCA
TCGTGTCCCTACGTCTGACTCCCTTTGTGGCGAAGACGACGCGATACACT
TTCATTTATTCACCAAAAAACACATGAAAGTGATGGTGATCACAACTCAC
CTCTGTCCCTTGACGGCCTCGACCCCCCAGGACCTCGTCAAGGAGCTGGA
CCTGCTCTTACGGAAGAAGCGCGTGGGCCTGGTGGCGCACTACTACATGG
ATCCCGAGCTGCAAGGCACGCTGGCCTCCTTGTCCTGGCCCCACGTCTTT
GTCGCGGACTCCCTCGCCATGGGGGAAGCTGCCGCCAAGATGGTAAGGCC
TTCCCTCCTCCCTTCTCCCCTTCCCCCCTCTTCCCTTTCTCTGTTGTCTT
ACCATGCCGTCCCTCTCTTCCTCTTTTCCTTCCTCCCTCTTCCCCCCCCC
CAAGGCCGCTACGGGGGAGATCGACGCCATCATCTGCATGGGTGTGGACT
TCATGTCTGAGAGTGTGCGGGCCACTCTGGACTCCAACGTTATGAACCAG
CAGGATGGCGGGAAGGAGGGAGGGAGGACAGTCCCCCCCATCCCTGTCTA
CCGCCTGTCGGAGCACAAGATCGGCTGCTCCCTGGCCGAGGCGGCCGAGC
GGCAAGCCTACAGCGCCTTCCTTGAAAAGGCCTCGAGAGGCCCGCCCTCT
CTTCCTCCCTCCCTCCCTCCCGCCCCGTCCCTGCACGTGGTGTACATCAA
TACCTCCCTCGTGACCAAGGCCCTGTCCCACGAGATTCTGCCCACCATCA
CCTGCACCAGCAGCAACGTCCTCGCCACTCTCCTCTCTGCCTACGCCCAG
ATCCCCAATCTCCACGTCTACTACGGCCCCGACACCTACATGGGCGCCAA
CCTCGAGGCCCTCCTTCAGAGGCTCGCTGCCCTCCCGCCCTCCCTCCCGT
CCTCCCTCGAGATGGTCCGCAAGCTGCACCCGGCACACACCCCCGACACC
ATCAAAGACCTCCTGCCGCGCTTCCACTATTTCAAGGTACGTGCCCGTGC
CCATCCTCCCTCCCCCTCTCCTCCTCCCCCCTCCCCACCTCCCTCCTTCT
TCTCTCCCTCCAAACCCCCTTCCCAGCAAGGGAACTGCGTGGTGCACCAC
CTCTTTGGGGCCGAGGTGACGGAGCGGGTGCGCACGGGCTACCCGCAGGC
CTACCACACGGCCCATCTGGAGGTGCCCGGGGAGATGTTCGCACTTGCCA
TGGAGGCCGCGGGAGAGGGCAGGGGCGTGGTAGGGAGCACCAGCAACATC
CTCTCCTTCATACTGGACAAGACCAAGGAGGCGGTGAGGAAGGGAGGGAG
GGAGGGGGGAAGGAAGCGCCTGCAGTTCGTCTTGGGGACCGAGGCGGGGA
TGGTCACGTCCATTGTGCGTGGCGTCGAAAAGCTCTTGAAGGAGGGCGAG
GGCGGGAGGGAGGGAGGGGTGGAAGTGGAGATCATCTTCCCAGTGGCGGC
CGAGGCCATTTCGCAGACAGGGGAGGGAGGGAAGGAGGGAGGACTGGGGG
TGGTGCCGGGTGTGAAGGGAGGGGAAGGCTGTAGCACAGCGGGGGGCTGC
GCCACCTGCCCTTACATGAAGATGAACTCCCTCGACGCCCTAGTCGACGT
GCTCGAACGCTGCCCCGAGAGCAGCGGCAGCGGTAGCGGCGAGATTCCTG
CGTCCCTCCTTCCCTACCTGCCACCGAAGCGCGAAGTGCAGTTGAGGAGT
GGAAAGAGCCTGGGAGAGGTGGGGGCGATGCCTATAGTGCACATGCGGGC
GCTGATGAAGGAGGGGAGGCTGTCGGAGGCACTGGTGCAGGACGTGCTGG
GGAGAGCAGGAGGGAGGAAGGAGGGGTGAGAGAAAAGGAGTATGAGCGTA
CCTGTGTGCGTGAGAAAGGGATGATGAAGGGAAGAGTGGATGAGGAGAAG
AAGAAGAAGAAGGAGAAGTTGGAGAAGTAGGAGGAGGAAAAGGAGAATGG
GGTAATCACGAAAGGACTGGACTTCAAACAGAGGAAGGCGGCAAGGTAAA
AGTGAATGAAAAGAAACCGATGACAAGATGACCAGAGCAAGCAAGTAGTG
ATATG back to topCoding sequence (CDS) from alignment at chr30:237952..241206- >NO30G00630.2 ID=NO30G00630.2|Name=NO30G00630.2|organism=Nannochloropsis oceanica|type=CDS|length=2016bp|location=Sequence derived from alignment at chr30:237952..241206- (Nannochloropsis oceanica) ATGGCGTTGGCTTGGAGGAGGTTGGGTGGGCGGATAGGGAGCAGCAGCAG CAGCAGCAGCAGTAGCAGCAGCAGTAGTATTGGTCTAGAGAGGCAAATCT TGCTAGGACTTGGGGTAAGAGAAAGAGGAATGATGACGAGCAGCAGCAAG AGCAATAGCAGTAGAAGAGGCGGATGTCTGACCATGCCGCCACGCGGGCC CCTACGATGGCAGGGGAGCTCCTGCTCCTTCTCCTCAGCTCCGGCCTCAC CCCACATAGCCAACCCCTTCCCTTCGCTCGTCATTTCCGCCACGGAGATC ACGGCCAGTGGCTCGTTTGCCGAGACCCAGGCCACGTATTTAAACCCCGA TAAGGTACGAGAGGCTTTCTCGCTCCCCCCTTCCTTCCATCGTGTCCCTA CGTCTGACTCCCTTTGTGGCGAAGACGACGCGATACACTTTCATTTATTC ACCAAAAAACACATGAAAGTGATGGTGATCACAACTCACCTCTGTCCCTT GACGGCCTCGACCCCCCAGGACCTCGTCAAGGAGCTGGACCTGCTCTTAC GGAAGAAGCGCGTGGGCCTGGTGGCGCACTACTACATGGATCCCGAGCTG CAAGGCACGCTGGCCTCCTTGTCCTGGCCCCACGTCTTTGTCGCGGACTC CCTCGCCATGGGGGAAGCTGCCGCCAAGATGGCCGCTACGGGGGAGATCG ACGCCATCATCTGCATGGGTGTGGACTTCATGTCTGAGAGTGTGCGGGCC ACTCTGGACTCCAACGTTATGAACCAGCAGGATGGCGGGAAGGAGGGAGG GAGGACAGTCCCCCCCATCCCTGTCTACCGCCTGTCGGAGCACAAGATCG GCTGCTCCCTGGCCGAGGCGGCCGAGCGGCAAGCCTACAGCGCCTTCCTT GAAAAGGCCTCGAGAGGCCCGCCCTCTCTTCCTCCCTCCCTCCCTCCCGC CCCGTCCCTGCACGTGGTGTACATCAATACCTCCCTCGTGACCAAGGCCC TGTCCCACGAGATTCTGCCCACCATCACCTGCACCAGCAGCAACGTCCTC GCCACTCTCCTCTCTGCCTACGCCCAGATCCCCAATCTCCACGTCTACTA CGGCCCCGACACCTACATGGGCGCCAACCTCGAGGCCCTCCTTCAGAGGC TCGCTGCCCTCCCGCCCTCCCTCCCGTCCTCCCTCGAGATGGTCCGCAAG CTGCACCCGGCACACACCCCCGACACCATCAAAGACCTCCTGCCGCGCTT CCACTATTTCAAGCAAGGGAACTGCGTGGTGCACCACCTCTTTGGGGCCG AGGTGACGGAGCGGGTGCGCACGGGCTACCCGCAGGCCTACCACACGGCC CATCTGGAGGTGCCCGGGGAGATGTTCGCACTTGCCATGGAGGCCGCGGG AGAGGGCAGGGGCGTGGTAGGGAGCACCAGCAACATCCTCTCCTTCATAC TGGACAAGACCAAGGAGGCGGTGAGGAAGGGAGGGAGGGAGGGGGGAAGG AAGCGCCTGCAGTTCGTCTTGGGGACCGAGGCGGGGATGGTCACGTCCAT TGTGCGTGGCGTCGAAAAGCTCTTGAAGGAGGGCGAGGGCGGGAGGGAGG GAGGGGTGGAAGTGGAGATCATCTTCCCAGTGGCGGCCGAGGCCATTTCG CAGACAGGGGAGGGAGGGAAGGAGGGAGGACTGGGGGTGGTGCCGGGTGT GAAGGGAGGGGAAGGCTGTAGCACAGCGGGGGGCTGCGCCACCTGCCCTT ACATGAAGATGAACTCCCTCGACGCCCTAGTCGACGTGCTCGAACGCTGC CCCGAGAGCAGCGGCAGCGGTAGCGGCGAGATTCCTGCGTCCCTCCTTCC CTACCTGCCACCGAAGCGCGAAGTGCAGTTGAGGAGTGGAAAGAGCCTGG GAGAGGTGGGGGCGATGCCTATAGTGCACATGCGGGCGCTGATGAAGGAG GGGAGGCTGTCGGAGGCACTGGTGCAGGACGTGCTGGGGAGAGCAGGAGG GAGGAAGGAGGGGTGA back to top
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