NO27G00510.1, NO27G00510.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO27G00510.1
Unique NameNO27G00510.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length306
Alignment locationchr27:190549..190854 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:190549..190854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G00510.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO27G00510NO27G00510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO27G00510.1NO27G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO27G00510.1.cds1NO27G00510.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO27G00510.1 ID=NO27G00510.1|Name=NO27G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=306bp
ATGACCGAAAGGAGTAGCAGCGCCCAGCAGTACGGCAGCAGCAGCAGCAG
CAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCTGCTGCCACAAGA
CATGTATATACGGACACGAACAAGGAAATAATAAATTTAATACGCCTCCT
CACGCCTCCTTTTCCAGAGTCGTCGAGGGAGGGAAGAACGGAGGGAGTGG
GAATTCATCTGTGGTTCACCAGCCCTCCCGGGCTACCCTCTCAATAAAAG
GAATGACAACAAGATGCTCGACCCAAAAACAAAAGAAGGATAACATTCTG
GCATGA
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protein sequence of NO27G00510.1

>NO27G00510.1-protein ID=NO27G00510.1-protein|Name=NO27G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=102bp
MTERSSSAQQYGSSSSSSSSSSSSSSSSSCCHKTCIYGHEQGNNKFNTPP
HASFSRVVEGGKNGGSGNSSVVHQPSRATLSIKGMTTRCSTQKQKKDNIL
A*
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mRNA from alignment at chr27:190549..190854-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO27G00510.1 ID=NO27G00510.1|Name=NO27G00510.1|organism=Nannochloropsis oceanica|type=mRNA|length=306bp|location=Sequence derived from alignment at chr27:190549..190854- (Nannochloropsis oceanica)
ATGACCGAAAGGAGTAGCAGCGCCCAGCAGTACGGCAGCAGCAGCAGCAG
CAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCTGCTGCCACAAGA
CATGTATATACGGACACGAACAAGGAAATAATAAATTTAATACGCCTCCT
CACGCCTCCTTTTCCAGAGTCGTCGAGGGAGGGAAGAACGGAGGGAGTGG
GAATTCATCTGTGGTTCACCAGCCCTCCCGGGCTACCCTCTCAATAAAAG
GAATGACAACAAGATGCTCGACCCAAAAACAAAAGAAGGATAACATTCTG
GCATGA
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Coding sequence (CDS) from alignment at chr27:190549..190854-

>NO27G00510.1 ID=NO27G00510.1|Name=NO27G00510.1|organism=Nannochloropsis oceanica|type=CDS|length=306bp|location=Sequence derived from alignment at chr27:190549..190854- (Nannochloropsis oceanica)
ATGACCGAAAGGAGTAGCAGCGCCCAGCAGTACGGCAGCAGCAGCAGCAG
CAGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCTGCTGCCACAAGA
CATGTATATACGGACACGAACAAGGAAATAATAAATTTAATACGCCTCCT
CACGCCTCCTTTTCCAGAGTCGTCGAGGGAGGGAAGAACGGAGGGAGTGG
GAATTCATCTGTGGTTCACCAGCCCTCCCGGGCTACCCTCTCAATAAAAG
GAATGACAACAAGATGCTCGACCCAAAAACAAAAGAAGGATAACATTCTG
GCATGA
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Synonyms
Publications