NO28G00450.1, NO28G00450.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO28G00450.1
Unique NameNO28G00450.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length636
Alignment locationchr28:171638..172273 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:171638..172273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G00450.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00450NO28G00450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO28G00450.1NO28G00450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO28G00450.1.cds1NO28G00450.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO28G00450.1 ID=NO28G00450.1|Name=NO28G00450.1|organism=Nannochloropsis oceanica|type=mRNA|length=636bp
ATGCTTGTACTTCTCCACCTCCGCCCTCCAACACTCCTCCGACAATTTTC
GCTCGCTCTCAATACGCTTGATCTGCGCCGCTGCCAGTCTGATGTCCGCC
GCTCGCTCGCCCTCGAAACGCTCGATGCTCCCCCTGTACCCTGCCGGGGC
CAGGAGTGGCGACGGCGCAGGCGGCCTGTGGTAGTGGAGTTGCACAAGCT
CATCTCTTTGGAAAATTGGGGTGGAAAGCCCTATGATTTGGGGGAAGAGA
CGCTGACGCAGGTGGAGGGGATGCTGGCGGAGGCGCGGACCGTCCTCACG
GCGGAGAGCAACAAGCAGGGCGTGCGTTGTCTTTCTGCCTGGAGGTGGTG
TGGGAGAGCAAAGCGGCACTTGCCAAGTATCACTCCACTCGCGGGCAGCA
CAAGCCGCGCAAGATTAAGCCGAGGGGGAGCGGCAAGGGCAGAAGATCGG
AGCAGGGAAGGTCCGACGCTGCGGCAGTGGTGGAAGATGATGGAGAGGAA
GAAGGGGAGAAGGGAAAGCGGAGGGGGAAGCGGAGGGAGAGGACGAGGGG
GGGGGAGGAGCAGATGCCTCGTGGGAAAGCGACGATCGGATGGGGGGGTT
GCGGGTCCGGCCAGCAAGCGGCGCTACCAAAAATAG
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protein sequence of NO28G00450.1

>NO28G00450.1-protein ID=NO28G00450.1-protein|Name=NO28G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=212bp
MLVLLHLRPPTLLRQFSLALNTLDLRRCQSDVRRSLALETLDAPPVPCRG
QEWRRRRRPVVVELHKLISLENWGGKPYDLGEETLTQVEGMLAEARTVLT
AESNKQGVRCLSAWRWCGRAKRHLPSITPLAGSTSRARLSRGGAARAEDR
SREGPTLRQWWKMMERKKGRRESGGGSGGRGRGGGRSRCLVGKRRSDGGV
AGPASKRRYQK*
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mRNA from alignment at chr28:171638..172273-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO28G00450.1 ID=NO28G00450.1|Name=NO28G00450.1|organism=Nannochloropsis oceanica|type=mRNA|length=636bp|location=Sequence derived from alignment at chr28:171638..172273- (Nannochloropsis oceanica)
ATGCTTGTACTTCTCCACCTCCGCCCTCCAACACTCCTCCGACAATTTTC
GCTCGCTCTCAATACGCTTGATCTGCGCCGCTGCCAGTCTGATGTCCGCC
GCTCGCTCGCCCTCGAAACGCTCGATGCTCCCCCTGTACCCTGCCGGGGC
CAGGAGTGGCGACGGCGCAGGCGGCCTGTGGTAGTGGAGTTGCACAAGCT
CATCTCTTTGGAAAATTGGGGTGGAAAGCCCTATGATTTGGGGGAAGAGA
CGCTGACGCAGGTGGAGGGGATGCTGGCGGAGGCGCGGACCGTCCTCACG
GCGGAGAGCAACAAGCAGGGCGTGCGTTGTCTTTCTGCCTGGAGGTGGTG
TGGGAGAGCAAAGCGGCACTTGCCAAGTATCACTCCACTCGCGGGCAGCA
CAAGCCGCGCAAGATTAAGCCGAGGGGGAGCGGCAAGGGCAGAAGATCGG
AGCAGGGAAGGTCCGACGCTGCGGCAGTGGTGGAAGATGATGGAGAGGAA
GAAGGGGAGAAGGGAAAGCGGAGGGGGAAGCGGAGGGAGAGGACGAGGGG
GGGGGAGGAGCAGATGCCTCGTGGGAAAGCGACGATCGGATGGGGGGGTT
GCGGGTCCGGCCAGCAAGCGGCGCTACCAAAAATAG
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Coding sequence (CDS) from alignment at chr28:171638..172273-

>NO28G00450.1 ID=NO28G00450.1|Name=NO28G00450.1|organism=Nannochloropsis oceanica|type=CDS|length=636bp|location=Sequence derived from alignment at chr28:171638..172273- (Nannochloropsis oceanica)
ATGCTTGTACTTCTCCACCTCCGCCCTCCAACACTCCTCCGACAATTTTC
GCTCGCTCTCAATACGCTTGATCTGCGCCGCTGCCAGTCTGATGTCCGCC
GCTCGCTCGCCCTCGAAACGCTCGATGCTCCCCCTGTACCCTGCCGGGGC
CAGGAGTGGCGACGGCGCAGGCGGCCTGTGGTAGTGGAGTTGCACAAGCT
CATCTCTTTGGAAAATTGGGGTGGAAAGCCCTATGATTTGGGGGAAGAGA
CGCTGACGCAGGTGGAGGGGATGCTGGCGGAGGCGCGGACCGTCCTCACG
GCGGAGAGCAACAAGCAGGGCGTGCGTTGTCTTTCTGCCTGGAGGTGGTG
TGGGAGAGCAAAGCGGCACTTGCCAAGTATCACTCCACTCGCGGGCAGCA
CAAGCCGCGCAAGATTAAGCCGAGGGGGAGCGGCAAGGGCAGAAGATCGG
AGCAGGGAAGGTCCGACGCTGCGGCAGTGGTGGAAGATGATGGAGAGGAA
GAAGGGGAGAAGGGAAAGCGGAGGGGGAAGCGGAGGGAGAGGACGAGGGG
GGGGGAGGAGCAGATGCCTCGTGGGAAAGCGACGATCGGATGGGGGGGTT
GCGGGTCCGGCCAGCAAGCGGCGCTACCAAAAATAG
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Synonyms
Publications