NO23G01100.1, NO23G01100.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO23G01100.1
Unique NameNO23G01100.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1596
Alignment locationchr23:403002..404597 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:403002..404597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO23G01100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01100NO23G01100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO23G01100.1NO23G01100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO23G01100.1.cds1NO23G01100.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO23G01100.1 ID=NO23G01100.1|Name=NO23G01100.1|organism=Nannochloropsis oceanica|type=mRNA|length=1596bp
ATGAATTCCCCAGAACGCTGCCGTCGTCGCCTCTTCTCCTCAATACTCCT
ACTTTTTCTTGAGCTCATATTTCCCAAACCCACAACGAGCTTCCTCCCTG
CTCCGCTGCACAGCCGCAACAGTTGCAGCACTCTTTATCAAAGCGTTTCC
CCCAATCAACAAAACGACCGCTCCGAAGCAAGCGCGCCAACATCCTTGTG
GCAGCGCCTTTTCCAATCCACACCCAGGCGTTCGAGGGAATATGAAGAAG
AGCTTGAAGCAGTTGCAACCCAGGTAAAATACCTGGAGCAGCAGCACCGA
TCAGAGTTGGCTAGTTTTCGACAGAAACTGGAAGAGCAGTGGCAGGAACA
GCAATCCAATAAGTGGAAGGCGTTACCCTACGCGGGCACGTGGACAGTGG
AATTGACAGGAGGGAATTACGTGCATTGCACCCCAATCTTCAACCTGGGA
GGCCTCTGGTTTCGCTTAGTGCTGACTGAGAAGATAGCACAAAATTGCAA
AGGCCCTATTCGAGGGAAATATTCGCCAAGGGTGGAAGCAAGGGAGGGCG
AGGGCGGGCGACCTGTTGGGGTATTCGTTGAGTATTTGCCATCATCCAGC
ACCGGAGAAGGAGGAGCAGCAGCAACAGCAGTGCCTTGCTTGCGGTGTCG
CTTCGAGCTGCTCAATGACTTGAAGGAAAATTGTCAGATTGAGAAGGAGG
AAGGGGAGTTGGCGGAGTGTGAGTCAGAGCCTACATTTCTGAATGCCGCC
GGAGGAGCTTTAGGTGTCCCTCACTTCACGGACGTCTGCGACCACCCTCC
TCCTCCCCTTCCTCTTCCTCTTTCTCGCTTTCAACAGCTACAACAGCCAG
AAGGACAAGAGCAGCAGCCATCAAAAGTACTTGTCGGATTTGAGATTTCT
CTATGCGCCGTAAAGTTTTTAAGTGTTACTGAACAAGCGCAAGCTATGAG
GGAGGCATGGGTGAGGACGGAGGCAGCAGTGGAGGAACAGGTGAGAGCCG
TTCTGGTGAAGGAGGAGGAAAGCAGGGTTACCGCGGAGTTGCATGTGAGA
GAAGCCGGAGAATGGAGGGAAAGGGTGGACATGAGGTTCTTTGACGAAGG
AGGGAGCGGTAGAAGAGGCGGTGGAAAGAGTGGTGAGGAGGAGAAACTTT
TTGTGGAGGATGACAGCGATGAAGAAAGCGACGATGACGATGAGAACAGG
AAGTAGAAAAAGGATGCAAACGATGAGAAAGAGAAGCGTGAAGAGAAGGA
AGGATTACGGACAGGCGCGTGTAATGACGATAAGCGTCATCGTGAGAATA
CGGTTGGCAGGGAGGCAGAGGGAGAAGAGGAGGTGAAACACACGAACAAG
GGCGAGGAGGAGGACGACGAGGACGAGGACGGGATAGAAGAATAATATTA
ATGGATATTAATGAATAGACAAGAAAATCGAAGGTGACGAGGACGTGAAT
AAACAATAGGAAAAGATGAAGGGAGCGTGATAAGTGATAGACCAATAGTG
CGAAAAATTAAAGACCCCGCTTCAGACAAGAGAAGAAAACAAGTAGGACA
TCGAAGGAGGGAAATGAAGTAGCCGAGGAAAGTAATGCAAGGAATA
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protein sequence of NO23G01100.1

>NO23G01100.1-protein ID=NO23G01100.1-protein|Name=NO23G01100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MNSPERCRRRLFSSILLLFLELIFPKPTTSFLPAPLHSRNSCSTLYQSVS
PNQQNDRSEASAPTSLWQRLFQSTPRRSREYEEELEAVATQVKYLEQQHR
SELASFRQKLEEQWQEQQSNKWKALPYAGTWTVELTGGNYVHCTPIFNLG
GLWFRLVLTEKIAQNCKGPIRGKYSPRVEAREGEGGRPVGVFVEYLPSSS
TGEGGAAATAVPCLRCRFELLNDLKENCQIEKEEGELAECESEPTFLNAA
GGALGVPHFTDVCDHPPPPLPLPLSRFQQLQQPEGQEQQPSKVLVGFEIS
LCAVKFLSVTEQAQAMREAWVRTEAAVEEQVRAVLVKEEESRVTAELHVR
EAGEWRERVDMRFFDEGGSGRRGGGKSGEEEKLFVEDDSDEESDDDDENR
K*
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mRNA from alignment at chr23:403002..404597-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO23G01100.1 ID=NO23G01100.1|Name=NO23G01100.1|organism=Nannochloropsis oceanica|type=mRNA|length=1596bp|location=Sequence derived from alignment at chr23:403002..404597- (Nannochloropsis oceanica)
ATGAATTCCCCAGAACGCTGCCGTCGTCGCCTCTTCTCCTCAATACTCCT
ACTTTTTCTTGAGCTCATATTTCCCAAACCCACAACGAGCTTCCTCCCTG
CTCCGCTGCACAGCCGCAACAGTTGCAGCACTCTTTATCAAAGCGTTTCC
CCCAATCAACAAAACGACCGCTCCGAAGCAAGCGCGCCAACATCCTTGTG
GCAGCGCCTTTTCCAATCCACACCCAGGCGTTCGAGGGAATATGAAGAAG
AGCTTGAAGCAGTTGCAACCCAGGTAAAATACCTGGAGCAGCAGCACCGA
TCAGAGTTGGCTAGTTTTCGACAGAAACTGGAAGAGCAGTGGCAGGAACA
GCAATCCAATAAGTGGAAGGCGTTACCCTACGCGGGCACGTGGACAGTGG
AATTGACAGGAGGGAATTACGTGCATTGCACCCCAATCTTCAACCTGGGA
GGCCTCTGGTTTCGCTTAGTGCTGACTGAGAAGATAGCACAAAATTGCAA
AGGCCCTATTCGAGGGAAATATTCGCCAAGGGTGGAAGCAAGGGAGGGCG
AGGGCGGGCGACCTGTTGGGGTATTCGTTGAGTATTTGCCATCATCCAGC
ACCGGAGAAGGAGGAGCAGCAGCAACAGCAGTGCCTTGCTTGCGGTGTCG
CTTCGAGCTGCTCAATGACTTGAAGGAAAATTGTCAGATTGAGAAGGAGG
AAGGGGAGTTGGCGGAGTGTGAGTCAGAGCCTACATTTCTGAATGCCGCC
GGAGGAGCTTTAGGTGTCCCTCACTTCACGGACGTCTGCGACCACCCTCC
TCCTCCCCTTCCTCTTCCTCTTTCTCGCTTTCAACAGCTACAACAGCCAG
AAGGACAAGAGCAGCAGCCATCAAAAGTACTTGTCGGATTTGAGATTTCT
CTATGCGCCGTAAAGTTTTTAAGTGTTACTGAACAAGCGCAAGCTATGAG
GGAGGCATGGGTGAGGACGGAGGCAGCAGTGGAGGAACAGGTGAGAGCCG
TTCTGGTGAAGGAGGAGGAAAGCAGGGTTACCGCGGAGTTGCATGTGAGA
GAAGCCGGAGAATGGAGGGAAAGGGTGGACATGAGGTTCTTTGACGAAGG
AGGGAGCGGTAGAAGAGGCGGTGGAAAGAGTGGTGAGGAGGAGAAACTTT
TTGTGGAGGATGACAGCGATGAAGAAAGCGACGATGACGATGAGAACAGG
AAGTAGAAAAAGGATGCAAACGATGAGAAAGAGAAGCGTGAAGAGAAGGA
AGGATTACGGACAGGCGCGTGTAATGACGATAAGCGTCATCGTGAGAATA
CGGTTGGCAGGGAGGCAGAGGGAGAAGAGGAGGTGAAACACACGAACAAG
GGCGAGGAGGAGGACGACGAGGACGAGGACGGGATAGAAGAATAATATTA
ATGGATATTAATGAATAGACAAGAAAATCGAAGGTGACGAGGACGTGAAT
AAACAATAGGAAAAGATGAAGGGAGCGTGATAAGTGATAGACCAATAGTG
CGAAAAATTAAAGACCCCGCTTCAGACAAGAGAAGAAAACAAGTAGGACA
TCGAAGGAGGGAAATGAAGTAGCCGAGGAAAGTAATGCAAGGAATA
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Coding sequence (CDS) from alignment at chr23:403002..404597-

>NO23G01100.1 ID=NO23G01100.1|Name=NO23G01100.1|organism=Nannochloropsis oceanica|type=CDS|length=1206bp|location=Sequence derived from alignment at chr23:403002..404597- (Nannochloropsis oceanica)
ATGAATTCCCCAGAACGCTGCCGTCGTCGCCTCTTCTCCTCAATACTCCT
ACTTTTTCTTGAGCTCATATTTCCCAAACCCACAACGAGCTTCCTCCCTG
CTCCGCTGCACAGCCGCAACAGTTGCAGCACTCTTTATCAAAGCGTTTCC
CCCAATCAACAAAACGACCGCTCCGAAGCAAGCGCGCCAACATCCTTGTG
GCAGCGCCTTTTCCAATCCACACCCAGGCGTTCGAGGGAATATGAAGAAG
AGCTTGAAGCAGTTGCAACCCAGGTAAAATACCTGGAGCAGCAGCACCGA
TCAGAGTTGGCTAGTTTTCGACAGAAACTGGAAGAGCAGTGGCAGGAACA
GCAATCCAATAAGTGGAAGGCGTTACCCTACGCGGGCACGTGGACAGTGG
AATTGACAGGAGGGAATTACGTGCATTGCACCCCAATCTTCAACCTGGGA
GGCCTCTGGTTTCGCTTAGTGCTGACTGAGAAGATAGCACAAAATTGCAA
AGGCCCTATTCGAGGGAAATATTCGCCAAGGGTGGAAGCAAGGGAGGGCG
AGGGCGGGCGACCTGTTGGGGTATTCGTTGAGTATTTGCCATCATCCAGC
ACCGGAGAAGGAGGAGCAGCAGCAACAGCAGTGCCTTGCTTGCGGTGTCG
CTTCGAGCTGCTCAATGACTTGAAGGAAAATTGTCAGATTGAGAAGGAGG
AAGGGGAGTTGGCGGAGTGTGAGTCAGAGCCTACATTTCTGAATGCCGCC
GGAGGAGCTTTAGGTGTCCCTCACTTCACGGACGTCTGCGACCACCCTCC
TCCTCCCCTTCCTCTTCCTCTTTCTCGCTTTCAACAGCTACAACAGCCAG
AAGGACAAGAGCAGCAGCCATCAAAAGTACTTGTCGGATTTGAGATTTCT
CTATGCGCCGTAAAGTTTTTAAGTGTTACTGAACAAGCGCAAGCTATGAG
GGAGGCATGGGTGAGGACGGAGGCAGCAGTGGAGGAACAGGTGAGAGCCG
TTCTGGTGAAGGAGGAGGAAAGCAGGGTTACCGCGGAGTTGCATGTGAGA
GAAGCCGGAGAATGGAGGGAAAGGGTGGACATGAGGTTCTTTGACGAAGG
AGGGAGCGGTAGAAGAGGCGGTGGAAAGAGTGGTGAGGAGGAGAAACTTT
TTGTGGAGGATGACAGCGATGAAGAAAGCGACGATGACGATGAGAACAGG
AAGTAG
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Synonyms
Publications