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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr26 | genome | chr26:70437..73459 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO26G00210.2 vs.
Match: PSC67348.1 (ATP:cob(I)alamin adenosyltransferase [Micractinium conductrix]) HSP 1 Score: 157.9 bits (398), Expect = 9.700e-35 Identity = 78/129 (60.47%), Postives = 97/129 (75.19%), Query Frame = 0
Query: 192 IYTRTGDKGTSSLYNGERRPKNDATFDALGATDELNAAIGLAKEHAI-TKSALGGPLCQIQSRLLDLGAAIATPAQTSDDHKRERTRFDPTHVKKVEEWIDELDGRLPPLKNFILPSGGLCSAHLHLAR 320
IYTRTGD G SSLY+GERRPK+DA F ALG DE+N+ IGLA+EHA L G L +IQSRL D+G+A+ATP +S +HK +RT F H +++E+WID + G+LPPL FILPSGGL SA LH+AR
Sbjct: 3 IYTRTGDGGASSLYSGERRPKDDAVFAALGDVDEVNSVIGLAREHARQVDPGLAGQLEEIQSRLFDVGSAVATPLPSSSEHKLQRTVFSTRHTQQLEQWIDGMTGQLPPLTQFILPSGGLASASLHMAR 131
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO26G00210.2 ID=NO26G00210.2|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=mRNA|length=2130bp GGGAACACGTCGCCCTACTATTTCTGCCCCATCTGACACACCTGACAGAC GCCTGAAAGACTTGTCGGTGGTCCCGTCCGGCCGAGACTGGGGCTGATCG ACGATTCAGGAAGAGATATGCGCAATGATGTGACGTTAATTATCTATGCG GTGCATGCTGTCTTTGGTCGTGACTGCGGTAGACAGCGAGGAAACGCTCG CTTCAGGCCCCTCCTTGTCTCACTCCTGACACACACCCGTGCTTCTCCAC CTTCAGGCAGTCCACGAACCAAGCGCCCGGAAGGGAAAAAAAGGTGCCGA CCGCGGGGAGATAAACATGCAATGCTGAGCTCGCTGCCTTTCCACACCTT TCGTCCCGTCCGTCGCATCATCACATCGTCGTTCGCCACCAACACCACCA GCAGAGGCAGTAGTAGCGTCTGCAGGCAATTTACCACCCACCTGTCCCGT CGTCCATCCTCGTCTACCACCAGCATGGCACCCTCACTCTTGGCGCTCGC GGCGTCGGCGGGAAATAGCATAACACTGAGTGAATTAACGCTGCACAAGC TGCAAGGAGCACAGCTGTTTGTCGGGAGCGGCGTGGCTTTCCTCTTCGCG GCTCATCGCTGGCAGGAATGGCGACGTGGTCTGTCGACCAGTGCAGGGGA AGGAGCCGCCCGGGACAAGAAGAAGAAGAAGAAGAGTATGATATACACCC GCACGGGAGATAAAGGCACGTCCAGCCTATATAATGGAGAGCGACGGCCA AAAAATGACGCGACCTTCGATGCATTGGGTGCAACGGACGAGCTCAACGC AGCTATTGGCCTCGCGAAGGAGCATGCCATCACCAAGAGCGCCTTGGGAG GGCCGCTGTGTCAGATCCAATCCCGCCTTCTGGACTTGGGGGCTGCCATC GCCACGCCCGCGCAGACGTCGGACGACCACAAACGAGAACGGACGCGCTT CGACCCCACCCACGTCAAGAAGGTGGAGGAGTGGATCGACGAACTCGACG GCCGCCTCCCTCCTCTCAAGAACTTTATCCTCCCCTCTGGAGGGCTCTGC AGTGCGCATCTGCACTTAGCCCGGTACGGAGGGAGGGAGGGAATGGCAGG GAGGGAGAATGGAGGGCGGGAAGGAGATGGAAATGCTCGTGCATGTGTTT CTTCGCAACTCACTTTCTGCCTTGTCAATGTCCCTCCTTCCCTCCTTCCC TGTTCCCTTTCCCTTCTGTGTCCTTCAGCACCATTTGCCGACGGGCTGAA CGAAGCGTCATCCCCCTTGTCAACTCCGAGCAGGTCGATCCTGAGGTACG CTTGTGCCCTCCCTCCTTCGCTTCCTCCTTCCCTCTCTCATTCCTCCCTT CGCCTCCTTTTACTTCGAACGCTGTACCATCCGTGTCTTCTTCTCTCTAT CCATCTACGTGTGCACACACTCTCTCCTTTTCCTTATAATCGCCTATTCC ACCCTCCTAATTACCCATTCCGCCCTCCTCCTAATCACCCCTTCCTCCTC CTTATCACCCATTCCACCCTCGTAATCATCTATTCCATCCTTCTAATAAT CCATTCCACCATCTTAGTCATTCATTCCACCATCCTAATAATCCATCATC CACGTCTCTCCTCGTCGCCTTCTTCCCTTGGTTCATGCCGTCAGCCTTCC CACCCCTCCATGGTCCCATCCCTCTCTCCATCCCCATCCATCCCCTCCTT AGGTGGGCATCTATTTGAACCGCCTGTCGGACTTCTTGTTCGTCGCGGCG CGGTGGGCGGCCAAGAGCGAGGGCCACGAGGAGACCGTGTGGGTGAAGTA AAGAGAATGAATGGGGAGAGGACGGGAGGGAGGGAGGGAGGAAGGGGAGG GAAGCATGCATTTTTCGTTCTCGTCTTTCTCTCTCTGATTCTCTCCATCT CGCTTATTTAATTTCTTCCCTCTCGTCTTTTTCATCTTTCGGCGAGAAGG AAGGAGGAGTGGCAGTGAGAAGGAGGAAAGGCAGACGGGAGGGACGGAGG AAGGGAGGGAGGGAAAATGAACAGCTACGAATTGATCGCTTGGGCGGAAA GGAGACGATGCGAGGGAGAAGAATACAAATACCACAAGAAAAAAAGAATA GGAGACAGCGAAGGGAAAAACAAACGTGCG back to topprotein sequence of NO26G00210.2 >NO26G00210.2-protein ID=NO26G00210.2-protein|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=polypeptide|length=598bp MRNDVTLIIYAVHAVFGRDCGRQRGNARFRPLLVSLLTHTRASPPSGSPR TKRPEGKKRCRPRGDKHAMLSSLPFHTFRPVRRIITSSFATNTTSRGSSS VCRQFTTHLSRRPSSSTTSMAPSLLALAASAGNSITLSELTLHKLQGAQL FVGSGVAFLFAAHRWQEWRRGLSTSAGEGAARDKKKKKKSMIYTRTGDKG TSSLYNGERRPKNDATFDALGATDELNAAIGLAKEHAITKSALGGPLCQI QSRLLDLGAAIATPAQTSDDHKRERTRFDPTHVKKVEEWIDELDGRLPPL KNFILPSGGLCSAHLHLARYGGREGMAGRENGGREGDGNARACVSSQLTF CLVNVPPSLLPCSLSLLCPSAPFADGLNEASSPLSTPSRSILRYACALPP SLPPSLSHSSLRLLLLRTLYHPCLLLSIHLRVHTLSPFPYNRLFHPPNYP FRPPPNHPFLLLITHSTLVIIYSILLIIHSTILVIHSTILIIHHPRLSSS PSSLGSCRQPSHPSMVPSLSPSPSIPSLGGHLFEPPVGLLVRRGAVGGQE RGPRGDRVGEVKRMNGERTGGREGGRGGKHAFFVLVFLSLILSISLI* back to topmRNA from alignment at chr26:70437..73459- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO26G00210.2 ID=NO26G00210.2|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=mRNA|length=3023bp|location=Sequence derived from alignment at chr26:70437..73459- (Nannochloropsis oceanica) GGGAACACGTCGCCCTACTATTTCTGCCCCATCTGACACACCTGACAGAC
GCCTGAAAGACTTGTCGGTGGTCCCGTCCGGCCGAGACTGGGGCTGATCG
ACGATTCAGGAAGAGATATGCGCAATGATGTGACGTTAATTATCTATGCG
GTGCATGCTGTCTTTGGTCGTGACTGCGGTAGACAGCGAGGAAACGCTCG
CTTCAGGCCCCTCCTTGTCTCACTCCTGACACACACCCGTGCTTCTCCAC
CTTCAGGCAGTCCACGAACCAAGCGCCCGGAAGGGAAAAAAAGGTGCCGA
CCGCGGGGAGATAAACATGCAATGCTGAGCTCGCTGCCTTTCCACACCTT
TCGTCCCGTCCGTCGCATCATCACATCGTCGTTCGCCACCAACACCACCA
GCAGAGGCAGTAGTAGCGTCTGCAGGCAATTTACCACCCACCTGTCCCGT
CGTCCATCCTCGTCTACCACCAGCATGGCACCCTCACTCTTGGCGCTCGC
GGCGTCGGCGGGAAATAGCATAACACTGAGTGAATTAACGCTGCACAAGC
TGCAAGGAGCACAGCTGTTTGTCGGGAGCGGCGTGGCTTTCCTCTTCGCG
GCTCATCGCTGGCAGGTACGGATGGAAGGTAAAAATGTGGAGGAAGCCTG
GAGAGGGATGCTTCAGTCATATGTTCGAACCAAAGGTTGATGCGTGGACA
CCTTCGATCAGGAATGGCGACGTGGTCTGTCGACCAGTGCAGGGGAAGGA
GCCGCCCGGGACAAGAAGAAGAAGAAGAAGAGTATGATATACACCCGCAC
GGGAGATAAAGGCACGTCCAGCCTATATAATGGAGAGGTAAGGCCGAAAC
GAAGGAAGGCTAGAGCAATGGAGGAAGGGAGAACGAGAAATAAGGGTGGA
CACACGATGTTGACACTTCCATGTTGTCTTACTCCTTCACTTCTCCCTCC
CCTCCCACCCTCCCCTCCCTCCTCTCCCTCCTCTCACTTCCTCCACTCCA
TTCCACCATAGCGACGGCCAAAAAATGACGCGACCTTCGATGCATTGGGT
GCAACGGACGAGCTCAACGCAGCTATTGGCCTCGCGAAGGAGCATGCCAT
GTAAGGAGAGGGGGAGGGAGGGAGGAAGGGAAAGAGTGAGGGAGGGTGGG
AGGGAGGGTGGGAGGGAGAGAGGGAGGGCGAGCAGGTGTGCAGGAGTAGA
CGAGCCTTATAGGAGAGTAGTAGTACACGGCTTGGTGCGCATCAAAGCCA
GCCTTGACTGTACAATGTCGTTTACTCACTCCATTGACTGACTCGACGCA
ACACACAGCACCAAGAGCGCCTTGGGAGGGCCGCTGTGTCAGATCCAATC
CCGCCTTCTGGACTTGGGGGCTGCCATCGCCACGCCCGCGCAGGTGGGAA
GGAGGGAGGGAGGGAGGGAGGGAGGGTGTGGTGTAACTTGAATTTCCGAT
TTTTCACGGCCTGCATCTGTCTTCCGGGTCTGTTGCTTTTCCCGCTCCCT
CTCTACTCCTTCCTTTCCTCTTCCCACTGACGGCCAGTCTATTTCTCCAA
TTCCTATTTGTGTCTATTTCTTTTCCCGCCCCCTCCCCCTCCCTACTACT
GCTCACCCTTTTAAACTTTCGTCCTTCCCTTCGGACAGACGTCGGACGAC
CACAAACGAGAACGGACGCGCTTCGACCCCACCCACGTCAAGAAGGTAAG
TTGATTTAGATTATCAAGCAGGGAAATTTGATTCGGATTCTCAAGAATAT
TGGTTGGTTTGGCTTCCCCTTCATTTTCTGGCTCCTCTACTACGGCCCTT
CATCACCGTCCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTACCTCCCTC
CCTCCCCCCGATCAGGTGGAGGAGTGGATCGACGAACTCGACGGCCGCCT
CCCTCCTCTCAAGAACTTTATCCTCCCCTCTGGAGGGCTCTGCAGTGCGC
ATCTGCACTTAGCCCGGTACGGAGGGAGGGAGGGAATGGCAGGGAGGGAG
AATGGAGGGCGGGAAGGAGATGGAAATGCTCGTGCATGTGTTTCTTCGCA
ACTCACTTTCTGCCTTGTCAATGTCCCTCCTTCCCTCCTTCCCTGTTCCC
TTTCCCTTCTGTGTCCTTCAGCACCATTTGCCGACGGGCTGAACGAAGCG
TCATCCCCCTTGTCAACTCCGAGCAGGTCGATCCTGAGGTACGCTTGTGC
CCTCCCTCCTTCGCTTCCTCCTTCCCTCTCTCATTCCTCCCTTCGCCTCC
TTTTACTTCGAACGCTGTACCATCCGTGTCTTCTTCTCTCTATCCATCTA
CGTGTGCACACACTCTCTCCTTTTCCTTATAATCGCCTATTCCACCCTCC
TAATTACCCATTCCGCCCTCCTCCTAATCACCCCTTCCTCCTCCTTATCA
CCCATTCCACCCTCGTAATCATCTATTCCATCCTTCTAATAATCCATTCC
ACCATCTTAGTCATTCATTCCACCATCCTAATAATCCATCATCCACGTCT
CTCCTCGTCGCCTTCTTCCCTTGGTTCATGCCGTCAGCCTTCCCACCCCT
CCATGGTCCCATCCCTCTCTCCATCCCCATCCATCCCCTCCTTAGGTGGG
CATCTATTTGAACCGCCTGTCGGACTTCTTGTTCGTCGCGGCGCGGTGGG
CGGCCAAGAGCGAGGGCCACGAGGAGACCGTGTGGGTGAAGTAAAGAGAA
TGAATGGGGAGAGGACGGGAGGGAGGGAGGGAGGAAGGGGAGGGAAGCAT
GCATTTTTCGTTCTCGTCTTTCTCTCTCTGATTCTCTCCATCTCGCTTAT
TTAATTTCTTCCCTCTCGTCTTTTTCATCTTTCGGCGAGAAGGAAGGAGG
AGTGGCAGTGAGAAGGAGGAAAGGCAGACGGGAGGGACGGAGGAAGGGAG
GGAGGGAAAATGAACAGCTACGAATTGATCGCTTGGGCGGAAAGGAGACG
ATGCGAGGGAGAAGAATACAAATACCACAAGAAAAAAAGAATAGGAGACA
GCGAAGGGAAAAACAAACGTGCG back to topCoding sequence (CDS) from alignment at chr26:70437..73459- >NO26G00210.2 ID=NO26G00210.2|Name=NO26G00210.2|organism=Nannochloropsis oceanica|type=CDS|length=1794bp|location=Sequence derived from alignment at chr26:70437..73459- (Nannochloropsis oceanica) ATGCGCAATGATGTGACGTTAATTATCTATGCGGTGCATGCTGTCTTTGG TCGTGACTGCGGTAGACAGCGAGGAAACGCTCGCTTCAGGCCCCTCCTTG TCTCACTCCTGACACACACCCGTGCTTCTCCACCTTCAGGCAGTCCACGA ACCAAGCGCCCGGAAGGGAAAAAAAGGTGCCGACCGCGGGGAGATAAACA TGCAATGCTGAGCTCGCTGCCTTTCCACACCTTTCGTCCCGTCCGTCGCA TCATCACATCGTCGTTCGCCACCAACACCACCAGCAGAGGCAGTAGTAGC GTCTGCAGGCAATTTACCACCCACCTGTCCCGTCGTCCATCCTCGTCTAC CACCAGCATGGCACCCTCACTCTTGGCGCTCGCGGCGTCGGCGGGAAATA GCATAACACTGAGTGAATTAACGCTGCACAAGCTGCAAGGAGCACAGCTG TTTGTCGGGAGCGGCGTGGCTTTCCTCTTCGCGGCTCATCGCTGGCAGGA ATGGCGACGTGGTCTGTCGACCAGTGCAGGGGAAGGAGCCGCCCGGGACA AGAAGAAGAAGAAGAAGAGTATGATATACACCCGCACGGGAGATAAAGGC ACGTCCAGCCTATATAATGGAGAGCGACGGCCAAAAAATGACGCGACCTT CGATGCATTGGGTGCAACGGACGAGCTCAACGCAGCTATTGGCCTCGCGA AGGAGCATGCCATCACCAAGAGCGCCTTGGGAGGGCCGCTGTGTCAGATC CAATCCCGCCTTCTGGACTTGGGGGCTGCCATCGCCACGCCCGCGCAGAC GTCGGACGACCACAAACGAGAACGGACGCGCTTCGACCCCACCCACGTCA AGAAGGTGGAGGAGTGGATCGACGAACTCGACGGCCGCCTCCCTCCTCTC AAGAACTTTATCCTCCCCTCTGGAGGGCTCTGCAGTGCGCATCTGCACTT AGCCCGGTACGGAGGGAGGGAGGGAATGGCAGGGAGGGAGAATGGAGGGC GGGAAGGAGATGGAAATGCTCGTGCATGTGTTTCTTCGCAACTCACTTTC TGCCTTGTCAATGTCCCTCCTTCCCTCCTTCCCTGTTCCCTTTCCCTTCT GTGTCCTTCAGCACCATTTGCCGACGGGCTGAACGAAGCGTCATCCCCCT TGTCAACTCCGAGCAGGTCGATCCTGAGGTACGCTTGTGCCCTCCCTCCT TCGCTTCCTCCTTCCCTCTCTCATTCCTCCCTTCGCCTCCTTTTACTTCG AACGCTGTACCATCCGTGTCTTCTTCTCTCTATCCATCTACGTGTGCACA CACTCTCTCCTTTTCCTTATAATCGCCTATTCCACCCTCCTAATTACCCA TTCCGCCCTCCTCCTAATCACCCCTTCCTCCTCCTTATCACCCATTCCAC CCTCGTAATCATCTATTCCATCCTTCTAATAATCCATTCCACCATCTTAG TCATTCATTCCACCATCCTAATAATCCATCATCCACGTCTCTCCTCGTCG CCTTCTTCCCTTGGTTCATGCCGTCAGCCTTCCCACCCCTCCATGGTCCC ATCCCTCTCTCCATCCCCATCCATCCCCTCCTTAGGTGGGCATCTATTTG AACCGCCTGTCGGACTTCTTGTTCGTCGCGGCGCGGTGGGCGGCCAAGAG CGAGGGCCACGAGGAGACCGTGTGGGTGAAGTAAAGAGAATGAATGGGGA GAGGACGGGAGGGAGGGAGGGAGGAAGGGGAGGGAAGCATGCATTTTTCG TTCTCGTCTTTCTCTCTCTGATTCTCTCCATCTCGCTTATTTAA back to top
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