NO25G00390.1, NO25G00390.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO25G00390.1
Unique NameNO25G00390.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1554
Alignment locationchr25:120127..121793 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr25genomechr25:120127..121793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO25G00390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO25G00390NO25G00390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO25G00390.1NO25G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO25G00390.1.cds1NO25G00390.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO25G00390.1.cds2NO25G00390.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO25G00390.1 ID=NO25G00390.1|Name=NO25G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=1554bp
ACAACGGGAGAAAATGCAATACGAGACGCAAAAATTTTGGGAGAGGCTGT
GGATGCCGCCAAGACGTGTCAATACTGCTGCCGCTGGGCATGCTGCTTGA
GATTGTCTGTACCTAGGTGTAGGTAATGCTTTCTATGCTCTCGAGGGAAG
TATTACATTACAGTCTTCGAGGTTTGATGCGATGATGGCGAGTTTATGTT
GACGAACGGAGATCCGATCGCAATTCTTACACTGCGCACACTTTGTAGTG
CACACACAGACACACATCCACACATAGGATGGGTAAGAATAAACGCGGCA
GTGGCAGCAGCCGTAAACCTTCCGGCAGCTCCGGTGTGGGTGGGGCTGGA
AGCTTCGCCCTGGGACTTGCCCTCGGTGCAAAACCAGCCATCAAAAAGAC
CCACGCTATGTCTATGCTGGCGACTGACCAGCCGGCTGAAAGCAACTCTG
CCGCCCGCAAACGACTGCGTGCGGCTCGTCCTGCGCCTCCCACATCGTTT
CGAGCGAGTAAAGATCCTCTTTTGGAGTCCAGCAGCGCCCGCGTGACGAA
GAAGCAGCGGTCTGCCAACCCCGACTATGATGATGCCTACCGTAATCTCC
TGGAGCGCACTGAGGGACAAGCGCGGAGCCAGGCCTTCCACCGGCAAGAG
GCCCGAAAGCGAAGAGCTCAAGGCAAGACGCGGAATGGACTCATTGCTCC
TCCGATATTTGTGGACATGGGGGTCAGCCCATCGATTGCGGCAGCGGTGT
CAGCAGGAGCAACCTTATCAAGCGTCGGGGAGTTTGTGGGTAGCCTCTGC
GCGGGGTTGGAAAAAGAGCAGCGGGAGGAAGAGGACGAGAAGGGGCAGGT
GAAGAAGGAAGGTCGAAGGAGAAGAAATGGACCAGGGGGCAAGCATGGCA
TGGGCGATGAGGAGGTAGTAGCGAGAGGTCCCAAGAAGCACAACCCCTTT
GCGTCCTTGGGGTCATGTGACGAGGATGACGAGGATGAGCAGGAGGGAAA
TTCGCCCGGCGTGGTTTTCCAGCCCTCTGTGCTGCAACCGTCCTGTGTGC
TCTCATCTCAGTCGCAGCCTTTGGACCAGGATACGACTGGATCACTGGGG
GAAGCCCCGCCGAAGCCGGGTGGAGAAACTGGAGATAAAGCCTCTTGGAG
GGGTCAAAATATTGAAAACGATTGGAGTTCCCTCAGTATGGAGGCGCTGT
CCTCGTCGCTCTTGGACGTAGGGACTTTGCCAATGAAACCCCTGTCAATT
TCCCCTGTTGATAACCACGAGAGAAAGAGAGAAAATAACGATTTGTTTAC
CTCCGCGACGTCAGAAGCACAGCCGCCACTCCCCATTTTCGTCCATTCCC
CAGTGACAGCATCAAAGGATAACGTGGAACGGGAAGGCACGAATGTCTTG
CCAGTAATAAGCGAAGGAGGTAATGGCGAAGGACATCAAGTCAGCACGCA
TGTCACAATAGAGGATTTTCACGACTTGTGAAGTAATGTAAATAGAGTTC
TCATCAAGTAGACCAAACAAAATATGGTTAGTGAATATCGAGAAGATGCA
ACAA
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protein sequence of NO25G00390.1

>NO25G00390.1-protein ID=NO25G00390.1-protein|Name=NO25G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=401bp
MGKNKRGSGSSRKPSGSSGVGGAGSFALGLALGAKPAIKKTHAMSMLATD
QPAESNSAARKRLRAARPAPPTSFRASKDPLLESSSARVTKKQRSANPDY
DDAYRNLLERTEGQARSQAFHRQEARKRRAQGKTRNGLIAPPIFVDMGVS
PSIAAAVSAGATLSSVGEFVGSLCAGLEKEQREEEDEKGQVKKEGRRRRN
GPGGKHGMGDEEVVARGPKKHNPFASLGSCDEDDEDEQEGNSPGVVFQPS
VLQPSCVLSSQSQPLDQDTTGSLGEAPPKPGGETGDKASWRGQNIENDWS
SLSMEALSSSLLDVGTLPMKPLSISPVDNHERKRENNDLFTSATSEAQPP
LPIFVHSPVTASKDNVEREGTNVLPVISEGGNGEGHQVSTHVTIEDFHDL
*
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mRNA from alignment at chr25:120127..121793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO25G00390.1 ID=NO25G00390.1|Name=NO25G00390.1|organism=Nannochloropsis oceanica|type=mRNA|length=1667bp|location=Sequence derived from alignment at chr25:120127..121793- (Nannochloropsis oceanica)
ACAACGGGAGAAAATGCAATACGAGACGCAAAAATTTTGGGAGAGGCTGT
GGATGCCGCCAAGACGTGTCAATACTGCTGCCGCTGGGCATGCTGCTTGA
GATTGTCTGTACCTAGGTGTAGGTAATGCTTTCTATGCTCTCGAGGGAAG
TATTACATTACAGTCTTCGAGGTTTGATGCGATGATGGCGAGTTTATGTT
GACGAACGGAGATCCGATCGCAATTCTTACACTGCGCACACTTTGTAGTG
CACACACAGACACACATCCACACATAGGATGGGTAAGAATAAACGCGGCA
GTGGCAGCAGCCGTAAACCTTCCGGCAGCTCCGGTGTGGGTGGGGCTGGA
AGCTTCGGTAAGTGATTGAGGGCTGCTTGCCCGGTTGTCCGGTGTACCCC
GCATGGTTACGTATTTTCCTCCAGATATTGACCCCGCCTACCCCTCTACA
AACCCTACACGCACACACAGCCCTGGGACTTGCCCTCGGTGCAAAACCAG
CCATCAAAAAGACCCACGCTATGTCTATGCTGGCGACTGACCAGCCGGCT
GAAAGCAACTCTGCCGCCCGCAAACGACTGCGTGCGGCTCGTCCTGCGCC
TCCCACATCGTTTCGAGCGAGTAAAGATCCTCTTTTGGAGTCCAGCAGCG
CCCGCGTGACGAAGAAGCAGCGGTCTGCCAACCCCGACTATGATGATGCC
TACCGTAATCTCCTGGAGCGCACTGAGGGACAAGCGCGGAGCCAGGCCTT
CCACCGGCAAGAGGCCCGAAAGCGAAGAGCTCAAGGCAAGACGCGGAATG
GACTCATTGCTCCTCCGATATTTGTGGACATGGGGGTCAGCCCATCGATT
GCGGCAGCGGTGTCAGCAGGAGCAACCTTATCAAGCGTCGGGGAGTTTGT
GGGTAGCCTCTGCGCGGGGTTGGAAAAAGAGCAGCGGGAGGAAGAGGACG
AGAAGGGGCAGGTGAAGAAGGAAGGTCGAAGGAGAAGAAATGGACCAGGG
GGCAAGCATGGCATGGGCGATGAGGAGGTAGTAGCGAGAGGTCCCAAGAA
GCACAACCCCTTTGCGTCCTTGGGGTCATGTGACGAGGATGACGAGGATG
AGCAGGAGGGAAATTCGCCCGGCGTGGTTTTCCAGCCCTCTGTGCTGCAA
CCGTCCTGTGTGCTCTCATCTCAGTCGCAGCCTTTGGACCAGGATACGAC
TGGATCACTGGGGGAAGCCCCGCCGAAGCCGGGTGGAGAAACTGGAGATA
AAGCCTCTTGGAGGGGTCAAAATATTGAAAACGATTGGAGTTCCCTCAGT
ATGGAGGCGCTGTCCTCGTCGCTCTTGGACGTAGGGACTTTGCCAATGAA
ACCCCTGTCAATTTCCCCTGTTGATAACCACGAGAGAAAGAGAGAAAATA
ACGATTTGTTTACCTCCGCGACGTCAGAAGCACAGCCGCCACTCCCCATT
TTCGTCCATTCCCCAGTGACAGCATCAAAGGATAACGTGGAACGGGAAGG
CACGAATGTCTTGCCAGTAATAAGCGAAGGAGGTAATGGCGAAGGACATC
AAGTCAGCACGCATGTCACAATAGAGGATTTTCACGACTTGTGAAGTAAT
GTAAATAGAGTTCTCATCAAGTAGACCAAACAAAATATGGTTAGTGAATA
TCGAGAAGATGCAACAA
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Coding sequence (CDS) from alignment at chr25:120127..121793-

>NO25G00390.1 ID=NO25G00390.1|Name=NO25G00390.1|organism=Nannochloropsis oceanica|type=CDS|length=1203bp|location=Sequence derived from alignment at chr25:120127..121793- (Nannochloropsis oceanica)
ATGGGTAAGAATAAACGCGGCAGTGGCAGCAGCCGTAAACCTTCCGGCAG
CTCCGGTGTGGGTGGGGCTGGAAGCTTCGCCCTGGGACTTGCCCTCGGTG
CAAAACCAGCCATCAAAAAGACCCACGCTATGTCTATGCTGGCGACTGAC
CAGCCGGCTGAAAGCAACTCTGCCGCCCGCAAACGACTGCGTGCGGCTCG
TCCTGCGCCTCCCACATCGTTTCGAGCGAGTAAAGATCCTCTTTTGGAGT
CCAGCAGCGCCCGCGTGACGAAGAAGCAGCGGTCTGCCAACCCCGACTAT
GATGATGCCTACCGTAATCTCCTGGAGCGCACTGAGGGACAAGCGCGGAG
CCAGGCCTTCCACCGGCAAGAGGCCCGAAAGCGAAGAGCTCAAGGCAAGA
CGCGGAATGGACTCATTGCTCCTCCGATATTTGTGGACATGGGGGTCAGC
CCATCGATTGCGGCAGCGGTGTCAGCAGGAGCAACCTTATCAAGCGTCGG
GGAGTTTGTGGGTAGCCTCTGCGCGGGGTTGGAAAAAGAGCAGCGGGAGG
AAGAGGACGAGAAGGGGCAGGTGAAGAAGGAAGGTCGAAGGAGAAGAAAT
GGACCAGGGGGCAAGCATGGCATGGGCGATGAGGAGGTAGTAGCGAGAGG
TCCCAAGAAGCACAACCCCTTTGCGTCCTTGGGGTCATGTGACGAGGATG
ACGAGGATGAGCAGGAGGGAAATTCGCCCGGCGTGGTTTTCCAGCCCTCT
GTGCTGCAACCGTCCTGTGTGCTCTCATCTCAGTCGCAGCCTTTGGACCA
GGATACGACTGGATCACTGGGGGAAGCCCCGCCGAAGCCGGGTGGAGAAA
CTGGAGATAAAGCCTCTTGGAGGGGTCAAAATATTGAAAACGATTGGAGT
TCCCTCAGTATGGAGGCGCTGTCCTCGTCGCTCTTGGACGTAGGGACTTT
GCCAATGAAACCCCTGTCAATTTCCCCTGTTGATAACCACGAGAGAAAGA
GAGAAAATAACGATTTGTTTACCTCCGCGACGTCAGAAGCACAGCCGCCA
CTCCCCATTTTCGTCCATTCCCCAGTGACAGCATCAAAGGATAACGTGGA
ACGGGAAGGCACGAATGTCTTGCCAGTAATAAGCGAAGGAGGTAATGGCG
AAGGACATCAAGTCAGCACGCATGTCACAATAGAGGATTTTCACGACTTG
TGA
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Synonyms
Publications