NO27G00330.1, NO27G00330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G00330.1
Unique Name	NO27G00330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2344
Alignment location	chr27:118410..123406 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:118410..123406 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO27G00330.1 vs.
Match: EWM22966.1 (fad linked oxidase domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 587.0 bits (1512), Expect = 7.900e-164
Identity = 284/548 (51.82%), Postives = 377/548 (68.80%), Query Frame = 0

Query:  184 LSESDPAILGGDPNSHFMINFGHNAMANGVRKHHPKTYDEVASLVRSVKAAGGRLRPMGALHSWSNIFPEDDTDVLFLDQFKGLSQDPEDYARVTIQAGVLQSELADWADSKERGYGRFSYLSQAPAITGVTFVGACQTASHGSGFVGESTPDSIIEVTLVDHEGNIKHYSEGDPRIKVLAACLGMCGIILEVTARFNPSTDAVQVTRGRRPLHDLLPPRSVVINESFNPLKDFIEGEGYHGGALSYAPYNSAPEVGIKLEASKIDEYQSRDRIWSTSVQKLPPGTAPRPHRDGI-LFGTQTEPYYDKDTFYPVDYATIVVGSRVPYMVFGEDRFH-KSQPFNPYLANYVSASGNYF---TGIYSDFMYFNTSRAHSQHLVKYLANMAPESTFEFAFKIEDDFANVYEAQRVLIEENDWMFRNRGCLPLSMFSGIRWTEASSCPLSHVYGKPGEKIALMECIAVQGTDGWDEFLQRVFARWSQMRSKKDGSLPKPHWAKWDSRWVPGLLDYIKKVYADQIDMIRPVVLENDPNGLFRNSFLSDMFRLP 727
            L +    + G +P+   + N+  N    G+RKHHPKTYDEVA+LVR  +A G +LR MG  HSWSN+ P+D+TDV+FLD FK ++Q P DY+ VT+QAGVLQSELADWADS  RGYGRFSYL Q   +  +TFVGACQTASHGSGFV   TPD II +T+++  G IK Y    P ++V+AACLGMCGI+L+VT RFNP T A  VT+ +   +DL PPR V IN+S+NPLK FI  E + GGA++Y+PYNSA     KL+ + I+EY   D +W+ +V  L PGT   P RDG+ ++GTQ EP+YDKD F P D+   + GSR+     G+ R + K   ++P++   V+    +    +  Y   + +NTS A S H ++Y+  +     FEFAFK++DDF N+YEA RV+IEE++ M+R +  +PL++F+ IRW  AS CPLSH +GKPGE+ A++E  +  GT GW+E+L+RV ARW+Q+RS KDGSLPKPHWAKW   W P ++ YIK+VYA QI  IRPVVL  DP G+FR S L D+F LP
Sbjct:   75 LVDDSDLVFGDNPDVDTLTNWAQNQKVTGLRKHHPKTYDEVAALVRQKRAEGAKLRVMGVAHSWSNVLPDDNTDVVFLDNFKLITQSPNDYSIVTVQAGVLQSELADWADSPARGYGRFSYLYQNTLVQPITFVGACQTASHGSGFV-PPTPDYIIAMTIINANGEIKFYDSSHPDLRVMAACLGMCGIVLDVTVRFNPDTSATMVTQTKMQYYDLFPPRGVPINDSYNPLKHFI--ESHAGGAINYSPYNSALLRSAKLDVNMIEEYHQSDGVWAHAVDNL-PGTPVCPSRDGLPIWGTQHEPFYDKDLFVPEDWLMNIPGSRIHRSFMGDWRLNSKWANYSPFMGQVVNNQVLFMNPPSFSYRTSVTYNTSNAGSTHFLRYIDGITSGLDFEFAFKVDDDFGNIYEAWRVMIEESENMWREKDMIPLNIFAAIRWVGASECPLSHAFGKPGERFAMLEPTSSHGTTGWEEYLKRVMARWTQIRS-KDGSLPKPHWAKWYKDWTPEVIPYIKQVYAAQIQRIRPVVLRQDPEGIFRTSTLCDIFDLP 617

The following BLAST results are available for this feature:

BLAST of NO27G00330.1 vs.

BLAST of NO27G00330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22966.1	7.900e-164	51.82	fad linked oxidase domain-containing protein [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G00330	NO27G00330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00330.1	NO27G00330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G00330.1.cds1	NO27G00330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds2	NO27G00330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds3	NO27G00330.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds4	NO27G00330.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds5	NO27G00330.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds6	NO27G00330.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds7	NO27G00330.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds8	NO27G00330.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds9	NO27G00330.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds10	NO27G00330.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds11	NO27G00330.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds12	NO27G00330.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds13	NO27G00330.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds14	NO27G00330.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G00330.1.cds15	NO27G00330.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:118410..123406+
coding sequence from alignment at chr27:118410..123406+

mRNA sequence

>NO27G00330.1 ID=NO27G00330.1|Name=NO27G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=2344bp
CCCCTACTTGCTTCGATGCTGTACATTTCTTTTCTTCAGACCTCCTCATC
CGCTCTTTCTCTCTCGAGCTCACTACCTCCGCCACCAAACTGCCTCCTCT
CCCTACTATCTTCCTTTACCATCTCCTCATACCTCTCATTTGGTTCTGGA
AACCATGCTTTCCTTGAGTCCTCTTCCCCCTCCAAGAATACCATTCAACA
ATTCTTCCATTGCTTGCTCTGGATGTCCTTCCCTACCTTTGTCTTGTGGT
GCTCGCACCTGCAGCAGCAGCAGCAGCAGCAGCTGCACAGGTGCTTATGT
AGGCTGGCAATTTCTAGAGCGGCAGCACTTTAGCAGCAGCGCAGTAGCAG
CAGCAGCAGGAACAGTAGCACAAGATGTGGATGATGGCCTGGGTCGAGAG
CTTATACTGCCTGTTTATCTCAATATCGACGCCATGCGATACCTTCCCTG
GACAATAAGACCGAACTTGGCCGTAATCCTCCTTCTACTTTCCTTTTCGA
CCGCGCACGGGCAAACAGGCCTCCGGAAGGCCCCAAAGCAAAGTCAGACT
GGACGGCCCATCGAGGAGGCTACTCCTGCCTCTGCCGTCGTCGATGTCTC
CTCCTCTTCCTCCTCCGCCACAGCAGTAGCAGAAAGCCCCCACATAGCAG
AAATACAAGCGACAGATGAAGCGGACAAGTTTGCCTTACCGGGGACTCAG
TCCTTGTCTGAATCCGACCCAGCTATTCTGGGAGGGGACCCGAACAGTCA
TTTTATGATTAATTTCGGACATAACGCCATGGCAAACGGGGTGCGGAAGC
ACCATCCGAAGACGTATGATGAGGTGGCCAGCTTGGTCCGGTCCGTCAAG
GCCGCAGGCGGGCGACTCCGTCCTATGGGGGCTCTGCATTCATGGAGCAA
TATTTTCCCTGAGGACGACACTGACGTGCTCTTCCTCGATCAGTTTAAAG
GCCTCTCTCAGGATCCGGAAGACTATGCACGGGTCACTATCCAAGCAGGT
GTGCTGCAAAGTGAGCTAGCAGACTGGGCGGACAGCAAGGAAAGAGGTTA
TGGTCGGTTCTCGTACTTGAGCCAAGCGCCGGCGATCACGGGTGTAACGT
TTGTAGGAGCGTGCCAGACGGCTTCACATGGAAGTGGGTTCGTCGGCGAA
AGCACCCCGGACTCTATCATCGAAGTCACTCTGGTCGACCACGAGGGAAA
CATCAAGCACTACTCCGAAGGCGATCCACGCATTAAGGTCCTCGCGGCGT
GTCTAGGCATGTGCGGTATCATTCTGGAGGTGACAGCGCGCTTTAACCCT
TCGACTGATGCCGTCCAGGTTACGCGTGGTCGTCGTCCGCTTCATGATCT
GCTTCCTCCTCGGTCGGTCGTCATCAACGAGTCCTTTAACCCGCTCAAGG
ACTTTATCGAGGGAGAGGGTTATCATGGCGGGGCGCTCTCGTACGCTCCC
TATAACAGCGCGCCAGAAGTGGGAATCAAGCTGGAAGCTAGCAAGATAGA
TGAGTATCAATCTAGGGATCGGATCTGGAGCACTTCCGTGCAGAAGCTGC
CACCGGGAACGGCCCCCCGACCTCATCGCGATGGAATCCTTTTCGGCACC
CAAACGGAGCCCTACTACGACAAAGATACCTTCTACCCTGTCGATTACGC
TACTATCGTCGTAGGCAGCCGGGTACCGTACATGGTCTTCGGCGAGGACA
GGTTTCACAAGAGCCAACCTTTCAACCCTTATTTGGCAAATTACGTCTCA
GCGAGTGGCAACTACTTTACAGGGATCTATTCAGATTTTATGTATTTTAA
CACGTCCCGCGCCCATTCGCAGCACCTGGTCAAGTACCTAGCCAACATGG
CACCTGAATCTACCTTTGAATTCGCCTTTAAGATTGAGGATGACTTTGCA
AATGTCTATGAGGCCCAACGGGTGTTGATTGAGGAGAATGACTGGATGTT
CCGCAACCGAGGCTGCTTACCTCTGAGCATGTTTTCAGGCATACGATGGA
CTGAAGCCTCTTCGTGTCCTCTTTCTCACGTCTATGGGAAGCCAGGAGAG
AAGATTGCTTTGATGGAGTGCATTGCTGTGCAAGGCACGGATGGATGGGA
TGAATTCCTTCAGCGTGTGTTTGCACGCTGGAGTCAAATGCGTAGCAAGA
AGGACGGGTCCCTTCCGAAGCCCCATTGGGCGAAATGGGATAGTCGCTGG
GTGCCCGGTCTATTAGATTATATCAAAAAGGTCTACGCTGACCAGATCGA
TATGATTCGGCCGGTGGTGCTCGAGAACGATCCAAACGGTTTGTTCCGTA
ACTCATTCTTGAGCGACATGTTTAGACTGCCCGATGGACATTGA

protein sequence of NO27G00330.1

>NO27G00330.1-protein ID=NO27G00330.1-protein|Name=NO27G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=730bp
MLSLSPLPPPRIPFNNSSIACSGCPSLPLSCGARTCSSSSSSSCTGAYVG
WQFLERQHFSSSAVAAAAGTVAQDVDDGLGRELILPVYLNIDAMRYLPWT
IRPNLAVILLLLSFSTAHGQTGLRKAPKQSQTGRPIEEATPASAVVDVSS
SSSSATAVAESPHIAEIQATDEADKFALPGTQSLSESDPAILGGDPNSHF
MINFGHNAMANGVRKHHPKTYDEVASLVRSVKAAGGRLRPMGALHSWSNI
FPEDDTDVLFLDQFKGLSQDPEDYARVTIQAGVLQSELADWADSKERGYG
RFSYLSQAPAITGVTFVGACQTASHGSGFVGESTPDSIIEVTLVDHEGNI
KHYSEGDPRIKVLAACLGMCGIILEVTARFNPSTDAVQVTRGRRPLHDLL
PPRSVVINESFNPLKDFIEGEGYHGGALSYAPYNSAPEVGIKLEASKIDE
YQSRDRIWSTSVQKLPPGTAPRPHRDGILFGTQTEPYYDKDTFYPVDYAT
IVVGSRVPYMVFGEDRFHKSQPFNPYLANYVSASGNYFTGIYSDFMYFNT
SRAHSQHLVKYLANMAPESTFEFAFKIEDDFANVYEAQRVLIEENDWMFR
NRGCLPLSMFSGIRWTEASSCPLSHVYGKPGEKIALMECIAVQGTDGWDE
FLQRVFARWSQMRSKKDGSLPKPHWAKWDSRWVPGLLDYIKKVYADQIDM
IRPVVLENDPNGLFRNSFLSDMFRLPDGH*

mRNA from alignment at chr27:118410..123406+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G00330.1 ID=NO27G00330.1|Name=NO27G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4997bp|location=Sequence derived from alignment at chr27:118410..123406+ (Nannochloropsis oceanica)
CCCCTACTTGCTTCGATGCTGTACATTTCTTTTCTTCAGACCTCCTCATC
CGCTCTTTCTCTCTCGAGCTCACTACCTCCGCCACCAAACTGCCTCCTCT
CCCTACTATCTTCCTTTACCATCTCCTCATACCTCTCATTTGGTTCTGGA
AACCATGCTTTCCTTGAGTCCTCTTCCCCCTCCAAGAATACCATTCAACA
ATTCTTCCATTGCTTGCTCTGGATGTCCTTCCCTACCTTTGTCTTGTGGT
GCTCGCACCTGCAGCAGCAGCAGCAGCAGCAGCTGCACAGGTGCTTATGT
AGGCTGGCAATTTCTAGAGCGGCAGCACTTTAGCAGCAGCGCAGTAGCAG
CAGCAGCAGGAACAGTAGCACAAGATGTGGATGATGGCCTGGGTCGAGAG
CTTATACTGCCTGTTTATCTCAATATGTGAATGAGGAAGCGTGGAAAGAT
CAGCAAGGGCGAGGCATGTACCGCATCTAGGTGGTATGTGTGTGCGGAGG
AGACTAGGCATTAAGTGCCAGGCGCGTATGAAAAAAGGGAGGCTGCTTGC
GGGCGGCTTGCCTTCACGGACCGTTGGATTAAGAAAATGATGCCATCCCG
GCAATGAGGGGTCCAATCCCGCAAGGCAAGAAACACATCCTCCCTTTCAA
ATACCACAAAACACATCAGCATATTCATTTCATCGACAGACATACACATC
CTCGCCTTAAGTGCCATCGGCTTAGCTATTTTCAATACAAGAAGCATGTG
TAAACACCCCCGTTCCAAACGTCTCGAGCTACTACTACTACTTCTACTAC
ACGTCATTCTCATATCCCCTCCCTTTATCACAACCACAGCGACGCCATGC
GATACCTTCCCTGGACAATAAGACCGAACTTGGCCGTAATCCTCCTTCTA
CTTTCCTTTTCGACCGCGCACGGGCAAACAGGCCTCCGGAAGGCCCCAAA
GCAAAGTCAGACTGGACGGCCCATCGAGGAGGCTACTCCTGCCTCTGCCG
TCGTCGATGTCTCCTCCTCTTCCTCCTCCGCCACAGCAGTAGCAGAAAGC
CCCCACATAGCAGAAATACAAGCGACAGATGAAGCGGACAAGTTTGCCTT
ACCGGGGACTCAGTCCTTGTCTGAATCCGACCCAGCTATTCTGGGAGGGG
ACCCGAACAGTCATTTTATGATTAATTTCGGACATAACGCCATGGCAAAC
GGGGTGCGGAAGCACCATCCGAAGACGTATGATGAGGTGGCCAGGTAAAA
CAATTAAAAAACACGGGAGAGGAAAGAAGGGAAGCAGGGAAGCAGAAAGA
CAGAGGACACAGGGGAGAAGATCGCGAGACACACAGAGAGGGAGAGAGCG
CAGGAGAGTGTTGCAGAAAGTGCACGAGTACTCCTTACGCTAATTCCCCT
CTTACTTACCTACATCTTTTCGAATATCTACACGTCAACCCAAGCTTGGT
CCGGTCCGTCAAGGCCGCAGGCGGGCGACTCCGTCCTATGGGGGCTCTGC
ATTCATGGAGCAATATTTTCCCTGAGGACGACACTGACGTGCTCTTCCTC
GATCAGTTTAAAGGTAGGCGTAGCGCACTCTTTCTCCGTGTATCTGTCCC
TCGTTCCCTTGCTACGTTGCTTGGTTCCATGAGAGGCTGGCGTTCCCGGA
GCAATATCCTGTCGGAATACAACACTGACATCTTTTTCCTTGGTCTAAAG
CAACGATCCATCCTCTCTCCCTCCCTCGCTCACTCCCTCCTATTTTCCTT
TCCTCCCTGCTTATCTTCATTGCGTGGTTTTTCCTGCTTCATCCTGTGAT
GGTGTGATAATCATCCCCACCTGACCCACATTTGTCTCTTATCTTTTGCT
CCCTCCTCTTCTTCTTCTCCTCCTGCCCTCTTTCCCTCTCTTCCTCCCAG
GCCTCTCTCAGGATCCGGAAGACTATGCACGGGTCACTATCCAAGCAGGT
GTGCTGCAAAGTGAGCTAGCAGACTGGGCGGACAGCAAGGAAAGAGGTAT
GTCTCCGCCCTCCTTCCCTCCCTCCCTCGCCCCTTATGCCTCTACACGCC
TTCCCTTCATTCCTCCCTCCCTCCCTCCCTCCTGCTTTGCCTCTCTTCCG
TCTTCCTTTCTTCTTTCCAGGTTATGGTCGGTTCTCGTACTTGAGCCAAG
CGCCGGCGATCACGGGTGTAACGTTTGTAGGAGCGTGCCAGACGGCTTCA
CATGGAAGGTAACGAGAAATGAGAGGAGAGGGGGGCAGGGACGCATTTCC
TCCACCCTGGTCCGTTCCCTACTTTCCGCTCCCCTCGGCCTTTTTATTTT
GATCCTTTTCTATGGACATGAGTACTGTGACTTTGCGTATGATTCTCTGC
CATTGGTCCCTCGAGCAGATGGAACAGGGGCCGAAGGAGATATAAGGGAT
ACGGCATGCTTTACCCGCCATTTCTTTACTGCAACAATCATCCATCTCTC
TCCATAAACTCTAACCTCCGTTATGGATACAACTACAAATACAGTGGGTT
CGTCGGCGAAAGCACCCCGGACTCTATCATCGAAGTCACTCTGGTCGACC
ACGAGGGAAACATCAAGCACTACTCCGAAGGCGATCCACGCATTAAGGTA
GATCAAGAGGAAGAGAGAGGACCCAGAGCATTATTTGGAGTGTTCAAGCT
GAGCATCCCTCCTTTCTTCTCTCTCTCTCTCTCTCTCTCTCGTCCTCTTT
TCCTTCTTTTTCTCGTCCTAGGTCCTCGCGGCGTGTCTAGGCATGTGCGG
TATCATTCTGGAGGTGACAGCGCGCTTTAACCCTTCGACTGATGCCGTCC
AGGTTACGCGTGGTCGTCGTCCGCTTCATGATCTGCTTCCTCCTCGGTCG
GTCGTCATCAACGAGTCCTTTAACCCGCTCAAGGACTTTATCGAGGGAGA
GGGTTATCATGGCGGGGCGCTCTCGTACGCTCCCTATAACAGCGCGCCAG
AAGTGGGAATCAAGCTGGAAGCTAGCAAGATAGATGAGTATCAATCTAGG
GTGCGTCCTTGGTTGTTCTCTTTCCCCTGTTCTTTCCCTAAGTCAATATC
TCCCTCCCTCGTTTTCTCCCCCTCTACCATACTCTTCAACCTGTCTGCCA
ACCGACATTACATTTGCACGCTCGGTTCTTTTTGCTTTTGCTTTCGGCAA
TCTTACATTGACTGTTCGGCATATACTTAATTACCACTCGTTTCCGCCCA
CCATCTCTGTTCTCCTCCCTTTTGTCCCTCAAGGATCGGATCTGGAGCAC
TTCCGTGCAGAAGCTGCCACCGGTAAGTAGGAAAAAGAAATAAAAATGCA
TAGGAATGCATGTCTGCACTTTGGGGATTATGCGAGAAAACAGTGGCAGG
TGCTTTGGTGGACGGTAGAAAGCACAGAAGAAAGGAAATAGGGAGAAAGA
AGAGATCTCATCTTACAATTTCATTATTATTTTCCTTTAATTACCCCATG
GCAAAATAAGGGAACGGCCCCCCGACCTCATCGCGATGGAATCCTTTTCG
GCACCCAAACGGAGCCCTACTACGACAAAGGTAGATAGCTCTTCTTCAAG
TCTACTCTCGCTAGATCTCATCACTGTCTCTATTCCTCTGATCTTCCCCG
CCTCCAGATACCTTCTACCCTGTCGATTACGCTACTATCGTCGTAGGCAG
CCGGGTACCGTACATGGTCTTCGGCGAGGACAGGTTGGTGGACAGTTTAT
CCCCCCGGTTTCCCCTCCGTCCCTCTCTCCGTCTTTTACATATTCTCCCT
CACACTTTTCTTCAGGTTTCACAAGAGCCAACCTTTCAACCCTTATTTGG
CAAATTACGTCTCAGCGAGTGGCAACTACTTTACAGGGATCTATTCAGAT
TTTATGTAAGGAAGGATGGGGGATAGGAGGAAGAAAAGGTGTGATAGAGA
GAAACAGGGAACCTTATACCGTCTATTATTTTATGTATTATTTTAAAATT
AGCTTTCACTTTTTATTTCCCCCTTATTCAGGTATTTTAACACGTCCCGC
GCCCATTCGCAGCACCTGGTCAAGTACCTAGCCAACATGGCACCTGAATC
TACCTTTGAATTCGCCTTTAAGATTGAGGATGACTTTGCAAATGTCTATG
AGGTAGGAAGGAAAGAAGGGAGATTGCCAGAAAATTACGCAATACAATTG
CAGTACCAAGTCTAATTCCATTTTGCTGTTTTTTTCCCACCCTACAGGCC
CAACGGGTGTTGATTGAGGAGAATGACTGGATGTTCCGCAACCGAGGCTG
CTTACCTCTGAGCATGTTTTCAGGCATACGATGGACTGAAGCCTCTTCGT
GTCCTCTTTCTCACGTCTATGGGAAGCCAGGAGAGAAGATTGCTTTGATG
GAGTGCATTGCTGTGCAAGGCACGGATGGTACGTGTAGCTCTTATTCAAG
TTTACCATGTTCTTCAAAATAATGTAATACGTTGGCGTTTGCTCAGTCTG
CGGAAAACTGTTACCATGTTGTAATTGTTTGAGCTACGAGCGCGATGTAT
GGCATAGTAGGTTTGAATTTCACGCTGTACCTTTTGAGAATGAGTGTGCG
GCTGGGGATCCAATGAGATATTGAAAATTTATTAATACTCATGCTGTATT
TCCTCGCCCATTACTTACAGGATGGGATGAATTCCTTCAGCGTGTGTTTG
CACGCTGGAGTCAAATGCGTAGCAAGAAGGACGGGTCCCTTCCGAAGCCC
CATTGGGCGAAATGGGATAGTCGCTGGGTGCCCGGTCTATTAGATTATAT
CAAAAAGGTGAATATAAATGCAGGAAAAGGAGGCGTAGATGAAAGAGTTG
AAATGAAGAGAGACGCAGTAATGATCTCACACACTCATCTTTCCTCCCTC
CTTGTTTCCGGTTCCCTTTTCATCCCTTCCCAGGTCTACGCTGACCAGAT
CGATATGATTCGGCCGGTGGTGCTCGAGAACGATCCAAACGGTTTGTTCC
GTAACTCATTCTTGAGCGACATGTTTAGACTGCCCGATGGACATTGA

Coding sequence (CDS) from alignment at chr27:118410..123406+

>NO27G00330.1 ID=NO27G00330.1|Name=NO27G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=2190bp|location=Sequence derived from alignment at chr27:118410..123406+ (Nannochloropsis oceanica)
ATGCTTTCCTTGAGTCCTCTTCCCCCTCCAAGAATACCATTCAACAATTC
TTCCATTGCTTGCTCTGGATGTCCTTCCCTACCTTTGTCTTGTGGTGCTC
GCACCTGCAGCAGCAGCAGCAGCAGCAGCTGCACAGGTGCTTATGTAGGC
TGGCAATTTCTAGAGCGGCAGCACTTTAGCAGCAGCGCAGTAGCAGCAGC
AGCAGGAACAGTAGCACAAGATGTGGATGATGGCCTGGGTCGAGAGCTTA
TACTGCCTGTTTATCTCAATATCGACGCCATGCGATACCTTCCCTGGACA
ATAAGACCGAACTTGGCCGTAATCCTCCTTCTACTTTCCTTTTCGACCGC
GCACGGGCAAACAGGCCTCCGGAAGGCCCCAAAGCAAAGTCAGACTGGAC
GGCCCATCGAGGAGGCTACTCCTGCCTCTGCCGTCGTCGATGTCTCCTCC
TCTTCCTCCTCCGCCACAGCAGTAGCAGAAAGCCCCCACATAGCAGAAAT
ACAAGCGACAGATGAAGCGGACAAGTTTGCCTTACCGGGGACTCAGTCCT
TGTCTGAATCCGACCCAGCTATTCTGGGAGGGGACCCGAACAGTCATTTT
ATGATTAATTTCGGACATAACGCCATGGCAAACGGGGTGCGGAAGCACCA
TCCGAAGACGTATGATGAGGTGGCCAGCTTGGTCCGGTCCGTCAAGGCCG
CAGGCGGGCGACTCCGTCCTATGGGGGCTCTGCATTCATGGAGCAATATT
TTCCCTGAGGACGACACTGACGTGCTCTTCCTCGATCAGTTTAAAGGCCT
CTCTCAGGATCCGGAAGACTATGCACGGGTCACTATCCAAGCAGGTGTGC
TGCAAAGTGAGCTAGCAGACTGGGCGGACAGCAAGGAAAGAGGTTATGGT
CGGTTCTCGTACTTGAGCCAAGCGCCGGCGATCACGGGTGTAACGTTTGT
AGGAGCGTGCCAGACGGCTTCACATGGAAGTGGGTTCGTCGGCGAAAGCA
CCCCGGACTCTATCATCGAAGTCACTCTGGTCGACCACGAGGGAAACATC
AAGCACTACTCCGAAGGCGATCCACGCATTAAGGTCCTCGCGGCGTGTCT
AGGCATGTGCGGTATCATTCTGGAGGTGACAGCGCGCTTTAACCCTTCGA
CTGATGCCGTCCAGGTTACGCGTGGTCGTCGTCCGCTTCATGATCTGCTT
CCTCCTCGGTCGGTCGTCATCAACGAGTCCTTTAACCCGCTCAAGGACTT
TATCGAGGGAGAGGGTTATCATGGCGGGGCGCTCTCGTACGCTCCCTATA
ACAGCGCGCCAGAAGTGGGAATCAAGCTGGAAGCTAGCAAGATAGATGAG
TATCAATCTAGGGATCGGATCTGGAGCACTTCCGTGCAGAAGCTGCCACC
GGGAACGGCCCCCCGACCTCATCGCGATGGAATCCTTTTCGGCACCCAAA
CGGAGCCCTACTACGACAAAGATACCTTCTACCCTGTCGATTACGCTACT
ATCGTCGTAGGCAGCCGGGTACCGTACATGGTCTTCGGCGAGGACAGGTT
TCACAAGAGCCAACCTTTCAACCCTTATTTGGCAAATTACGTCTCAGCGA
GTGGCAACTACTTTACAGGGATCTATTCAGATTTTATGTATTTTAACACG
TCCCGCGCCCATTCGCAGCACCTGGTCAAGTACCTAGCCAACATGGCACC
TGAATCTACCTTTGAATTCGCCTTTAAGATTGAGGATGACTTTGCAAATG
TCTATGAGGCCCAACGGGTGTTGATTGAGGAGAATGACTGGATGTTCCGC
AACCGAGGCTGCTTACCTCTGAGCATGTTTTCAGGCATACGATGGACTGA
AGCCTCTTCGTGTCCTCTTTCTCACGTCTATGGGAAGCCAGGAGAGAAGA
TTGCTTTGATGGAGTGCATTGCTGTGCAAGGCACGGATGGATGGGATGAA
TTCCTTCAGCGTGTGTTTGCACGCTGGAGTCAAATGCGTAGCAAGAAGGA
CGGGTCCCTTCCGAAGCCCCATTGGGCGAAATGGGATAGTCGCTGGGTGC
CCGGTCTATTAGATTATATCAAAAAGGTCTACGCTGACCAGATCGATATG
ATTCGGCCGGTGGTGCTCGAGAACGATCCAAACGGTTTGTTCCGTAACTC
ATTCTTGAGCGACATGTTTAGACTGCCCGATGGACATTGA

Synonyms

Publications