NO21G02560.1, NO21G02560.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G02560.1
Unique Name	NO21G02560.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2168
Alignment location	chr21:779096..784427 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:779096..784427 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G02560.1 vs.
Match: EWM29469.1 (mmpl domain protein [Nannochloropsis gaditana])

HSP 1 Score: 607.1 bits (1564), Expect = 7.100e-170
Identity = 315/398 (79.15%), Postives = 350/398 (87.94%), Query Frame = 0

Query:  304 RFISHRSYGLSAFVLLLALALPAMVQLKDLETSVEFDLMLPYGSSSYTTLENIAGGFGGPGMVFPFKLLFIDSEKNGIFTETGFERMSAVLSSLIENAPPLQLKDVTGVMALGGEEVSFREMARALNATVPTSKQFTLRTLYDTLISTDGKASFATLTLPIDPYSPEGQTWIDTARDVLDVLEPSLALTLHLDGPAAVIHDAVGSVLAAFPTMISITLAVVFLLIGLAYRSLVAPLRSVLTIGLTLGVVYGLAVCVYQWGALDGLHIRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRVLEYRMEGHTDQGALVRGMVNTGHIITAAGVIMAVAFSGLLFSSELILNQTAFLLVLSVLLDTFVVRTFLVPILMTWSGAKTWWPRGNLPAPTKDL 702
            RFISH+ YGL A +LLLALALP  VQLKD+ETSVEFDLMLP+GS S  TLE I+  +GG G+VFP+K++FIDSE   IFT   +  MS VL+SL+E+APPL+L DVTG+M LGG+EVS+ EM  ALNATVPT++QFTL+TL DTL+S++GKA++ATLTL IDPYS EGQ WIDT RD+L   E S  LTLHLDGPAAVIHDAVGSVL+AFPTMISITLAVVF LIG+AYRS+VAPLRSVLTI LTL  VYGLAVCVYQWGA DGL +RALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTR+LEYRME HTDQGALVRGMVNTGHIITAAG+IMAVAFSGLLFSSELILNQTAFLLV+SVLLDTF+VRTFLVPILMTWSGA TWWPR  LP PTKDL
Sbjct:   13 RFISHKPYGLGALLLLLALALPVAVQLKDMETSVEFDLMLPFGSGSCNTLETISSNYGGAGVVFPYKVIFIDSED--IFTPQSYAAMSHVLASLVESAPPLELMDVTGIMVLGGQEVSYAEMTAALNATVPTTRQFTLQTLRDTLVSSNGKATYATLTLTIDPYSSEGQAWIDTVRDILKGSESSSGLTLHLDGPAAVIHDAVGSVLSAFPTMISITLAVVFFLIGVAYRSIVAPLRSVLTIALTLTFVYGLAVCVYQWGAFDGLGLRALGQSGSLAWLPLVMCFSIIVGLGLDYDVFLVTRILEYRMEAHTDQGALVRGMVNTGHIITAAGIIMAVAFSGLLFSSELILNQTAFLLVVSVLLDTFIVRTFLVPILMTWSGAYTWWPRQRLPTPTKDL 408

The following BLAST results are available for this feature:

BLAST of NO21G02560.1 vs.

BLAST of NO21G02560.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29469.1	7.100e-170	79.15	mmpl domain protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G02560	NO21G02560	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G02560.1	NO21G02560.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G02560.1.cds1	NO21G02560.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds2	NO21G02560.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds3	NO21G02560.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds4	NO21G02560.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds5	NO21G02560.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds6	NO21G02560.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds7	NO21G02560.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds8	NO21G02560.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds9	NO21G02560.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds10	NO21G02560.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds11	NO21G02560.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds12	NO21G02560.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds13	NO21G02560.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds14	NO21G02560.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds15	NO21G02560.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02560.1.cds16	NO21G02560.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:779096..784427-
coding sequence from alignment at chr21:779096..784427-

mRNA sequence

>NO21G02560.1 ID=NO21G02560.1|Name=NO21G02560.1|organism=Nannochloropsis oceanica|type=mRNA|length=2168bp
CCTCCCTTTGCTCGACCGATCCTTGCTTGCTTCTCCCTCCATGGATGCAC
CCCTCCTCCATCATCCATCATCTTGTCTCCATCGTTTCCCCCCCTTCCTC
ACCTGTTTCCTTGCCCTTCCTCCCTCCCTCCCTTCCCCAGGACCTCGCGG
ACACCGTCACCTCTGGCTTGACGGGCCTGGGCGCCTTCAGTGTGGATATC
ACAGACGGCGTTAAGCAAGACTCAGCCAGAATCGACATTTTCGTCCTCCC
CCTCGCCCTCTTAATCCTGGCTTGCGTCCTCCACTCCTTGCCCCTGATGC
TCATCCCTCTCCTCACCATCACCGTCACGCTCCTGGGGCAGTTCTTGGTC
ATGTTCCCCATCGCCCAGCGTGTGGATGTGGTTTCCTTCGCCCCCACCGT
CATGGTCTCCCTCTCCATAGCCATGGGCATCGACTACAGCCTCTTTCAAC
TCACGCGCTTCATGGACGGCATCCACGCCGGCAAGAACCTCTATTCCTCA
GTCTGCCTCATGATCGAGAGTGCAGGGTACATCATCCTCGTCAGCGGCTC
CACCCTCTGTGTCTCTTTTCTCGGCCTGATTTTCCTTCCCATGGAGATTC
TTCGCTCTTTGGGACTCGCCGCGTCCGTGACCATCCTGACGGCGCTGCTC
GTCAACCTCTCCCTCACTCCCTCCCTCCTCCTCGTCCTCGGTCCCGCCCT
CCTCAGAGCAGACGAATGGGTGAACGCCTGGGTCAGCAGAGGGAGGTGCT
GGAAGAGGGGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGCGATG
GGCGTCCCGTTGCTGGAGGAGAAGGAGAAGAAGGTGGAGGGGGGGAAGGA
GGGAGGGAAGAAGAAGGAGGCAGTGGAGAAGGATGAGGTGGACGAGGGGT
ACGAGTGCGATGAATCGGAGCCGCTGAGGAAAGGATGTTGGTTGCGGCTG
GCAAGGTTCATCTCACACAGATCTTACGGGCTCAGCGCCTTCGTCCTTCT
CCTGGCCCTCGCGCTCCCTGCGATGGTGCAGCTTAAGGACCTCGAGACGA
GCGTGGAGTTCGACTTGATGCTGCCCTACGGCTCCTCATCTTACACTACC
CTCGAGAATATCGCCGGGGGCTTCGGAGGGCCCGGCATGGTCTTCCCCTT
CAAGCTCCTCTTCATCGACAGTGAGAAAAACGGTATTTTTACCGAGACGG
GGTTTGAACGCATGTCAGCTGTCCTCTCTTCTTTGATTGAAAACGCACCT
CCACTGCAGCTCAAGGACGTCACCGGCGTGATGGCTTTGGGAGGAGAGGA
GGTGTCTTTTAGGGAGATGGCGCGAGCCTTAAACGCCACCGTGCCCACGT
CCAAGCAGTTCACCTTGAGGACGCTTTACGACACCTTGATCTCGACAGAC
GGGAAAGCCTCTTTCGCCACCCTGACCCTCCCCATCGATCCATACTCTCC
TGAAGGGCAGACCTGGATCGACACCGCCCGTGACGTGCTAGACGTGCTGG
AGCCCTCTCTCGCCCTCACGCTCCACCTCGACGGGCCCGCGGCAGTGATC
CATGATGCGGTGGGCTCCGTCCTGGCTGCCTTCCCCACCATGATCAGCAT
CACACTCGCGGTGGTCTTCCTCCTCATCGGACTCGCCTACCGGAGCCTCG
TCGCCCCCCTTCGCTCCGTCCTCACCATTGGCTTAACCCTCGGTGTTGTC
TACGGCCTCGCCGTGTGTGTCTATCAGTGGGGTGCCTTGGACGGGCTGCA
TATCCGGGCCCTTGGCCAGTCGGGATCCCTGGCATGGCTTCCGTTAGTGA
TGTGTTTCTCGATCATCGTCGGCCTCGGCCTGGACTACGACGTCTTCCTC
GTCACTCGGGTTCTGGAGTATAGGATGGAGGGACACACCGATCAAGGTGC
CTTGGTTCGAGGCATGGTCAACACGGGACATATCATCACGGCCGCCGGTG
TGATTATGGCTGTGGCTTTTTCAGGATTGCTCTTCTCCTCGGAGCTCATC
CTCAATCAAACCGCCTTCCTCCTTGTTCTCTCCGTCCTGCTCGACACCTT
CGTCGTGCGTACATTCCTCGTTCCCATCCTAATGACATGGAGTGGTGCTA
AGACATGGTGGCCGAGAGGAAACCTTCCCGCCCCCACCAAGGACCTAGGA
GAGGACGGGTGGATGTGA

protein sequence of NO21G02560.1

>NO21G02560.1-protein ID=NO21G02560.1-protein|Name=NO21G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=708bp
MHPSSIIHHLVSIVSPPSSPVSLPFLPPSLPQDLADTVTSGLTGLGAFSV
DITDGVKQDSARIDIFVLPLALLILACVLHSLPLMLIPLLTITVTLLGQF
LVMFPIAQRVDVVSFAPTVMVSLSIAMGIDYSLFQLTRFMDGIHAGKNLY
SSVCLMIESAGYIILVSGSTLCVSFLGLIFLPMEILRSLGLAASVTILTA
LLVNLSLTPSLLLVLGPALLRADEWVNAWVSRGRCWKRGGEGGREGGREG
AMGVPLLEEKEKKVEGGKEGGKKKEAVEKDEVDEGYECDESEPLRKGCWL
RLARFISHRSYGLSAFVLLLALALPAMVQLKDLETSVEFDLMLPYGSSSY
TTLENIAGGFGGPGMVFPFKLLFIDSEKNGIFTETGFERMSAVLSSLIEN
APPLQLKDVTGVMALGGEEVSFREMARALNATVPTSKQFTLRTLYDTLIS
TDGKASFATLTLPIDPYSPEGQTWIDTARDVLDVLEPSLALTLHLDGPAA
VIHDAVGSVLAAFPTMISITLAVVFLLIGLAYRSLVAPLRSVLTIGLTLG
VVYGLAVCVYQWGALDGLHIRALGQSGSLAWLPLVMCFSIIVGLGLDYDV
FLVTRVLEYRMEGHTDQGALVRGMVNTGHIITAAGVIMAVAFSGLLFSSE
LILNQTAFLLVLSVLLDTFVVRTFLVPILMTWSGAKTWWPRGNLPAPTKD
LGEDGWM*

mRNA from alignment at chr21:779096..784427-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G02560.1 ID=NO21G02560.1|Name=NO21G02560.1|organism=Nannochloropsis oceanica|type=mRNA|length=5332bp|location=Sequence derived from alignment at chr21:779096..784427- (Nannochloropsis oceanica)
CCTCCCTTTGCTCGACCGATCCTTGCTTGCTTCTCCCTCCATGGATGCAC
CCCTCCTCCATCATCCATCATCTTGTCTCCATCGTTTCCCCCCCTTCCTC
ACCTGTTTCCTTGCCCTTCCTCCCTCCCTCCCTTCCCCAGGACCTCGCGG
ACACCGTCACCTCTGGCTTGACGGGCCTGGGCGCCTTCAGTGTGGATATC
ACAGACGGCGTTAAGCAAGACTCAGCCAGGTACCGCCCTTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTC
CCCTCCTTCTCCCTTCCCTCCTTTGTGGTCCCCTCTTCCCGTCTCGCAGG
GAAGGGTGAGATTCCACAACCCTCTCCTCCAGCCCGCCCTCCCTCACCCT
CCCCCTCCCTCCCTCCCTCCCTCTCTCAGAATCGACATTTTCGTCCTCCC
CCTCGCCCTCTTAATCCTGGCTTGCGTCCTCCACTCCTTGCCCCTGATGC
TCATCCCTCTCCTCACCATCACCGTCACGCTCCTGGGGCAGGTAAGCCCT
CCCTCCCTCATTCCCTCCCTCCCTCCCTCCACTATCTGCCCCGTATGCTC
ATTCCTCGACTCGTCACCAGCACCATCCCGCTCCTGGGGCAGATAGAGAG
TGGGAGGAAGAGATAAAGAAAGGAAGTGAGAGTGCTCTAGACCTCTGCTG
GCTTTTGGCGAGGGAGGGAGGGAGGAAGGGAGAGAGGGAGGAAGGGCAGG
AGGAGGGATTCATTCATTTGTTGATTGGTATTATGTCTTATTCCACACCC
CTTCCCATTTATATTCCAGTTCTTGGTCATGTTCCCCATCGCCCAGCGTG
TGGATGTGGTTTCCTTCGCCCCCACCGTCATGGTCTCCCTCTCCATAGCC
ATGGGCATCGACTACAGCCTCTTTCAACTCACGCGGTACCTCCCTCCCTC
CCTCCCTCCCTCCCTCTCGCATCCCCCTTCAACGAGCCGGTCAACACGAC
GTCTACATCTCCCGACTGCTCAGCACACCCCAACCCTCCCTCCCCCCTCC
CTCCCTCCCTCCCTCCTTCAGCTTCATGGACGGCATCCACGCCGGCAAGA
ACCTCTATTCCTCAGTCTGCCTCATGATCGAGAGTGCAGGGTACATCATC
CTCGTCAGCGGCTCCACCCTCTGTGTCTCTTTTCTCGGTACGTCCTCCCT
CCCTCCCTTCTTCCCTCCTCACACCCACGCCTCTCTCTTTCCCTCTCCCT
TCCCATCTCTCTCCCTCTCTCCTCCCCACACCCATCCACCTCCCCCTCCC
TCCCTCCCTTCCCCCCCCCCTTCCTCCTCCTAGGCCTGATTTTCCTTCCC
ATGGAGATTCTTCGCTCTTTGGGACTCGCCGCGTCCGTGACCATCCTGAC
GGCGCTGCTCGTCAACCTCTCCCTCACTCCCTCCCTCCTCCTCGTCCTCG
GTCCCGCCCTCCTCAGAGCAGACGAATGGGTGAACGCCTGGGTCAGCAGA
GGGAGGTGCTGGAAGAGGGGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGCGATGGGCGTCCCGTTGCTGGAGGAGAAGGAGAAGAAGGTGGAGG
GGGGGAAGGAGGGAGGGAAGAAGAAGGAGGCAGTGGAGAAGGATGAGGTG
GACGAGGGGTACGAGTGCGATGAATCGGAGCCGCTGAGGAAAGGATGTTG
GTTGCGGCTGGCAAGGTGAGGGAAGAAGGGACGGAGGGAGAAGAGGAGAG
AAGGAGAGAGGAAGGGAGAGAGCCTTTCGGACTTCGTTTTGCGAAGGAAG
AAAATGATCACTTTCTTCGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTAGGTTCATCTCACACAGATCTTACGGGCTCAGCGCCTTCGTCCTTCTC
CTGGCCCTCGCGCTCCCTGCGATGGTGCAGCTTAAGGACCTCGAGACGAG
CGGTAAGAAGGAGGAAGAGGGGAGGGAATGGAGGGAGGGAAAACCAGAAT
TCATGAATCATTTGCCTCTCCCTCCCTCCCTTCCTCCCTCCCTCCTTCCC
AGTGGAGTTCGACTTGATGCTGCCCTACGGCTCCTCATCTTACACTACCC
TCGAGAATATCGCCGGGGGCTTCGGAGGGCCCGGCATGGTCTTCCCCTTC
AAGCTCCTCTTCATCGACAGGTGGGTATGCAGGCCATCCCTCCTTCCCTC
CCTCCCTCCCCATCACCCCCTCCCCCTTCCCCATATTCTTTGGTTGGTTT
CTCTCTTTATTTTAATGGCTCGATGTCTCTCTCGTCTGGCGGAAACGCAG
AACAAAATATCTGACCCTCCCACCCCTCTGACCGCCCGTCGTCTCCCCCC
CCTCCCTCCCTCCCTCTCTTCCTCCCTCCCTTCAGTGAGAAAAACGGTAT
TTTTACCGAGACGGGGTTTGAACGCATGTCAGCTGTCCTCTCTTCTTTGA
TTGAAAACGCACCTCCACTGCAGCTCAAGGACGTCACCGGCGTGATGGCT
TTGGGAGGAGAGGTACGAAAGGAGGGAGAGGGGAGGGAGGGAGGGAAGGA
GGGAGGGCGGAATAGCTCACGAACGGTTGAAGAAGCTAAGCTCAAGGGCG
ACACTATCCGGGCTGCACTGAGAGAGAAGGAAAGGAGGGAAGGCGAGAAG
GAGAGGGGAAGGGAAGGCGAGGCAATGCATCACGCTCACCCTCGTTTTGC
TGAGTAAGGTGAACCGAAGGAGTGATACGGGGAAGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAAGGAGGAACCAGTCCAAAACCCCCTCACCTCCCTC
GCTTCATAATCCCCCTGGTGACAGGAGGTGTCTTTTAGGGAGATGGCGCG
AGCCTTAAACGCCACCGTGCCCACGTCCAAGCAGTTCACCTTGAGGGTAA
GAGGGAGGAAGGATCCTCGCACCTGAATAGCACCGTGGCTCACCTTGAAG
ATGGGGGGGAGGGAGGGAGGGAGGAGGGGAACAGAGATGAAAGCAAGGAT
GGAGGGAAGAGGGAACAGTATTTCGAAAGCAACCCAGGCTGAATGAAACA
CAATTTTAAAACTGCTGTCGATCCCAAAGCCAGCTTCCCTCCCTCCCTCC
CTCCTTCCCTCCTTCCCTCCCTCCCTCCAACCAACCCTCCCTCCCTCCCT
CCCTCCCTCCTTCCCTCCTTCCCTCCCTCCCTCCAACCAACCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCT
CCCTCCAACCATCCATCCATCCATCCATCCATCCCTCAGACGCTTTACGA
CACCTTGATCTCGACAGACGGGAAAGCCTCTTTCGCCACCCTGACCCTCC
CCATCGATCCATACTCTCCTGAAGGGCAGGTATGTTGCACCCCTCTATCC
CTGCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTGCCCGCCCGTCC
TCATCTCCTCCCTCCCTCCCTCCCTTTCCCTCGGTTCCTTTTTATCGTCT
TTCCGTCTGCCTGACCATACCTCTCTTCCCTCCCTTCCTCCTCCCTCCCT
CCTCCAGACCTGGATCGACACCGCCCGTGACGTGCTAGACGTGCTGGAGC
CCTCTCTCGCCCTCACGCTCCACCTCGACGGGCCCGCGGCAGTGATCCAT
GATGCGGTAGGCAGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGTGGGTTGTCGCACCCTCGCACCATTTGCATTTTCCCCTCTTCAT
TACGTTGTTGGAATTTATTCTTCTTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCTTCCCTCCCTCCCTCCCCCCCTTTCAAGGTGGGCTCCGT
CCTGGCTGCCTTCCCCACCATGATCAGCATCACACTCGCGGTGGTCTTCC
TCCTCATCGGACTCGCCTACCGGAGCCTCGTCGCCCCCCTTCGCTCCGTC
CTCACCATTGGCTTAACCCTCGGTGTTGTCTACGGCCTCGCCGTGTGTGT
CTATCAGTGGGGTGCCTTGGACGGGCTGCATATCCGGGCCCTTGGCCAGG
TGCGTGCGAGGAGGGAGTCGGCGGATGGATGGTTTCCTTTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCTTCTCTCCGTTCTTCTTTCTTCCTTA
CCTTTCTTCTTTTCTTTCCCTGCTCCTGAGCCTCCTTTTCTCTTGCTAAC
GAACCCAGGCAAAGCCTAACCTCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCTTCAGTCGGGATCCCTGGCATGGCTT
CCGTTAGTGATGTGTTTCTCGATCATCGTCGGCCTCGGCCTGGACTACGA
CGTCTTCCTCGTCACTCGGGTTCTGGAGTATAGGATGGAGGGACACACCG
ATCAAGGCACGTACTGAGCACCCCCTCCCTTCCTCCCTCCCTCCCTCCCT
CCCTCCCTTTCGTTCTTGCTTGAGGCAACTGGGTGCTGACTGGCACAGAG
AATGGAAGGACAGACCAATACTTATAGAAAGAGGGAGGGAGGGAGGGAGG
GAAGTGGGAGGGAAGGAGGGAGAGAGGGCTGGTGTCAGACTTTTTGCCAA
TGTAGAGTTTGATATGCATACCTGTATCCACACGTCTGTCCCTCCCTGCC
TTTCCCTGTCCTCCCTCTCTCCCCTCCTCCCTTCCTCCCTCCTTTCTTCG
CAGGTGCCTTGGTTCGAGGCATGGTCAACACGGGACATATCATCACGGCC
GCCGGTGAGGGAGGGAGGGAGGGAGGGAGAGAGGAATTGACAGGGGGGAG
AGAGCGAGGGATGAGGATGGCTCCTGTTCTTGTTGTCACCCTGAAGTAGA
GGGGGTGGAAGAAGGGAGGGATGGAGGGAGAGGAGGACGGTTCATACTCA
CTCCACTTACTCGTGCAATTCCCAGGTGTGATTATGGCTGTGGCTTTTTC
AGGATTGCTCTTCTCCTCGGAGGTAGGTTTAAAATGGGAAAGAGGACGGG
AGGGAAGGAGGGAGAGAGGGAGGGACGATAAGACAATGCTCATCTTTCCA
GATCATCACATGTCTCATCTGTTCCCTGCCTCCCTCATCCCCATCCACCT
CCCTTTAGCTCATCCTCAATCAAACCGCCTTCCTCCTTGTTCTCTCCGTC
CTGCTCGACACCTTCGTCGTGCGTACATTCCTCGTTCCCATCCTAATGAC
ATGGAGTGGTGCTAAGACATGGTGGCCGAGAGGAAACCTTCCCGCCCCCA
CCAAGGACCTAGGAGAGGACGGGTGGATGTGA

Coding sequence (CDS) from alignment at chr21:779096..784427-

>NO21G02560.1 ID=NO21G02560.1|Name=NO21G02560.1|organism=Nannochloropsis oceanica|type=CDS|length=2124bp|location=Sequence derived from alignment at chr21:779096..784427- (Nannochloropsis oceanica)
ATGCACCCCTCCTCCATCATCCATCATCTTGTCTCCATCGTTTCCCCCCC
TTCCTCACCTGTTTCCTTGCCCTTCCTCCCTCCCTCCCTTCCCCAGGACC
TCGCGGACACCGTCACCTCTGGCTTGACGGGCCTGGGCGCCTTCAGTGTG
GATATCACAGACGGCGTTAAGCAAGACTCAGCCAGAATCGACATTTTCGT
CCTCCCCCTCGCCCTCTTAATCCTGGCTTGCGTCCTCCACTCCTTGCCCC
TGATGCTCATCCCTCTCCTCACCATCACCGTCACGCTCCTGGGGCAGTTC
TTGGTCATGTTCCCCATCGCCCAGCGTGTGGATGTGGTTTCCTTCGCCCC
CACCGTCATGGTCTCCCTCTCCATAGCCATGGGCATCGACTACAGCCTCT
TTCAACTCACGCGCTTCATGGACGGCATCCACGCCGGCAAGAACCTCTAT
TCCTCAGTCTGCCTCATGATCGAGAGTGCAGGGTACATCATCCTCGTCAG
CGGCTCCACCCTCTGTGTCTCTTTTCTCGGCCTGATTTTCCTTCCCATGG
AGATTCTTCGCTCTTTGGGACTCGCCGCGTCCGTGACCATCCTGACGGCG
CTGCTCGTCAACCTCTCCCTCACTCCCTCCCTCCTCCTCGTCCTCGGTCC
CGCCCTCCTCAGAGCAGACGAATGGGTGAACGCCTGGGTCAGCAGAGGGA
GGTGCTGGAAGAGGGGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GCGATGGGCGTCCCGTTGCTGGAGGAGAAGGAGAAGAAGGTGGAGGGGGG
GAAGGAGGGAGGGAAGAAGAAGGAGGCAGTGGAGAAGGATGAGGTGGACG
AGGGGTACGAGTGCGATGAATCGGAGCCGCTGAGGAAAGGATGTTGGTTG
CGGCTGGCAAGGTTCATCTCACACAGATCTTACGGGCTCAGCGCCTTCGT
CCTTCTCCTGGCCCTCGCGCTCCCTGCGATGGTGCAGCTTAAGGACCTCG
AGACGAGCGTGGAGTTCGACTTGATGCTGCCCTACGGCTCCTCATCTTAC
ACTACCCTCGAGAATATCGCCGGGGGCTTCGGAGGGCCCGGCATGGTCTT
CCCCTTCAAGCTCCTCTTCATCGACAGTGAGAAAAACGGTATTTTTACCG
AGACGGGGTTTGAACGCATGTCAGCTGTCCTCTCTTCTTTGATTGAAAAC
GCACCTCCACTGCAGCTCAAGGACGTCACCGGCGTGATGGCTTTGGGAGG
AGAGGAGGTGTCTTTTAGGGAGATGGCGCGAGCCTTAAACGCCACCGTGC
CCACGTCCAAGCAGTTCACCTTGAGGACGCTTTACGACACCTTGATCTCG
ACAGACGGGAAAGCCTCTTTCGCCACCCTGACCCTCCCCATCGATCCATA
CTCTCCTGAAGGGCAGACCTGGATCGACACCGCCCGTGACGTGCTAGACG
TGCTGGAGCCCTCTCTCGCCCTCACGCTCCACCTCGACGGGCCCGCGGCA
GTGATCCATGATGCGGTGGGCTCCGTCCTGGCTGCCTTCCCCACCATGAT
CAGCATCACACTCGCGGTGGTCTTCCTCCTCATCGGACTCGCCTACCGGA
GCCTCGTCGCCCCCCTTCGCTCCGTCCTCACCATTGGCTTAACCCTCGGT
GTTGTCTACGGCCTCGCCGTGTGTGTCTATCAGTGGGGTGCCTTGGACGG
GCTGCATATCCGGGCCCTTGGCCAGTCGGGATCCCTGGCATGGCTTCCGT
TAGTGATGTGTTTCTCGATCATCGTCGGCCTCGGCCTGGACTACGACGTC
TTCCTCGTCACTCGGGTTCTGGAGTATAGGATGGAGGGACACACCGATCA
AGGTGCCTTGGTTCGAGGCATGGTCAACACGGGACATATCATCACGGCCG
CCGGTGTGATTATGGCTGTGGCTTTTTCAGGATTGCTCTTCTCCTCGGAG
CTCATCCTCAATCAAACCGCCTTCCTCCTTGTTCTCTCCGTCCTGCTCGA
CACCTTCGTCGTGCGTACATTCCTCGTTCCCATCCTAATGACATGGAGTG
GTGCTAAGACATGGTGGCCGAGAGGAAACCTTCCCGCCCCCACCAAGGAC
CTAGGAGAGGACGGGTGGATGTGA

Synonyms

Publications