NO21G02040.2, NO21G02040.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G02040.2
Unique Name	NO21G02040.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2904
Alignment location	chr21:600312..604545 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:600312..604545 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G02040.2 vs.
Match: CBJ30684.1 (ATP-binding cassette, sub-family D, member 4 [Ectocarpus siliculosus])

HSP 1 Score: 212.6 bits (540), Expect = 4.900e-51
Identity = 190/538 (35.32%), Postives = 274/538 (50.93%), Query Frame = 0

Query:   18 DDTEALLSPASQEG---GTTSNSSNSSSSSSGAGPPPRSRRWRRGWRRPAPYTATTAAAAAPTPLSSPSSISGAAPFKAAAGEQQPPPSHPPVSRQDMARLLRLALD---IKEGRWMVPLTLVLSTAAYEVAGNRVMVVMSDFYVSITGHDIDLYLRTLWLSMLIVVAVVLCKTVQVLAIESLALQSRHRLQQHLHFLYFLPPSLPPSSPSEEEEEEEEEEEEEEVEVAHKRGSSSSSSSIGGSNGQRRRRRRGGGGGRRGRRGGGAYSILLPPLQPQQLEHPSESSSSSSPPPSLLDNPDHRLTSDVDLFTVKLSEVIGKTIAVPALIIYYTWYLAFIFGWTAPVACYVYFLVGAYVNALFFKPLIAAVYQQERLEGHFRYLHASIRGAVEPIALYGGWQVEKR---RAGQAFDSVCANRRRIILQHAPLYLSTFFFDYLGSVINYAAVGASVLWLTYASKATPSEISGLVAKGSFSCLYLINAFSTLLDASETVTDLGGLGSRLSELLH--GLSPSPP-SLPPSSSSSSSSRTITN 544
            D+T  LL PA+ +    G T  +     +SSGA                 P      AAA+  P  S  + + AA   +AAG+++ P S       D+  L+R+ L      E RW+ PL L ++  AYEV    ++ V+SDFY++I+  D  L+++ LW S+L+V  V   K  + LA E+ AL  R RL   LH  ++L   +P    + E   +             KRG  +S  ++G          RGGG G                           ++   SP   L+DNPD R+T+D +      + V+ +T+  P L+ +YTWYL  +FGW APVACYVYF+V + +N    K ++ AVY +++ EG FRY HA +R   E +   G   VE R   R G++F++V      +I +H PLYL T FFDYLGS++NYAAVG ++L+L+ A     +EI+ LVA+GSFSCLYLI+AFS  L ASE  + +GG   R++ELL   GLS S   +  P S+  S  R   N
Sbjct:   27 DETHNLLLPAAADALDDGATRRTGLLWLNSSGAAA--------------IPGCDAVPAAASTDPRRSGETTAAAA---SAAGQRRSPSSFVA----DLGMLVRVFLLRGLFVERRWVFPLILTVTATAYEVCAASILNVISDFYLAISTLDAQLFVQVLWRSLLVVTVVAALKAGRDLAKEACALVWRQRLVLFLH-SWYLRGKMPYVLSTGEAGRD-------------KRG-GASFGNVGAPGRVDGGCTRGGGNG--------------------------VAAGGESP---LIDNPDQRVTADAEALVAAFATVLHETLVAPGLVAFYTWYLVGMFGWVAPVACYVYFIVASAINWAVVKTVVPAVYWKDKAEGTFRYDHAWLRTHSESVVFCGVGAVEGRERDRLGESFNAVVTAWWEVIRRHVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKALRASEAASRMGGSARRVAELLRATGLSDSDARAFGPWSTEPSVRRPSRN 499

The following BLAST results are available for this feature:

BLAST of NO21G02040.2 vs.

BLAST of NO21G02040.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ30684.1	4.900e-51	35.32	ATP-binding cassette, sub-family D, member 4 [Ecto...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G02040	NO21G02040	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G02040.2	NO21G02040.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G02040.2.cds1	NO21G02040.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds2	NO21G02040.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds3	NO21G02040.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds4	NO21G02040.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds5	NO21G02040.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds6	NO21G02040.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds7	NO21G02040.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G02040.2.cds8	NO21G02040.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:600312..604545+
coding sequence from alignment at chr21:600312..604545+

mRNA sequence

>NO21G02040.2 ID=NO21G02040.2|Name=NO21G02040.2|organism=Nannochloropsis oceanica|type=mRNA|length=2904bp
AACGCAGAGCGCCAATTATGCCGTGGTGGCCCAACTCTTTGTCAACATTA
CGGCCGCCGCATGTCCCAGACGACACCGAGGCCCTGCTTTCTCCCGCTTC
CCAAGAAGGCGGCACCACCAGCAACAGCAGCAACAGCAGCAGCAGCAGCA
GCGGCGCTGGACCTCCCCCGAGATCGCGGCGGTGGAGAAGAGGATGGCGA
CGTCCTGCCCCCTACACCGCGACTACAGCGGCTGCTGCCGCTCCTACTCC
CTTGTCTTCTCCCTCTTCTATCTCGGGGGCCGCACCCTTCAAAGCAGCAG
CCGGGGAGCAGCAGCCCCCACCATCGCATCCCCCTGTGTCTCGTCAAGAC
ATGGCACGGCTTCTTCGCCTCGCCCTGGACATAAAAGAGGGCCGGTGGAT
GGTGCCCCTCACGCTCGTTCTCTCCACTGCTGCGTATGAAGTAGCGGGCA
ATAGGGTGATGGTCGTGATGTCTGATTTCTACGTTTCCATCACGGGGCAC
GACATCGACTTGTACTTACGCACGCTCTGGCTCTCGATGCTGATAGTAGT
GGCGGTGGTGCTGTGCAAGACCGTGCAGGTGCTTGCGATCGAATCCCTGG
CCCTCCAATCTCGACATCGGTTACAGCAACATCTACACTTCCTCTACTTC
CTCCCTCCCTCCCTCCCTCCCTCTTCCCCTTCCGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAAGAGGTGGAGGTGGCACACAAGAGGGGTA
GCAGTAGCAGCAGTAGCAGCATTGGAGGCAGCAACGGTCAAAGAAGAAGA
AGAAGAAGAGGAGGAGGGGGAGGAAGAAGAGGAAGAAGGGGAGGGGGGGC
CTACTCCATCCTCCTTCCCCCTCTCCAACCCCAGCAGCTCGAGCACCCAT
CCGAGTCGTCATCCTCGTCCTCCCCCCCTCCCTCCCTTCTCGATAACCCT
GATCACCGCCTCACCTCCGACGTGGACCTGTTCACCGTCAAGCTCTCGGA
GGTGATTGGAAAGACAATTGCCGTGCCCGCCCTCATCATTTACTATACGT
GGTATCTGGCGTTCATCTTCGGGTGGACCGCGCCTGTGGCCTGCTACGTG
TATTTTCTCGTAGGCGCCTACGTAAATGCCTTGTTTTTTAAGCCGCTGAT
CGCCGCGGTATACCAGCAGGAACGACTGGAGGGTCATTTCAGGTACCTCC
ATGCCTCCATCCGAGGAGCAGTGGAACCCATCGCGCTCTACGGGGGGTGG
CAGGTGGAGAAACGACGGGCAGGGCAGGCATTTGACTCTGTTTGCGCGAA
TCGGAGGAGGATCATCCTCCAGCACGCCCCCCTCTACCTCTCCACCTTCT
TCTTCGACTATCTCGGATCTGTCATCAATTATGCAGCCGTGGGAGCCTCT
GTGCTTTGGCTCACATACGCCAGCAAGGCCACTCCCTCGGAGATCTCGGG
CCTGGTGGCCAAGGGCTCCTTCAGCTGCCTCTACCTCATCAACGCCTTCT
CCACCCTTCTAGACGCTTCTGAAACGGTCACAGACCTCGGCGGCCTCGGC
TCTCGTCTCTCCGAGCTGCTGCATGGACTTTCCCCCTCCCCTCCCTCCCT
CCCTCCCTCCTCATCGTCGTCCTCCTCCTCGCGGACAATCACCAACCCTG
CGTCCTCCCAGGAAGAAAACGACCAAAATGATGACGAGGAAAACCGTTAC
ACCCCTCCTCCTCCTCCTCCTCCCTCCTCCCCGCCCTCCACTCCTTCGTC
CTCCGCCCTCATCACCCCTCCCTCCCCCCCTCCCTCCTCCTCCTCCTCCT
CCTCCTCCGAACCCCTTCTCCGCCTCTCTCATTTCTCCCTCCTCCTTCCC
CCCTCCTCCTCCTGCCCTTCCTCCCACCATCGATCCCTCTTCCTCCCCCT
CTCCCTCTCCCTGCATTCCGGTGAATTTCTTCTCCTTCGAGGCCCCAGCG
GCGTTGGAAAGAGCTCGCTCATAAAGGCTATAGCTGGCCTCTTCCCCCAC
AGCTCTCAAATGGGGCGCCTCGTCCTCCGTCCCTCCCTCCCCCCCTCCCT
TCCTCGAGGAGGAGGAGAAAGGAAAGAGGGAGGGGGAGTGTTTTTCGTAC
CGCAGGAGACGTACGTTTTCCCGGGCTCGCTGTTGAGTCAGGTTGTCTAC
CCGGCAGTGGTGGAAGAAGGAAGGCGGGAGGGAGGGGTGACTCCAGAGGG
GGAGGGAAGGGCTTTAAGGGCGTTGGAGGCCATGGGACTCCTGCATCTCT
GTGGTGGCACCTCCTCCTCCTCCTCCTTCTCTTTATCCTCCTCCTGCTGC
TCCTCCTCCTCCACCTTCTCTTCCACCTCCTCCTCCGCCTCCAAAGACAC
ATCTCTTGCTCCCCCTCCCCTTCCCTCCCTCCCTCCTTCCCTTTCTACCA
TTCACGGCGACTGGCAGGGACGCCTTTCGAGAGGGGAGGCTCAACGGCTG
GCGTTGTGCAGGGTGCTGTTCCACCGGCCCCTCCTTCTCTTCCTCGACGA
GGCCACTGCAGGGATTGAGAAAGAAATGGAACAAAAATTCTATGCATTGC
TGAGGAGGGGGTGGGGGGAGGGAGGGAGGGAGAGGGAGAGGGTGACGGTG
GTGTCAACGGGGCACCGAGAGAGTCTCGTCGGCCTGCATGATCGGGTCGT
GAATCTGCAGGGGCCGGGGTGAGGGAGGGAGGGAGAAGGTTAGTGAATCA
TGATGGTGACGGGAGGGACAAGAGGGGGGAGGGAAGGAGCTTAGGACAGG
CACGACAAACACATGGTTTCACCCGCGCCCGCGATGGGAAACAGCTTCTG
ATGTGGAGAGAGAGAGCTGAAACGGGTTACCGAGTGTAGAGATGTTGTAC
AGGAATAATGAGAAGAGTCCACCTGAAAATTAATGAAAGTGAAAAAGGGT
TGAA

protein sequence of NO21G02040.2

>NO21G02040.2-protein ID=NO21G02040.2-protein|Name=NO21G02040.2|organism=Nannochloropsis oceanica|type=polypeptide|length=885bp
MPWWPNSLSTLRPPHVPDDTEALLSPASQEGGTTSNSSNSSSSSSGAGPP
PRSRRWRRGWRRPAPYTATTAAAAAPTPLSSPSSISGAAPFKAAAGEQQP
PPSHPPVSRQDMARLLRLALDIKEGRWMVPLTLVLSTAAYEVAGNRVMVV
MSDFYVSITGHDIDLYLRTLWLSMLIVVAVVLCKTVQVLAIESLALQSRH
RLQQHLHFLYFLPPSLPPSSPSEEEEEEEEEEEEEEVEVAHKRGSSSSSS
SIGGSNGQRRRRRRGGGGGRRGRRGGGAYSILLPPLQPQQLEHPSESSSS
SSPPPSLLDNPDHRLTSDVDLFTVKLSEVIGKTIAVPALIIYYTWYLAFI
FGWTAPVACYVYFLVGAYVNALFFKPLIAAVYQQERLEGHFRYLHASIRG
AVEPIALYGGWQVEKRRAGQAFDSVCANRRRIILQHAPLYLSTFFFDYLG
SVINYAAVGASVLWLTYASKATPSEISGLVAKGSFSCLYLINAFSTLLDA
SETVTDLGGLGSRLSELLHGLSPSPPSLPPSSSSSSSSRTITNPASSQEE
NDQNDDEENRYTPPPPPPPSSPPSTPSSSALITPPSPPPSSSSSSSSEPL
LRLSHFSLLLPPSSSCPSSHHRSLFLPLSLSLHSGEFLLLRGPSGVGKSS
LIKAIAGLFPHSSQMGRLVLRPSLPPSLPRGGGERKEGGGVFFVPQETYV
FPGSLLSQVVYPAVVEEGRREGGVTPEGEGRALRALEAMGLLHLCGGTSS
SSSFSLSSSCCSSSSTFSSTSSSASKDTSLAPPPLPSLPPSLSTIHGDWQ
GRLSRGEAQRLALCRVLFHRPLLLFLDEATAGIEKEMEQKFYALLRRGWG
EGGRERERVTVVSTGHRESLVGLHDRVVNLQGPG*

mRNA from alignment at chr21:600312..604545+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G02040.2 ID=NO21G02040.2|Name=NO21G02040.2|organism=Nannochloropsis oceanica|type=mRNA|length=4234bp|location=Sequence derived from alignment at chr21:600312..604545+ (Nannochloropsis oceanica)
AACGCAGAGCGCCAATTATGCCGTGGTGGCCCAACTCTTTGTCAACATTA
CGGCCGCCGCATGTCCCAGACGACACCGAGGCCCTGCTTTCTCCCGCTTC
CCAAGAAGGCGGCACCACCAGCAACAGCAGCAACAGCAGCAGCAGCAGCA
GCGGCGCTGGACCTCCCCCGAGATCGCGGCGGTGGAGAAGAGGATGGCGA
CGTCCTGCCCCCTACACCGCGACTACAGCGGCTGCTGCCGCTCCTACTCC
CTTGTCTTCTCCCTCTTCTATCTCGGGGGCCGCACCCTTCAAAGCAGCAG
CCGGGGAGCAGCAGCCCCCACCATCGCATCCCCCTGTGTCTCGTCAAGAC
ATGGCACGGCTTCTTCGCCTCGCCCTGGACATAAAAGAGGTTCGTTACCT
CATCTCCTGTCAGTTTTTATCGTTTCGTGGTAAGGCGTTTCTTATGATGC
TGGTGACGTCTGACTCTCACCCCTCCCTTCCTCCCTCCCCTGCCCACAAC
TCCCTCTCTGCCCTCCCCCAGGGCCGGTGGATGGTGCCCCTCACGCTCGT
TCTCTCCACTGCTGCGTATGAAGTAGCGGGCAATAGGGTGATGGTCGTGA
TGTCTGATTTCTACGTTTCCATCACGGGGCACGACATCGACTTGTACTTA
CGCACGCTCTGGCTCTCGATGCTGATAGTAGTGGCGGTGGTGCTGTGCAA
GGTGAGGAAAGAGGGAGTGAGGAAGGGAGGGAGGGAAGAAGGGGAGCTGT
GATGGCAATGGCGCAATGCTAAACAAGGCATGGAAGGAGGGAGGGAGGGC
GAGGAGGGGAGGAAGGAGGAATGAGTCATTCAAGGGTGGTAGCAAGCCGG
CCCATCTGCCATAATTCCAATAAACCCCCCTCCCTCCCTCCCTTCCCCCA
CATCCTTCCTCCCTCCCCCCCCCAGACCGTGCAGGTGCTTGCGATCGAAT
CCCTGGCCCTCCAATCTCGACATCGGTTACAGCAACATCTACACTTCCTC
TACTTCCTCCCTCCCTCCCTCCCTCCCTCTTCCCCTTCCGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTGGAGGTGGCACACAAGA
GGGGTAGCAGTAGCAGCAGTAGCAGCATTGGAGGCAGCAACGGTCAAAGA
AGAAGAAGAAGAAGAGGAGGAGGGGGAGGAAGAAGAGGAAGAAGGGGAGG
GGGGGCCTACTCCATCCTCCTTCCCCCTCTCCAACCCCAGCAGCTCGAGC
ACCCATCCGAGTCGTCATCCTCGTCCTCCCCCCCTCCCTCCCTTCTCGAT
AACCCTGATCACCGCCTCACCTCCGACGTGGACCTGTTCACCGTCAAGCT
CTCGGAGGTGATTGGAAAGACAATTGCCGTGCCCGCCCTCATCATTTACT
GTGAGTGCCGGCGAGACGAGGGAGGGCAAGGAGGGAAGGGAGGAAGGCGG
AGGGAGGAAGATGGAGGGAGGAAGACGGAGGGGGAGAAAGAAAAGGGGAG
GAAGAGGGCGCAGGGGAGCGGAAAGGAGCGCAGGAGGAGGGAAAGCTTTG
CATCGCTCATCTCCCTCCCTCCCGCCCTCCCTCCCTCCCTCGCTAGATAC
GTGGTATCTGGCGTTCATCTTCGGGTGGACCGCGCCTGTGGCCTGCTACG
TGTATTTTCTCGTAGGCGCCTACGTAAATGCCTTGTTTTTTAAGCCGCTG
ATCGCCGCGGTATACCAGCAGGTGCGGGAGGGAGGGAGGGAGGAAGGGAG
GGAGGGAGGGAAGCTCTTGCACAGAAGGGAGTAGAAGACTTCATCCTCCC
ACTCACCCACCCACGCATCCACCTCCTCTTTTTCACCTGACTTAGAATAG
ACACATGTCTCTTACTATCATTTACCTTGCATATACGCACGACCTCCCCT
AACCACGCCCTAAGACCAATGGAACGACTGGAAGGCCACTCTTGGTGCCT
GGACGATAACCTCCCACTCACCTATCCATCCATCACCGCCTCCTCCTGCA
CCCCTAACCTCCACCCACCAACCCGTATGCTCCCCGTACTCACATTTGTA
ACATAAAGGAACGACTGGAGGGTCATTTCAGGTACCTCCATGCCTCCATC
CGAGGAGCAGTGGAACCCATCGCGCTCTACGGGGGGTGGCAGGTGGAGAA
ACGACGGGCAGGGCAGGTAGGGAGGGAAGGAAGGAAGGAGGGAGGGAAGG
GGAGGGAAGGGAGGGACGGAGAGGACCACAAATGTATTGCATCTCTACTA
AAAGTCACCCTGCCCTTCCCCTCCCTTCCCTCCCTCCCTCCCTCAGGCAT
TTGACTCTGTTTGCGCGAATCGGAGGAGGATCATCCTCCAGCACGCCCCC
CTCTACCTCTCCACCTTCTTCTTCGACTATCTCGGATCTGTCATCAATTA
TGCAGGCACGTTACTCCTCCTTCCCCTCCCTCCCTCTCCCTCCCGCCCTC
CCACCTTCCCACCGAGCTCCTGCTCCAATCGACTCCTGACCTTCCCTCCC
TCCCTCCCTCTTTCCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTTCCCA
GCCGTGGGAGCCTCTGTGCTTTGGCTCACATACGCCAGCAAGGCCACTCC
CTCGGAGATCTCGGGCCTGGTGGCCAAGGGCTCCTTCAGGTACGGAAGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGTGAT
GATTCGAGACACACATGACTCCTTCGATCGAGAGATTACACCCAACGCGA
CCAAAATCTGACCAGCAAAACTTTCTCCCTCCCTCTCTCCCTCCTTTCCT
CTAGCTGCCTCTACCTCATCAACGCCTTCTCCACCCTTCTAGACGCTTCT
GAAACGGTCACAGACCTCGGCGGCCTCGGCTCTCGTCTCTCCGAGCTGCT
GCATGGACTTTCCCCCTCCCCTCCCTCCCTCCCTCCCTCCTCATCGTCGT
CCTCCTCCTCGCGGACAATCACCAACCCTGCGTCCTCCCAGGAAGAAAAC
GACCAAAATGATGACGAGGAAAACCGTTACACCCCTCCTCCTCCTCCTCC
TCCCTCCTCCCCGCCCTCCACTCCTTCGTCCTCCGCCCTCATCACCCCTC
CCTCCCCCCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCGAACCCCTTCTC
CGCCTCTCTCATTTCTCCCTCCTCCTTCCCCCCTCCTCCTCCTGCCCTTC
CTCCCACCATCGATCCCTCTTCCTCCCCCTCTCCCTCTCCCTGCATTCCG
GTGAATTTCTTCTCCTTCGAGGCCCCAGCGGCGTTGGAAAGAGCTCGCTC
ATAAAGGCTATAGCTGGCCTCTTCCCCCACAGCTCTCAAATGGGGCGCCT
CGTCCTCCGTCCCTCCCTCCCCCCCTCCCTTCCTCGAGGAGGAGGAGAAA
GGAAAGAGGGAGGGGGAGTGTTTTTCGTACCGCAGGAGACGTACGTTTTC
CCGGGCTCGCTGTTGAGTCAGGTTGTCTACCCGGCAGTGGTGGAAGAAGG
AAGGCGGGAGGGAGGGGTGACTCCAGAGGGGGAGGGAAGGGCTTTAAGGG
CGTTGGAGGCCATGGGACTCCTGCATCTCTGTGGTGGCACCTCCTCCTCC
TCCTCCTTCTCTTTATCCTCCTCCTGCTGCTCCTCCTCCTCCACCTTCTC
TTCCACCTCCTCCTCCGCCTCCAAAGACACATCTCTTGCTCCCCCTCCCC
TTCCCTCCCTCCCTCCTTCCCTTTCTACCATTCACGGCGACTGGCAGGGA
CGCCTTTCGAGAGGGGAGGCTCAACGGCTGGCGTTGTGCAGGGTGCTGTT
CCACCGGCCCCTCCTTCTCTTCCTCGACGAGGCCACTGCAGGGATTGAGA
AAGAAATGGAACAAAAATTCTATGCATTGCTGAGGAGGGGGTGGGGGGAG
GGAGGGAGGGAGAGGGAGAGGGTGACGGTGGTGTCAACGGGGCACCGAGA
GAGTCTCGTCGGCCTGCATGATCGGGTCGTGAATCTGCAGGGGCCGGGGT
GAGGGAGGGAGGGAGAAGGTTAGTGAATCATGATGGTGACGGGAGGGACA
AGAGGGGGGAGGGAAGGAGCTTAGGACAGGCACGACAAACACATGGTTTC
ACCCGCGCCCGCGATGGGAAACAGCTTCTGATGTGGAGAGAGAGAGCTGA
AACGGGTTACCGAGTGTAGAGATGTTGTACAGGAATAATGAGAAGAGTCC
ACCTGAAAATTAATGAAAGTGAAAAAGGGTTGAA

Coding sequence (CDS) from alignment at chr21:600312..604545+

>NO21G02040.2 ID=NO21G02040.2|Name=NO21G02040.2|organism=Nannochloropsis oceanica|type=CDS|length=2655bp|location=Sequence derived from alignment at chr21:600312..604545+ (Nannochloropsis oceanica)
ATGCCGTGGTGGCCCAACTCTTTGTCAACATTACGGCCGCCGCATGTCCC
AGACGACACCGAGGCCCTGCTTTCTCCCGCTTCCCAAGAAGGCGGCACCA
CCAGCAACAGCAGCAACAGCAGCAGCAGCAGCAGCGGCGCTGGACCTCCC
CCGAGATCGCGGCGGTGGAGAAGAGGATGGCGACGTCCTGCCCCCTACAC
CGCGACTACAGCGGCTGCTGCCGCTCCTACTCCCTTGTCTTCTCCCTCTT
CTATCTCGGGGGCCGCACCCTTCAAAGCAGCAGCCGGGGAGCAGCAGCCC
CCACCATCGCATCCCCCTGTGTCTCGTCAAGACATGGCACGGCTTCTTCG
CCTCGCCCTGGACATAAAAGAGGGCCGGTGGATGGTGCCCCTCACGCTCG
TTCTCTCCACTGCTGCGTATGAAGTAGCGGGCAATAGGGTGATGGTCGTG
ATGTCTGATTTCTACGTTTCCATCACGGGGCACGACATCGACTTGTACTT
ACGCACGCTCTGGCTCTCGATGCTGATAGTAGTGGCGGTGGTGCTGTGCA
AGACCGTGCAGGTGCTTGCGATCGAATCCCTGGCCCTCCAATCTCGACAT
CGGTTACAGCAACATCTACACTTCCTCTACTTCCTCCCTCCCTCCCTCCC
TCCCTCTTCCCCTTCCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAGAGGTGGAGGTGGCACACAAGAGGGGTAGCAGTAGCAGCAGTAGC
AGCATTGGAGGCAGCAACGGTCAAAGAAGAAGAAGAAGAAGAGGAGGAGG
GGGAGGAAGAAGAGGAAGAAGGGGAGGGGGGGCCTACTCCATCCTCCTTC
CCCCTCTCCAACCCCAGCAGCTCGAGCACCCATCCGAGTCGTCATCCTCG
TCCTCCCCCCCTCCCTCCCTTCTCGATAACCCTGATCACCGCCTCACCTC
CGACGTGGACCTGTTCACCGTCAAGCTCTCGGAGGTGATTGGAAAGACAA
TTGCCGTGCCCGCCCTCATCATTTACTATACGTGGTATCTGGCGTTCATC
TTCGGGTGGACCGCGCCTGTGGCCTGCTACGTGTATTTTCTCGTAGGCGC
CTACGTAAATGCCTTGTTTTTTAAGCCGCTGATCGCCGCGGTATACCAGC
AGGAACGACTGGAGGGTCATTTCAGGTACCTCCATGCCTCCATCCGAGGA
GCAGTGGAACCCATCGCGCTCTACGGGGGGTGGCAGGTGGAGAAACGACG
GGCAGGGCAGGCATTTGACTCTGTTTGCGCGAATCGGAGGAGGATCATCC
TCCAGCACGCCCCCCTCTACCTCTCCACCTTCTTCTTCGACTATCTCGGA
TCTGTCATCAATTATGCAGCCGTGGGAGCCTCTGTGCTTTGGCTCACATA
CGCCAGCAAGGCCACTCCCTCGGAGATCTCGGGCCTGGTGGCCAAGGGCT
CCTTCAGCTGCCTCTACCTCATCAACGCCTTCTCCACCCTTCTAGACGCT
TCTGAAACGGTCACAGACCTCGGCGGCCTCGGCTCTCGTCTCTCCGAGCT
GCTGCATGGACTTTCCCCCTCCCCTCCCTCCCTCCCTCCCTCCTCATCGT
CGTCCTCCTCCTCGCGGACAATCACCAACCCTGCGTCCTCCCAGGAAGAA
AACGACCAAAATGATGACGAGGAAAACCGTTACACCCCTCCTCCTCCTCC
TCCTCCCTCCTCCCCGCCCTCCACTCCTTCGTCCTCCGCCCTCATCACCC
CTCCCTCCCCCCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCGAACCCCTT
CTCCGCCTCTCTCATTTCTCCCTCCTCCTTCCCCCCTCCTCCTCCTGCCC
TTCCTCCCACCATCGATCCCTCTTCCTCCCCCTCTCCCTCTCCCTGCATT
CCGGTGAATTTCTTCTCCTTCGAGGCCCCAGCGGCGTTGGAAAGAGCTCG
CTCATAAAGGCTATAGCTGGCCTCTTCCCCCACAGCTCTCAAATGGGGCG
CCTCGTCCTCCGTCCCTCCCTCCCCCCCTCCCTTCCTCGAGGAGGAGGAG
AAAGGAAAGAGGGAGGGGGAGTGTTTTTCGTACCGCAGGAGACGTACGTT
TTCCCGGGCTCGCTGTTGAGTCAGGTTGTCTACCCGGCAGTGGTGGAAGA
AGGAAGGCGGGAGGGAGGGGTGACTCCAGAGGGGGAGGGAAGGGCTTTAA
GGGCGTTGGAGGCCATGGGACTCCTGCATCTCTGTGGTGGCACCTCCTCC
TCCTCCTCCTTCTCTTTATCCTCCTCCTGCTGCTCCTCCTCCTCCACCTT
CTCTTCCACCTCCTCCTCCGCCTCCAAAGACACATCTCTTGCTCCCCCTC
CCCTTCCCTCCCTCCCTCCTTCCCTTTCTACCATTCACGGCGACTGGCAG
GGACGCCTTTCGAGAGGGGAGGCTCAACGGCTGGCGTTGTGCAGGGTGCT
GTTCCACCGGCCCCTCCTTCTCTTCCTCGACGAGGCCACTGCAGGGATTG
AGAAAGAAATGGAACAAAAATTCTATGCATTGCTGAGGAGGGGGTGGGGG
GAGGGAGGGAGGGAGAGGGAGAGGGTGACGGTGGTGTCAACGGGGCACCG
AGAGAGTCTCGTCGGCCTGCATGATCGGGTCGTGAATCTGCAGGGGCCGG
GGTGA

Synonyms

Publications