NO22G00100.1, NO22G00100.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G00100.1
Unique NameNO22G00100.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length594
Alignment locationchr22:42048..42889 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:42048..42889 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00100NO22G00100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G00100.1NO22G00100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G00100.1.cds1NO22G00100.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G00100.1.cds2NO22G00100.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G00100.1.cds3NO22G00100.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G00100.1 ID=NO22G00100.1|Name=NO22G00100.1|organism=Nannochloropsis oceanica|type=mRNA|length=594bp
ATGCAAAATGCAAAATGTTACAACGTCGGATCCCTCTCACTAGCTTTCTT
TCTCCTCTTCCGCCTCCTCCTAATGCTGTTGATCGAATTATTGCAACTGC
TGAAAGTGCTCGTGCTGCTGCTCTTCGTGGGAAAGATGGAGGGCTTTCTC
TGTCTCCCCCTCCCCCTCCTGTTGCTGCTTCTGCCGCTCCTACTCCTCCC
ACTCTTACTCTTCCTCGACCCTTTCCGGTTTTGGTCCTGTCTCCTCTTAC
CTCTCCCCCTGCTGCCTGTGCTCGTGCTGCTGCTGCTGGTACCAGTGTCA
TCACTCGTATTCGTGCTGCTTCAGCTGATTCGGCTGTCCTTATTCTTTTT
CCTCTTCTCCTCCCCCTCCTCAAAGGATCCTGATAATTGCCTGGTGTTTT
TTTGGGTATTTTTGCAACAGAAGCGGCAGCAGTTTCGCCCCCTGAGCGTG
CTGAACTTGCTGCGATGGCGCTTAGGCGTCTTGCGATACTTGATGCATCG
ACGAGGCCCCGATCGAGGAGTGGAGTGCTTCGCGAACACTCGGGTACGCT
TGGGCGTACTGCGAGAAGGGGTGCGGATCTTCTTCTTCCTGTAA
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protein sequence of NO22G00100.1

>NO22G00100.1-protein ID=NO22G00100.1-protein|Name=NO22G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MQNAKCYNVGSLSLAFFLLFRLLLMLLIELLQLLKVLVLLLFVGKMEGFL
CLPLPLLLLLLPLLLLPLLLFLDPFRFWSCLLLPLPLLPVLVLLLLVPVS
SLVFVLLQLIRLSLFFFLFSSPSSKDPDNCLVFFWVFLQQKRQQFRPLSV
LNLLRWRLGVLRYLMHRRGPDRGVECFANTRVRLGVLREGVRIFFFL*
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mRNA from alignment at chr22:42048..42889-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G00100.1 ID=NO22G00100.1|Name=NO22G00100.1|organism=Nannochloropsis oceanica|type=mRNA|length=842bp|location=Sequence derived from alignment at chr22:42048..42889- (Nannochloropsis oceanica)
ATGCAAAATGCAAAATGTTACAACGTCGGATCCCTCTCACTAGCTTTCTT
TCTCCTCTTCCGCCTCCTCCTAATGCTGTTGATCGAATTATTGCAACTGC
TGAAAGTGCTCGTGCTGCTGCTCTTCGTGGGAAAGATGGAGGGCTTTCTC
TGTCTCCCCCTCCCCCTCCTGTTGCTGCTTCTGCCGCTCCTACTCCTCCC
ACTCTTACTCTTCCTCGACCCTTTCCGGTTTTGGTCCTGTCTCCTCTTAC
CTCTCCCCCTGCTGCCTGTGCTCGTGCTGCTGCTGCTGGTACCAGTGTCA
TCACTCGTATTCGTGCTGCTTCAGCTGATTCGGCTGTCCTTATTCTTTTT
CCTCTTCTCCTCCCCCTCCTCAAAGGATCGTGAGTATGTGTGGAGAGCAA
GATACCTCATTTAGCGTCAAACTATATCGTTGCTGCCGTGGAAAAATGAT
CACCTAGTAGCTGATAATTGCCTGGTGTTTTTTTGGGTATTTTTGCAACA
GAAGGTACGTGCCCTTTGGCCTATAATACGTGGCCCATCGTGTCTTTGCT
TCTGTAGCCATCCTCCACATTTCCTCCTTGTCTTTGTAAGTTGACCCTTC
TCGTTTCCCTCCCTTATCTGGCATACCTCTTATCCGTGCTTTTCCTGCTC
CTCCGCCTGTGGCCTCAACAGCGGCAGCAGTTTCGCCCCCTGAGCGTGCT
GAACTTGCTGCGATGGCGCTTAGGCGTCTTGCGATACTTGATGCATCGAC
GAGGCCCCGATCGAGGAGTGGAGTGCTTCGCGAACACTCGGGTACGCTTG
GGCGTACTGCGAGAAGGGGTGCGGATCTTCTTCTTCCTGTAA
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Coding sequence (CDS) from alignment at chr22:42048..42889-

>NO22G00100.1 ID=NO22G00100.1|Name=NO22G00100.1|organism=Nannochloropsis oceanica|type=CDS|length=594bp|location=Sequence derived from alignment at chr22:42048..42889- (Nannochloropsis oceanica)
ATGCAAAATGCAAAATGTTACAACGTCGGATCCCTCTCACTAGCTTTCTT
TCTCCTCTTCCGCCTCCTCCTAATGCTGTTGATCGAATTATTGCAACTGC
TGAAAGTGCTCGTGCTGCTGCTCTTCGTGGGAAAGATGGAGGGCTTTCTC
TGTCTCCCCCTCCCCCTCCTGTTGCTGCTTCTGCCGCTCCTACTCCTCCC
ACTCTTACTCTTCCTCGACCCTTTCCGGTTTTGGTCCTGTCTCCTCTTAC
CTCTCCCCCTGCTGCCTGTGCTCGTGCTGCTGCTGCTGGTACCAGTGTCA
TCACTCGTATTCGTGCTGCTTCAGCTGATTCGGCTGTCCTTATTCTTTTT
CCTCTTCTCCTCCCCCTCCTCAAAGGATCCTGATAATTGCCTGGTGTTTT
TTTGGGTATTTTTGCAACAGAAGCGGCAGCAGTTTCGCCCCCTGAGCGTG
CTGAACTTGCTGCGATGGCGCTTAGGCGTCTTGCGATACTTGATGCATCG
ACGAGGCCCCGATCGAGGAGTGGAGTGCTTCGCGAACACTCGGGTACGCT
TGGGCGTACTGCGAGAAGGGGTGCGGATCTTCTTCTTCCTGTAA
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Synonyms
Publications