NO27G00330.2, NO27G00330.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00330.2
Unique Name	NO27G00330.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2741
Alignment location	chr27:118902..123882 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:118902..123882 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO27G00330.2 vs.
Match: EWM22966.1 (fad linked oxidase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 587.0 bits (1512), Expect = 6.900e-164
Identity = 284/548 (51.82%), Postives = 377/548 (68.80%), Query Frame = 0

Query:   91 LSESDPAILGGDPNSHFMINFGHNAMANGVRKHHPKTYDEVASLVRSVKAAGGRLRPMGALHSWSNIFPEDDTDVLFLDQFKGLSQDPEDYARVTIQAGVLQSELADWADSKERGYGRFSYLSQAPAITGVTFVGACQTASHGSGFVGESTPDSIIEVTLVDHEGNIKHYSEGDPRIKVLAACLGMCGIILEVTARFNPSTDAVQVTRGRRPLHDLLPPRSVVINESFNPLKDFIEGEGYHGGALSYAPYNSAPEVGIKLEASKIDEYQSRDRIWSTSVQKLPPGTAPRPHRDGI-LFGTQTEPYYDKDTFYPVDYATIVVGSRVPYMVFGEDRFH-KSQPFNPYLANYVSASGNYF---TGIYSDFMYFNTSRAHSQHLVKYLANMAPESTFEFAFKIEDDFANVYEAQRVLIEENDWMFRNRGCLPLSMFSGIRWTEASSCPLSHVYGKPGEKIALMECIAVQGTDGWDEFLQRVFARWSQMRSKKDGSLPKPHWAKWDSRWVPGLLDYIKKVYADQIDMIRPVVLENDPNGLFRNSFLSDMFRLP 634
            L +    + G +P+   + N+  N    G+RKHHPKTYDEVA+LVR  +A G +LR MG  HSWSN+ P+D+TDV+FLD FK ++Q P DY+ VT+QAGVLQSELADWADS  RGYGRFSYL Q   +  +TFVGACQTASHGSGFV   TPD II +T+++  G IK Y    P ++V+AACLGMCGI+L+VT RFNP T A  VT+ +   +DL PPR V IN+S+NPLK FI  E + GGA++Y+PYNSA     KL+ + I+EY   D +W+ +V  L PGT   P RDG+ ++GTQ EP+YDKD F P D+   + GSR+     G+ R + K   ++P++   V+    +    +  Y   + +NTS A S H ++Y+  +     FEFAFK++DDF N+YEA RV+IEE++ M+R +  +PL++F+ IRW  AS CPLSH +GKPGE+ A++E  +  GT GW+E+L+RV ARW+Q+RS KDGSLPKPHWAKW   W P ++ YIK+VYA QI  IRPVVL  DP G+FR S L D+F LP
Sbjct:   75 LVDDSDLVFGDNPDVDTLTNWAQNQKVTGLRKHHPKTYDEVAALVRQKRAEGAKLRVMGVAHSWSNVLPDDNTDVVFLDNFKLITQSPNDYSIVTVQAGVLQSELADWADSPARGYGRFSYLYQNTLVQPITFVGACQTASHGSGFV-PPTPDYIIAMTIINANGEIKFYDSSHPDLRVMAACLGMCGIVLDVTVRFNPDTSATMVTQTKMQYYDLFPPRGVPINDSYNPLKHFI--ESHAGGAINYSPYNSALLRSAKLDVNMIEEYHQSDGVWAHAVDNL-PGTPVCPSRDGLPIWGTQHEPFYDKDLFVPEDWLMNIPGSRIHRSFMGDWRLNSKWANYSPFMGQVVNNQVLFMNPPSFSYRTSVTYNTSNAGSTHFLRYIDGITSGLDFEFAFKVDDDFGNIYEAWRVMIEESENMWREKDMIPLNIFAAIRWVGASECPLSHAFGKPGERFAMLEPTSSHGTTGWEEYLKRVMARWTQIRS-KDGSLPKPHWAKWYKDWTPEVIPYIKQVYAAQIQRIRPVVLRQDPEGIFRTSTLCDIFDLP 617

The following BLAST results are available for this feature:

BLAST of NO27G00330.2 vs.

BLAST of NO27G00330.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22966.1	6.900e-164	51.82	fad linked oxidase domain-containing protein [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00330	NO27G00330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00330.2	NO27G00330.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00330.2.cds1	NO27G00330.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds2	NO27G00330.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds3	NO27G00330.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds4	NO27G00330.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds5	NO27G00330.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds6	NO27G00330.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds7	NO27G00330.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds8	NO27G00330.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds9	NO27G00330.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds10	NO27G00330.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds11	NO27G00330.2.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds12	NO27G00330.2.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds13	NO27G00330.2.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.2.cds14	NO27G00330.2.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:118902..123882+
coding sequence from alignment at chr27:118902..123882+

mRNA sequence

>NO27G00330.2 ID=NO27G00330.2|Name=NO27G00330.2|organism=Nannochloropsis oceanica|type=mRNA|length=2741bp
TGCGGAGGAGACTAGGCATTAAGTGCCAGGCGCGTATGAAAAAAGGGAGG
CTGCTTGCGGGCGGCTTGCCTTCACGGACCGTTGGATTAAGAAAATGATG
CCATCCCGGCAATGAGGGGTCCAATCCCGCAAGGCAAGAAACACATCCTC
CCTTTCAAATACCACAAAACACATCAGCATATTCATTTCATCGACAGACA
TACACATCCTCGCCTTAAGTGCCATCGGCTTAGCTATTTTCAATACAAGA
AGCATGTGTAAACACCCCCGTTCCAAACGTCTCGAGCTACTACTACTACT
TCTACTACACGTCATTCTCATATCCCCTCCCTTTATCACAACCACAGCGA
CGCCATGCGATACCTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCC
TCCTTCTACTTTCCTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAG
GCCCCAAAGCAAAGTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGC
CTCTGCCGTCGTCGATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGTAG
CAGAAAGCCCCCACATAGCAGAAATACAAGCGACAGATGAAGCGGACAAG
TTTGCCTTACCGGGGACTCAGTCCTTGTCTGAATCCGACCCAGCTATTCT
GGGAGGGGACCCGAACAGTCATTTTATGATTAATTTCGGACATAACGCCA
TGGCAAACGGGGTGCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCC
AGCTTGGTCCGGTCCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGG
GGCTCTGCATTCATGGAGCAATATTTTCCCTGAGGACGACACTGACGTGC
TCTTCCTCGATCAGTTTAAAGGCCTCTCTCAGGATCCGGAAGACTATGCA
CGGGTCACTATCCAAGCAGGTGTGCTGCAAAGTGAGCTAGCAGACTGGGC
GGACAGCAAGGAAAGAGGTTATGGTCGGTTCTCGTACTTGAGCCAAGCGC
CGGCGATCACGGGTGTAACGTTTGTAGGAGCGTGCCAGACGGCTTCACAT
GGAAGTGGGTTCGTCGGCGAAAGCACCCCGGACTCTATCATCGAAGTCAC
TCTGGTCGACCACGAGGGAAACATCAAGCACTACTCCGAAGGCGATCCAC
GCATTAAGGTCCTCGCGGCGTGTCTAGGCATGTGCGGTATCATTCTGGAG
GTGACAGCGCGCTTTAACCCTTCGACTGATGCCGTCCAGGTTACGCGTGG
TCGTCGTCCGCTTCATGATCTGCTTCCTCCTCGGTCGGTCGTCATCAACG
AGTCCTTTAACCCGCTCAAGGACTTTATCGAGGGAGAGGGTTATCATGGC
GGGGCGCTCTCGTACGCTCCCTATAACAGCGCGCCAGAAGTGGGAATCAA
GCTGGAAGCTAGCAAGATAGATGAGTATCAATCTAGGGATCGGATCTGGA
GCACTTCCGTGCAGAAGCTGCCACCGGGAACGGCCCCCCGACCTCATCGC
GATGGAATCCTTTTCGGCACCCAAACGGAGCCCTACTACGACAAAGATAC
CTTCTACCCTGTCGATTACGCTACTATCGTCGTAGGCAGCCGGGTACCGT
ACATGGTCTTCGGCGAGGACAGGTTTCACAAGAGCCAACCTTTCAACCCT
TATTTGGCAAATTACGTCTCAGCGAGTGGCAACTACTTTACAGGGATCTA
TTCAGATTTTATGTATTTTAACACGTCCCGCGCCCATTCGCAGCACCTGG
TCAAGTACCTAGCCAACATGGCACCTGAATCTACCTTTGAATTCGCCTTT
AAGATTGAGGATGACTTTGCAAATGTCTATGAGGCCCAACGGGTGTTGAT
TGAGGAGAATGACTGGATGTTCCGCAACCGAGGCTGCTTACCTCTGAGCA
TGTTTTCAGGCATACGATGGACTGAAGCCTCTTCGTGTCCTCTTTCTCAC
GTCTATGGGAAGCCAGGAGAGAAGATTGCTTTGATGGAGTGCATTGCTGT
GCAAGGCACGGATGGATGGGATGAATTCCTTCAGCGTGTGTTTGCACGCT
GGAGTCAAATGCGTAGCAAGAAGGACGGGTCCCTTCCGAAGCCCCATTGG
GCGAAATGGGATAGTCGCTGGGTGCCCGGTCTATTAGATTATATCAAAAA
GGTCTACGCTGACCAGATCGATATGATTCGGCCGGTGGTGCTCGAGAACG
ATCCAAACGGTTTGTTCCGTAACTCATTCTTGAGCGACATGTTTAGACTG
CCCGATGGACATTGATATAATAAGGAGGGAGAGAGGGAGGGACGGGGAGG
AAGGGAGGGAGGGTAAGGACTGTGTTTGGAGAGAATGTACCTATGATGAC
GTGCGTGCGTTCCGTGGCTTTGGGATGTCTAGCTTATGTCCCGATTGCGA
CGTTGAAATGACGATGAATTCCGCACACATGTAGAGTGCGGTTAAAGAGC
AGGTGCACACGTGGAAAAGAGACAGATAAACTGCAAAGGTAAGAAATGTG
GGTGAGCCTAAATGAGTGGAAGGGCCAAGACCTTATAAGAGGTAAGTGGG
CGCAGGTGCACTTGCGGGCTAAGAGGAAGGGGAAGTAAGAACTGAGTTTG
CTTCAGACACAGACAACAGACAAGAGGAAAAATGGAGGGGGTGTTTATAC
AAACACTCCTGTCATTCACCCCCTGATAACATGCGAGAAAAACAGAAAAG
TAAACCAAGTAATTGCGCCACGAGACGGCCACGGGGAATAG

protein sequence of NO27G00330.2

>NO27G00330.2-protein ID=NO27G00330.2-protein|Name=NO27G00330.2|organism=Nannochloropsis oceanica|type=polypeptide|length=637bp
MRYLPWTIRPNLAVILLLLSFSTAHGQTGLRKAPKQSQTGRPIEEATPAS
AVVDVSSSSSSATAVAESPHIAEIQATDEADKFALPGTQSLSESDPAILG
GDPNSHFMINFGHNAMANGVRKHHPKTYDEVASLVRSVKAAGGRLRPMGA
LHSWSNIFPEDDTDVLFLDQFKGLSQDPEDYARVTIQAGVLQSELADWAD
SKERGYGRFSYLSQAPAITGVTFVGACQTASHGSGFVGESTPDSIIEVTL
VDHEGNIKHYSEGDPRIKVLAACLGMCGIILEVTARFNPSTDAVQVTRGR
RPLHDLLPPRSVVINESFNPLKDFIEGEGYHGGALSYAPYNSAPEVGIKL
EASKIDEYQSRDRIWSTSVQKLPPGTAPRPHRDGILFGTQTEPYYDKDTF
YPVDYATIVVGSRVPYMVFGEDRFHKSQPFNPYLANYVSASGNYFTGIYS
DFMYFNTSRAHSQHLVKYLANMAPESTFEFAFKIEDDFANVYEAQRVLIE
ENDWMFRNRGCLPLSMFSGIRWTEASSCPLSHVYGKPGEKIALMECIAVQ
GTDGWDEFLQRVFARWSQMRSKKDGSLPKPHWAKWDSRWVPGLLDYIKKV
YADQIDMIRPVVLENDPNGLFRNSFLSDMFRLPDGH*

mRNA from alignment at chr27:118902..123882+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00330.2 ID=NO27G00330.2|Name=NO27G00330.2|organism=Nannochloropsis oceanica|type=mRNA|length=4981bp|location=Sequence derived from alignment at chr27:118902..123882+ (Nannochloropsis oceanica)
TGCGGAGGAGACTAGGCATTAAGTGCCAGGCGCGTATGAAAAAAGGGAGG
CTGCTTGCGGGCGGCTTGCCTTCACGGACCGTTGGATTAAGAAAATGATG
CCATCCCGGCAATGAGGGGTCCAATCCCGCAAGGCAAGAAACACATCCTC
CCTTTCAAATACCACAAAACACATCAGCATATTCATTTCATCGACAGACA
TACACATCCTCGCCTTAAGTGCCATCGGCTTAGCTATTTTCAATACAAGA
AGCATGTGTAAACACCCCCGTTCCAAACGTCTCGAGCTACTACTACTACT
TCTACTACACGTCATTCTCATATCCCCTCCCTTTATCACAACCACAGCGA
CGCCATGCGATACCTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCC
TCCTTCTACTTTCCTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAG
GCCCCAAAGCAAAGTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGC
CTCTGCCGTCGTCGATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGTAG
CAGAAAGCCCCCACATAGCAGAAATACAAGCGACAGATGAAGCGGACAAG
TTTGCCTTACCGGGGACTCAGTCCTTGTCTGAATCCGACCCAGCTATTCT
GGGAGGGGACCCGAACAGTCATTTTATGATTAATTTCGGACATAACGCCA
TGGCAAACGGGGTGCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCC
AGGTAAAACAATTAAAAAACACGGGAGAGGAAAGAAGGGAAGCAGGGAAG
CAGAAAGACAGAGGACACAGGGGAGAAGATCGCGAGACACACAGAGAGGG
AGAGAGCGCAGGAGAGTGTTGCAGAAAGTGCACGAGTACTCCTTACGCTA
ATTCCCCTCTTACTTACCTACATCTTTTCGAATATCTACACGTCAACCCA
AGCTTGGTCCGGTCCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGG
GGCTCTGCATTCATGGAGCAATATTTTCCCTGAGGACGACACTGACGTGC
TCTTCCTCGATCAGTTTAAAGGTAGGCGTAGCGCACTCTTTCTCCGTGTA
TCTGTCCCTCGTTCCCTTGCTACGTTGCTTGGTTCCATGAGAGGCTGGCG
TTCCCGGAGCAATATCCTGTCGGAATACAACACTGACATCTTTTTCCTTG
GTCTAAAGCAACGATCCATCCTCTCTCCCTCCCTCGCTCACTCCCTCCTA
TTTTCCTTTCCTCCCTGCTTATCTTCATTGCGTGGTTTTTCCTGCTTCAT
CCTGTGATGGTGTGATAATCATCCCCACCTGACCCACATTTGTCTCTTAT
CTTTTGCTCCCTCCTCTTCTTCTTCTCCTCCTGCCCTCTTTCCCTCTCTT
CCTCCCAGGCCTCTCTCAGGATCCGGAAGACTATGCACGGGTCACTATCC
AAGCAGGTGTGCTGCAAAGTGAGCTAGCAGACTGGGCGGACAGCAAGGAA
AGAGGTATGTCTCCGCCCTCCTTCCCTCCCTCCCTCGCCCCTTATGCCTC
TACACGCCTTCCCTTCATTCCTCCCTCCCTCCCTCCCTCCTGCTTTGCCT
CTCTTCCGTCTTCCTTTCTTCTTTCCAGGTTATGGTCGGTTCTCGTACTT
GAGCCAAGCGCCGGCGATCACGGGTGTAACGTTTGTAGGAGCGTGCCAGA
CGGCTTCACATGGAAGGTAACGAGAAATGAGAGGAGAGGGGGGCAGGGAC
GCATTTCCTCCACCCTGGTCCGTTCCCTACTTTCCGCTCCCCTCGGCCTT
TTTATTTTGATCCTTTTCTATGGACATGAGTACTGTGACTTTGCGTATGA
TTCTCTGCCATTGGTCCCTCGAGCAGATGGAACAGGGGCCGAAGGAGATA
TAAGGGATACGGCATGCTTTACCCGCCATTTCTTTACTGCAACAATCATC
CATCTCTCTCCATAAACTCTAACCTCCGTTATGGATACAACTACAAATAC
AGTGGGTTCGTCGGCGAAAGCACCCCGGACTCTATCATCGAAGTCACTCT
GGTCGACCACGAGGGAAACATCAAGCACTACTCCGAAGGCGATCCACGCA
TTAAGGTAGATCAAGAGGAAGAGAGAGGACCCAGAGCATTATTTGGAGTG
TTCAAGCTGAGCATCCCTCCTTTCTTCTCTCTCTCTCTCTCTCTCTCTCG
TCCTCTTTTCCTTCTTTTTCTCGTCCTAGGTCCTCGCGGCGTGTCTAGGC
ATGTGCGGTATCATTCTGGAGGTGACAGCGCGCTTTAACCCTTCGACTGA
TGCCGTCCAGGTTACGCGTGGTCGTCGTCCGCTTCATGATCTGCTTCCTC
CTCGGTCGGTCGTCATCAACGAGTCCTTTAACCCGCTCAAGGACTTTATC
GAGGGAGAGGGTTATCATGGCGGGGCGCTCTCGTACGCTCCCTATAACAG
CGCGCCAGAAGTGGGAATCAAGCTGGAAGCTAGCAAGATAGATGAGTATC
AATCTAGGGTGCGTCCTTGGTTGTTCTCTTTCCCCTGTTCTTTCCCTAAG
TCAATATCTCCCTCCCTCGTTTTCTCCCCCTCTACCATACTCTTCAACCT
GTCTGCCAACCGACATTACATTTGCACGCTCGGTTCTTTTTGCTTTTGCT
TTCGGCAATCTTACATTGACTGTTCGGCATATACTTAATTACCACTCGTT
TCCGCCCACCATCTCTGTTCTCCTCCCTTTTGTCCCTCAAGGATCGGATC
TGGAGCACTTCCGTGCAGAAGCTGCCACCGGTAAGTAGGAAAAAGAAATA
AAAATGCATAGGAATGCATGTCTGCACTTTGGGGATTATGCGAGAAAACA
GTGGCAGGTGCTTTGGTGGACGGTAGAAAGCACAGAAGAAAGGAAATAGG
GAGAAAGAAGAGATCTCATCTTACAATTTCATTATTATTTTCCTTTAATT
ACCCCATGGCAAAATAAGGGAACGGCCCCCCGACCTCATCGCGATGGAAT
CCTTTTCGGCACCCAAACGGAGCCCTACTACGACAAAGGTAGATAGCTCT
TCTTCAAGTCTACTCTCGCTAGATCTCATCACTGTCTCTATTCCTCTGAT
CTTCCCCGCCTCCAGATACCTTCTACCCTGTCGATTACGCTACTATCGTC
GTAGGCAGCCGGGTACCGTACATGGTCTTCGGCGAGGACAGGTTGGTGGA
CAGTTTATCCCCCCGGTTTCCCCTCCGTCCCTCTCTCCGTCTTTTACATA
TTCTCCCTCACACTTTTCTTCAGGTTTCACAAGAGCCAACCTTTCAACCC
TTATTTGGCAAATTACGTCTCAGCGAGTGGCAACTACTTTACAGGGATCT
ATTCAGATTTTATGTAAGGAAGGATGGGGGATAGGAGGAAGAAAAGGTGT
GATAGAGAGAAACAGGGAACCTTATACCGTCTATTATTTTATGTATTATT
TTAAAATTAGCTTTCACTTTTTATTTCCCCCTTATTCAGGTATTTTAACA
CGTCCCGCGCCCATTCGCAGCACCTGGTCAAGTACCTAGCCAACATGGCA
CCTGAATCTACCTTTGAATTCGCCTTTAAGATTGAGGATGACTTTGCAAA
TGTCTATGAGGTAGGAAGGAAAGAAGGGAGATTGCCAGAAAATTACGCAA
TACAATTGCAGTACCAAGTCTAATTCCATTTTGCTGTTTTTTTCCCACCC
TACAGGCCCAACGGGTGTTGATTGAGGAGAATGACTGGATGTTCCGCAAC
CGAGGCTGCTTACCTCTGAGCATGTTTTCAGGCATACGATGGACTGAAGC
CTCTTCGTGTCCTCTTTCTCACGTCTATGGGAAGCCAGGAGAGAAGATTG
CTTTGATGGAGTGCATTGCTGTGCAAGGCACGGATGGTACGTGTAGCTCT
TATTCAAGTTTACCATGTTCTTCAAAATAATGTAATACGTTGGCGTTTGC
TCAGTCTGCGGAAAACTGTTACCATGTTGTAATTGTTTGAGCTACGAGCG
CGATGTATGGCATAGTAGGTTTGAATTTCACGCTGTACCTTTTGAGAATG
AGTGTGCGGCTGGGGATCCAATGAGATATTGAAAATTTATTAATACTCAT
GCTGTATTTCCTCGCCCATTACTTACAGGATGGGATGAATTCCTTCAGCG
TGTGTTTGCACGCTGGAGTCAAATGCGTAGCAAGAAGGACGGGTCCCTTC
CGAAGCCCCATTGGGCGAAATGGGATAGTCGCTGGGTGCCCGGTCTATTA
GATTATATCAAAAAGGTGAATATAAATGCAGGAAAAGGAGGCGTAGATGA
AAGAGTTGAAATGAAGAGAGACGCAGTAATGATCTCACACACTCATCTTT
CCTCCCTCCTTGTTTCCGGTTCCCTTTTCATCCCTTCCCAGGTCTACGCT
GACCAGATCGATATGATTCGGCCGGTGGTGCTCGAGAACGATCCAAACGG
TTTGTTCCGTAACTCATTCTTGAGCGACATGTTTAGACTGCCCGATGGAC
ATTGATATAATAAGGAGGGAGAGAGGGAGGGACGGGGAGGAAGGGAGGGA
GGGTAAGGACTGTGTTTGGAGAGAATGTACCTATGATGACGTGCGTGCGT
TCCGTGGCTTTGGGATGTCTAGCTTATGTCCCGATTGCGACGTTGAAATG
ACGATGAATTCCGCACACATGTAGAGTGCGGTTAAAGAGCAGGTGCACAC
GTGGAAAAGAGACAGATAAACTGCAAAGGTAAGAAATGTGGGTGAGCCTA
AATGAGTGGAAGGGCCAAGACCTTATAAGAGGTAAGTGGGCGCAGGTGCA
CTTGCGGGCTAAGAGGAAGGGGAAGTAAGAACTGAGTTTGCTTCAGACAC
AGACAACAGACAAGAGGAAAAATGGAGGGGGTGTTTATACAAACACTCCT
GTCATTCACCCCCTGATAACATGCGAGAAAAACAGAAAAGTAAACCAAGT
AATTGCGCCACGAGACGGCCACGGGGAATAG

Coding sequence (CDS) from alignment at chr27:118902..123882+

>NO27G00330.2 ID=NO27G00330.2|Name=NO27G00330.2|organism=Nannochloropsis oceanica|type=CDS|length=1911bp|location=Sequence derived from alignment at chr27:118902..123882+ (Nannochloropsis oceanica)
ATGCGATACCTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCCTCCT
TCTACTTTCCTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAGGCCC
CAAAGCAAAGTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGCCTCT
GCCGTCGTCGATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGTAGCAGA
AAGCCCCCACATAGCAGAAATACAAGCGACAGATGAAGCGGACAAGTTTG
CCTTACCGGGGACTCAGTCCTTGTCTGAATCCGACCCAGCTATTCTGGGA
GGGGACCCGAACAGTCATTTTATGATTAATTTCGGACATAACGCCATGGC
AAACGGGGTGCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCCAGCT
TGGTCCGGTCCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGGGGCT
CTGCATTCATGGAGCAATATTTTCCCTGAGGACGACACTGACGTGCTCTT
CCTCGATCAGTTTAAAGGCCTCTCTCAGGATCCGGAAGACTATGCACGGG
TCACTATCCAAGCAGGTGTGCTGCAAAGTGAGCTAGCAGACTGGGCGGAC
AGCAAGGAAAGAGGTTATGGTCGGTTCTCGTACTTGAGCCAAGCGCCGGC
GATCACGGGTGTAACGTTTGTAGGAGCGTGCCAGACGGCTTCACATGGAA
GTGGGTTCGTCGGCGAAAGCACCCCGGACTCTATCATCGAAGTCACTCTG
GTCGACCACGAGGGAAACATCAAGCACTACTCCGAAGGCGATCCACGCAT
TAAGGTCCTCGCGGCGTGTCTAGGCATGTGCGGTATCATTCTGGAGGTGA
CAGCGCGCTTTAACCCTTCGACTGATGCCGTCCAGGTTACGCGTGGTCGT
CGTCCGCTTCATGATCTGCTTCCTCCTCGGTCGGTCGTCATCAACGAGTC
CTTTAACCCGCTCAAGGACTTTATCGAGGGAGAGGGTTATCATGGCGGGG
CGCTCTCGTACGCTCCCTATAACAGCGCGCCAGAAGTGGGAATCAAGCTG
GAAGCTAGCAAGATAGATGAGTATCAATCTAGGGATCGGATCTGGAGCAC
TTCCGTGCAGAAGCTGCCACCGGGAACGGCCCCCCGACCTCATCGCGATG
GAATCCTTTTCGGCACCCAAACGGAGCCCTACTACGACAAAGATACCTTC
TACCCTGTCGATTACGCTACTATCGTCGTAGGCAGCCGGGTACCGTACAT
GGTCTTCGGCGAGGACAGGTTTCACAAGAGCCAACCTTTCAACCCTTATT
TGGCAAATTACGTCTCAGCGAGTGGCAACTACTTTACAGGGATCTATTCA
GATTTTATGTATTTTAACACGTCCCGCGCCCATTCGCAGCACCTGGTCAA
GTACCTAGCCAACATGGCACCTGAATCTACCTTTGAATTCGCCTTTAAGA
TTGAGGATGACTTTGCAAATGTCTATGAGGCCCAACGGGTGTTGATTGAG
GAGAATGACTGGATGTTCCGCAACCGAGGCTGCTTACCTCTGAGCATGTT
TTCAGGCATACGATGGACTGAAGCCTCTTCGTGTCCTCTTTCTCACGTCT
ATGGGAAGCCAGGAGAGAAGATTGCTTTGATGGAGTGCATTGCTGTGCAA
GGCACGGATGGATGGGATGAATTCCTTCAGCGTGTGTTTGCACGCTGGAG
TCAAATGCGTAGCAAGAAGGACGGGTCCCTTCCGAAGCCCCATTGGGCGA
AATGGGATAGTCGCTGGGTGCCCGGTCTATTAGATTATATCAAAAAGGTC
TACGCTGACCAGATCGATATGATTCGGCCGGTGGTGCTCGAGAACGATCC
AAACGGTTTGTTCCGTAACTCATTCTTGAGCGACATGTTTAGACTGCCCG
ATGGACATTGA

Synonyms

Publications