NO21G01580.1, NO21G01580.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G01580.1
Unique Name	NO21G01580.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3587
Alignment location	chr21:466859..470886 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:466859..470886 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G01580.1 vs.
Match: EWM22633.1 (trehalase [Nannochloropsis gaditana])

HSP 1 Score: 889.8 bits (2298), Expect = 6.400e-255
Identity = 441/588 (75.00%), Postives = 485/588 (82.48%), Query Frame = 0

Query:  237 MPMRVDPEVVLEQFHALAPSLRRDPTVLKAFLAQYFSAPGSDLVPHVPTDHTDSPPLLEGLAGHAPYQRWASDLNDFWKQLCRKVSPDVDLNPQRYSILKRTHPVVIPGGRFRESYYWDSYWIVLGLLACDMKETARGLVQNLLDDVANFGFVPNGGRIYYLNRSQPPLLSEMVLALVKHDPAGIDKHFVSSALAVLEKEYEFWMNDGERAITFSSLP---SSIDGDAHGSSSPPTPCRKHQPHHPQHVLNRYWTASNHPRPESFKEDLHHAGLADCAQGFYANIAAGAESGWDFSSRWIAPCEKGEYALERIATTTIVPVDLNTFLYRMERNLARLHDFVLTRQTSP----PTAAA---GRTAATIPSDARESWVSSKAQMFADASTRRALAMDHLLWDNHRGMWRDLWVSSNTNSSSTYSSSSRSVINSTGCTFAFEFAKVLPASNFLPLWGRVLDNPALASVASSRKLAALEGLGMSGLITKGGLQTTDTETKEQWDAPNAWSPIVHMIIEGLENLQAGDSGRLAISLAKAWLESNYLGWANTGYMYEKYNGGVPGARGEGGEYYPQVGFGWTNGVVLHLLKVYG 815
            MPMRVDPEVVL +F AL P+LRRD  VL+AFL QYF+APGSDLV HVP DH++SP LL  LA HAPYQRWA++LN FWKQLCRKVS DV LNPQRYSIL+RTHPVVIPGGRFRESYYWDSYWIVLGLLACDMK+TARGLVQNLLDDVANFGFVPNGGRIYYLNRSQPPLLSEMVLALV+HDP+GID+ FVS ALAVLE EY FWM DGERAIT S  P   +S       SSSP T  ++ +P   QHVLNRYWTAS HPRPESFKEDLHHAGLADCAQGFYANIAAGAESGWDFSSRWI+PC+KGEYALERI TT I+PVDLNTFLYRMERN+ARLHD++L RQ  P    P A A     T+  +P D+RESWVS KAQ FA+AS +RALA+D L+WD   GMWRDLW+ ++   +S   +++            F F KV PASNFLPLWGRVLDNP L SVAS RKLAAL+GL  SGLI  GG++TT+ ETKEQWD PNAWSPIVHMII+GLENL AGD+ RLA SLAKAWLESNYLGWA+TGYMYEKYNG VPGARGEGGEYYPQVGFGWTNGVVLHLLK YG
Sbjct:    1 MPMRVDPEVVLARFQALLPALRRDTKVLRAFLTQYFTAPGSDLVEHVPPDHSESPALLLSLADHAPYQRWAAELNHFWKQLCRKVSDDVFLNPQRYSILRRTHPVVIPGGRFRESYYWDSYWIVLGLLACDMKDTARGLVQNLLDDVANFGFVPNGGRIYYLNRSQPPLLSEMVLALVEHDPSGIDEAFVSEALAVLEGEYRFWMQDGERAITVSPPPPIRASTQSQTWTSSSPST-SQQAEPPAQQHVLNRYWTASIHPRPESFKEDLHHAGLADCAQGFYANIAAGAESGWDFSSRWISPCDKGEYALERITTTDIIPVDLNTFLYRMERNMARLHDYLLARQMGPGCGTPEAKAEPPRETSCKVPPDSRESWVSPKAQKFAEASAKRALAIDQLMWDQETGMWRDLWMPASGRGASNLFTAAH-----------FAFGKVRPASNFLPLWGRVLDNPTLCSVASRRKLAALDGLARSGLIVAGGVRTTNVETKEQWDCPNAWSPIVHMIIDGLENLGAGDADRLARSLAKAWLESNYLGWASTGYMYEKYNGKVPGARGEGGEYYPQVGFGWTNGVVLHLLKTYG 576

The following BLAST results are available for this feature:

BLAST of NO21G01580.1 vs.

BLAST of NO21G01580.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22633.1	6.400e-255	75.00	trehalase [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G01580	NO21G01580	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G01580.1	NO21G01580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G01580.1.cds1	NO21G01580.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G01580.1.cds2	NO21G01580.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:466859..470886-
coding sequence from alignment at chr21:466859..470886-

mRNA sequence

>NO21G01580.1 ID=NO21G01580.1|Name=NO21G01580.1|organism=Nannochloropsis oceanica|type=mRNA|length=3587bp
AACAGATGAAGTAAATTAATGATGCGCTGGACCAGAGGACCAGCGGCTTT
CGTGCTTGCGCTCAACACAAGACAGTACAGAGGAGCTACCACCTTCTTCT
TTGCAAGCAAGCATTCGTGCCCCATGTCGTCCTTCTTTCAGACAGGAAGT
GCACGCGGCTCCTGCCACTCCTTCTCCTCATCCCTTCACCCAACTCTTAA
ACGCGCTGCTGTCTCCCGCCCGCTCGACGAGGAGCTTGGTGACTCGTCAC
ATCAGCAAAACCAACAACAAGACACGATCCCTCAACAACTACCACCACAC
GGCACCACAACCATGGCTAGCGTCCATGTCGATGCCTTCCATGTCGCCTC
CCCCCCATGTTCTCCCCGTGGCGGGTTTGCGGGCGGAGGCCCTACCAGCC
CCCAAAAAATGAATGACCTGGTGGTGGAGGCGGAGCATCCCTCCTCTAGC
GTTACAGCCGCTTCGGTGATGATGCGAATGGCCAATTCCGATAGTGTCTC
CACCCCAGACGAGGCCCGGGCGGCCACTGCGGCTGCGGCTGCTGCACCTG
GCGCTGCCTCGGCTGTGGCAGCCTCTGTGGTGAAGGTCCCGACGCTGATG
GGGGCGAATGATGACGAGGACGCATTGGCGCATGTAGCGCGGGCGGCCAA
GGTGTATTGTCAGGGGGAACTGTTGCACATTGTCCAGACGGCCGGAATTT
TTGAAGACTCCAAAGAATTTGTGGACATGCCCATGAGGGTCGACCCTGAA
GTGGTCCTAGAGCAATTCCATGCTCTCGCTCCCTCCCTCCGTCGTGACCC
CACCGTCCTCAAAGCTTTCCTCGCGCAGTACTTCTCGGCCCCAGGCTCGG
ACCTAGTGCCGCACGTCCCTACTGATCACACCGACTCCCCACCCCTCCTC
GAGGGCCTAGCTGGTCATGCCCCATACCAGCGGTGGGCCAGTGACTTGAA
CGATTTCTGGAAGCAGCTCTGTCGCAAGGTCTCGCCTGATGTTGACCTGA
ACCCCCAACGCTACTCGATTTTGAAACGGACGCATCCGGTGGTTATCCCT
GGGGGGAGGTTCCGGGAGAGTTATTATTGGGACTCGTACTGGATCGTGCT
GGGGCTGTTGGCATGTGATATGAAGGAGACAGCAAGGGGGCTTGTCCAGA
ATTTGCTAGACGACGTGGCCAATTTTGGGTTTGTACCGAATGGGGGACGG
ATTTATTACTTGAATCGCAGCCAGCCCCCGCTGTTGTCAGAGATGGTCCT
TGCACTCGTGAAGCACGACCCGGCGGGGATCGATAAGCATTTCGTCTCGA
GCGCCCTAGCGGTGCTGGAGAAAGAGTATGAATTTTGGATGAACGACGGC
GAGAGGGCGATTACCTTCTCCTCCCTACCTTCTTCCATCGATGGAGATGC
GCATGGATCTTCCTCGCCTCCAACTCCATGCCGTAAGCACCAGCCTCACC
ACCCACAGCATGTACTGAATCGGTATTGGACTGCGTCGAATCATCCTCGG
CCCGAGTCTTTCAAGGAGGACCTCCATCACGCGGGCTTGGCTGATTGTGC
GCAGGGCTTCTACGCGAACATTGCTGCTGGTGCAGAGAGTGGATGGGATT
TTTCAAGCCGATGGATTGCACCTTGTGAGAAAGGAGAATACGCTCTTGAG
CGGATCGCGACAACGACGATTGTCCCCGTTGATTTGAACACATTTTTGTA
CCGGATGGAGCGGAATTTGGCTCGGTTGCATGACTTTGTTCTCACGCGCC
AGACCTCTCCTCCGACTGCTGCTGCCGGACGCACTGCCGCTACCATTCCC
TCGGATGCGCGTGAGTCGTGGGTCTCGTCCAAAGCGCAGATGTTCGCCGA
CGCTTCCACCCGTCGCGCCTTAGCCATGGACCACCTGCTTTGGGATAATC
ACAGGGGAATGTGGCGTGACCTGTGGGTATCATCCAATACCAATAGCAGC
AGCACATATAGCAGCAGTAGCCGCAGTGTGATCAATAGCACTGGTTGCAC
ATTTGCGTTTGAATTTGCGAAGGTCCTTCCGGCGAGCAACTTTTTGCCTC
TGTGGGGTCGCGTATTGGATAATCCTGCTTTGGCTTCTGTGGCGTCTAGT
CGGAAGCTGGCAGCGCTTGAGGGGCTGGGAATGAGTGGGTTGATTACTAA
GGGGGGGTTGCAGACCACCGATACGGAAACAAAAGAGCAGTGGGACGCTC
CGAATGCCTGGAGTCCGATTGTGCATATGATTATTGAGGGACTTGAGAAT
TTGCAGGCTGGGGATAGTGGGAGGTTGGCAATTTCGCTTGCGAAGGCGTG
GTTGGAAAGTAATTATCTGGGCTGGGCGAATACGGGGTATATGTACGAGA
AGTATAACGGTGGGGTGCCGGGGGCGAGGGGGGAGGGCGGGGAGTACTAT
CCGCAGGTGGGGTTTGGGTGGACGAATGGGGTGGTGTTGCATTTGTTGAA
GGTGTATGGGGGAAAGATAAGTGAGAAAAAATGAGCCAGAGATGTCTAAT
GCTTCTTCTTCTACGACGACCTCCTCTCCTTAGGTTTGGTGCGTGATGAG
ACACAAAATGGAAACGGGCGGGGGGGGGAGGGCGCTTTTGAAAAGAAAAG
GAGAGTGAGTGAGAAATCATTTTTTGGCAAATTGGAGTGCTGAGACAGAG
TGGGTATTTTAAGTATGTAGGGTGGGTATGAAGGGTTGTAGAAAGAATAT
AAAGGGTGGCCAGCCGAAGACAGCGGAAGGCAGCGACCTATCTCCTTCTT
TTTGAAAGGCTGGGCACCACATCCTTTGCAGAGTTTATTATTTATTATTG
AGATGAAAAAATTCGAGAAGAAGAACGTAGAAAGAGAAAAAAGGGGAATG
GAGAATAAAGGGTGGGAAATGAGGGGAAAAGAGAGAAATAGAAATAGGGA
GGAAACAAAGAATGGGAAATGTGAAAAGTGAGAGAGGAAATAACGACAAC
ATTAAACTGCTGTACAATGATGGTGCTTCACCAAAAGACAGTGGGAGCGA
AATTAAATATCCACGTAGAGGGTTTGAGACCTCTGCACAAAAGAAACTTT
TTACTGTATCCATCCATCTCCTCCCCGTTTCCATGTCCTACCACACGAAC
CCGTAACAGCAGATGCTTTCTATAAATCTTTCATAGGATTTGAGACATGT
GTTTATACAGGCGCAGTGTTAGAGTCATTTAGCCACAAGCGAGCCGATCT
CCTTATTTTGTTCTTTCAAGTTATGATCCTAGGATTCGTGAGTCGAGTCG
AATCGAACGACTGACGGCATGCGAGGTATGTAGCGTGTGTGTGGCCGACG
CGGCAGCCGGCCAAGAGACCTGAACGAGGGGGGGAAGCTCACACTGCGCC
CGCCTTTATGGGTAGGGCGTTCTTTCCGCAGGTCTTGAACGACGAGAAAA
GAAAATCGTCTCGTGAACAAGGGAGAGAACAGGTGTAATAAGGGTATCAA
TAGGGGCACGCACGAGAGTGAGGAAAAGTGACCGGAATACGAAGCTACAC
GAAAAGTGATGTTTTTTAACACACAGAAAAAAGCAAATGGATACTCAAAG
GATAAATGAAAAGTGGTAATATTGAATCACATCAGAG

protein sequence of NO21G01580.1

>NO21G01580.1-protein ID=NO21G01580.1-protein|Name=NO21G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=822bp
MMRWTRGPAAFVLALNTRQYRGATTFFFASKHSCPMSSFFQTGSARGSCH
SFSSSLHPTLKRAAVSRPLDEELGDSSHQQNQQQDTIPQQLPPHGTTTMA
SVHVDAFHVASPPCSPRGGFAGGGPTSPQKMNDLVVEAEHPSSSVTAASV
MMRMANSDSVSTPDEARAATAAAAAAPGAASAVAASVVKVPTLMGANDDE
DALAHVARAAKVYCQGELLHIVQTAGIFEDSKEFVDMPMRVDPEVVLEQF
HALAPSLRRDPTVLKAFLAQYFSAPGSDLVPHVPTDHTDSPPLLEGLAGH
APYQRWASDLNDFWKQLCRKVSPDVDLNPQRYSILKRTHPVVIPGGRFRE
SYYWDSYWIVLGLLACDMKETARGLVQNLLDDVANFGFVPNGGRIYYLNR
SQPPLLSEMVLALVKHDPAGIDKHFVSSALAVLEKEYEFWMNDGERAITF
SSLPSSIDGDAHGSSSPPTPCRKHQPHHPQHVLNRYWTASNHPRPESFKE
DLHHAGLADCAQGFYANIAAGAESGWDFSSRWIAPCEKGEYALERIATTT
IVPVDLNTFLYRMERNLARLHDFVLTRQTSPPTAAAGRTAATIPSDARES
WVSSKAQMFADASTRRALAMDHLLWDNHRGMWRDLWVSSNTNSSSTYSSS
SRSVINSTGCTFAFEFAKVLPASNFLPLWGRVLDNPALASVASSRKLAAL
EGLGMSGLITKGGLQTTDTETKEQWDAPNAWSPIVHMIIEGLENLQAGDS
GRLAISLAKAWLESNYLGWANTGYMYEKYNGGVPGARGEGGEYYPQVGFG
WTNGVVLHLLKVYGGKISEKK*

mRNA from alignment at chr21:466859..470886-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G01580.1 ID=NO21G01580.1|Name=NO21G01580.1|organism=Nannochloropsis oceanica|type=mRNA|length=4028bp|location=Sequence derived from alignment at chr21:466859..470886- (Nannochloropsis oceanica)
AACAGATGAAGTAAATTAATGATGCGCTGGACCAGAGGACCAGCGGCTTT
CGTGCTTGCGCTCAACACAAGACAGTACAGAGGAGCTACCACCTTCTTCT
TTGCAAGCAAGCATTCGTGCCCCATGTCGTCCTTCTTTCAGGTAAGGATA
ATCTATGGGAAGGAGAGGCACGGATCTGTGGAGGCCTTAAGTCATGTGGA
AGTGTTCGCGCTCGCTCGGGTCCCGTGTGCACAAGGCGGGAGGCGTACTC
CTTCATGCGAAATCGTGTGGGCGGGATATCTCACCGCTAAAAGATGTCTC
GGCGTGCGTGGATGGTTCTAGGCGAGTGTAGACACGTCAGCGGTGTCAAG
CTGCTACTCGTAAACCTCCCCATCGCTTCTTCGTTTTGCGAGCTCCCCGC
CCGGCATCGCACATGACCTTTCTCACGGCGTTGTATCTGTTTCTTCCTTG
TTTGGGTGCCTTATACGCCTAAGGAGTGTCACCCCCCGCTCTCCAACTTG
AAGCCATGGCCCCTGCACATCCGCTCCATTCGTCTCACACCATCACCAAC
ATCCCATCAACACCTACATACACTTCACACAGACAGGAAGTGCACGCGGC
TCCTGCCACTCCTTCTCCTCATCCCTTCACCCAACTCTTAAACGCGCTGC
TGTCTCCCGCCCGCTCGACGAGGAGCTTGGTGACTCGTCACATCAGCAAA
ACCAACAACAAGACACGATCCCTCAACAACTACCACCACACGGCACCACA
ACCATGGCTAGCGTCCATGTCGATGCCTTCCATGTCGCCTCCCCCCCATG
TTCTCCCCGTGGCGGGTTTGCGGGCGGAGGCCCTACCAGCCCCCAAAAAA
TGAATGACCTGGTGGTGGAGGCGGAGCATCCCTCCTCTAGCGTTACAGCC
GCTTCGGTGATGATGCGAATGGCCAATTCCGATAGTGTCTCCACCCCAGA
CGAGGCCCGGGCGGCCACTGCGGCTGCGGCTGCTGCACCTGGCGCTGCCT
CGGCTGTGGCAGCCTCTGTGGTGAAGGTCCCGACGCTGATGGGGGCGAAT
GATGACGAGGACGCATTGGCGCATGTAGCGCGGGCGGCCAAGGTGTATTG
TCAGGGGGAACTGTTGCACATTGTCCAGACGGCCGGAATTTTTGAAGACT
CCAAAGAATTTGTGGACATGCCCATGAGGGTCGACCCTGAAGTGGTCCTA
GAGCAATTCCATGCTCTCGCTCCCTCCCTCCGTCGTGACCCCACCGTCCT
CAAAGCTTTCCTCGCGCAGTACTTCTCGGCCCCAGGCTCGGACCTAGTGC
CGCACGTCCCTACTGATCACACCGACTCCCCACCCCTCCTCGAGGGCCTA
GCTGGTCATGCCCCATACCAGCGGTGGGCCAGTGACTTGAACGATTTCTG
GAAGCAGCTCTGTCGCAAGGTCTCGCCTGATGTTGACCTGAACCCCCAAC
GCTACTCGATTTTGAAACGGACGCATCCGGTGGTTATCCCTGGGGGGAGG
TTCCGGGAGAGTTATTATTGGGACTCGTACTGGATCGTGCTGGGGCTGTT
GGCATGTGATATGAAGGAGACAGCAAGGGGGCTTGTCCAGAATTTGCTAG
ACGACGTGGCCAATTTTGGGTTTGTACCGAATGGGGGACGGATTTATTAC
TTGAATCGCAGCCAGCCCCCGCTGTTGTCAGAGATGGTCCTTGCACTCGT
GAAGCACGACCCGGCGGGGATCGATAAGCATTTCGTCTCGAGCGCCCTAG
CGGTGCTGGAGAAAGAGTATGAATTTTGGATGAACGACGGCGAGAGGGCG
ATTACCTTCTCCTCCCTACCTTCTTCCATCGATGGAGATGCGCATGGATC
TTCCTCGCCTCCAACTCCATGCCGTAAGCACCAGCCTCACCACCCACAGC
ATGTACTGAATCGGTATTGGACTGCGTCGAATCATCCTCGGCCCGAGTCT
TTCAAGGAGGACCTCCATCACGCGGGCTTGGCTGATTGTGCGCAGGGCTT
CTACGCGAACATTGCTGCTGGTGCAGAGAGTGGATGGGATTTTTCAAGCC
GATGGATTGCACCTTGTGAGAAAGGAGAATACGCTCTTGAGCGGATCGCG
ACAACGACGATTGTCCCCGTTGATTTGAACACATTTTTGTACCGGATGGA
GCGGAATTTGGCTCGGTTGCATGACTTTGTTCTCACGCGCCAGACCTCTC
CTCCGACTGCTGCTGCCGGACGCACTGCCGCTACCATTCCCTCGGATGCG
CGTGAGTCGTGGGTCTCGTCCAAAGCGCAGATGTTCGCCGACGCTTCCAC
CCGTCGCGCCTTAGCCATGGACCACCTGCTTTGGGATAATCACAGGGGAA
TGTGGCGTGACCTGTGGGTATCATCCAATACCAATAGCAGCAGCACATAT
AGCAGCAGTAGCCGCAGTGTGATCAATAGCACTGGTTGCACATTTGCGTT
TGAATTTGCGAAGGTCCTTCCGGCGAGCAACTTTTTGCCTCTGTGGGGTC
GCGTATTGGATAATCCTGCTTTGGCTTCTGTGGCGTCTAGTCGGAAGCTG
GCAGCGCTTGAGGGGCTGGGAATGAGTGGGTTGATTACTAAGGGGGGGTT
GCAGACCACCGATACGGAAACAAAAGAGCAGTGGGACGCTCCGAATGCCT
GGAGTCCGATTGTGCATATGATTATTGAGGGACTTGAGAATTTGCAGGCT
GGGGATAGTGGGAGGTTGGCAATTTCGCTTGCGAAGGCGTGGTTGGAAAG
TAATTATCTGGGCTGGGCGAATACGGGGTATATGTACGAGAAGTATAACG
GTGGGGTGCCGGGGGCGAGGGGGGAGGGCGGGGAGTACTATCCGCAGGTG
GGGTTTGGGTGGACGAATGGGGTGGTGTTGCATTTGTTGAAGGTGTATGG
GGGAAAGATAAGTGAGAAAAAATGAGCCAGAGATGTCTAATGCTTCTTCT
TCTACGACGACCTCCTCTCCTTAGGTTTGGTGCGTGATGAGACACAAAAT
GGAAACGGGCGGGGGGGGGAGGGCGCTTTTGAAAAGAAAAGGAGAGTGAG
TGAGAAATCATTTTTTGGCAAATTGGAGTGCTGAGACAGAGTGGGTATTT
TAAGTATGTAGGGTGGGTATGAAGGGTTGTAGAAAGAATATAAAGGGTGG
CCAGCCGAAGACAGCGGAAGGCAGCGACCTATCTCCTTCTTTTTGAAAGG
CTGGGCACCACATCCTTTGCAGAGTTTATTATTTATTATTGAGATGAAAA
AATTCGAGAAGAAGAACGTAGAAAGAGAAAAAAGGGGAATGGAGAATAAA
GGGTGGGAAATGAGGGGAAAAGAGAGAAATAGAAATAGGGAGGAAACAAA
GAATGGGAAATGTGAAAAGTGAGAGAGGAAATAACGACAACATTAAACTG
CTGTACAATGATGGTGCTTCACCAAAAGACAGTGGGAGCGAAATTAAATA
TCCACGTAGAGGGTTTGAGACCTCTGCACAAAAGAAACTTTTTACTGTAT
CCATCCATCTCCTCCCCGTTTCCATGTCCTACCACACGAACCCGTAACAG
CAGATGCTTTCTATAAATCTTTCATAGGATTTGAGACATGTGTTTATACA
GGCGCAGTGTTAGAGTCATTTAGCCACAAGCGAGCCGATCTCCTTATTTT
GTTCTTTCAAGTTATGATCCTAGGATTCGTGAGTCGAGTCGAATCGAACG
ACTGACGGCATGCGAGGTATGTAGCGTGTGTGTGGCCGACGCGGCAGCCG
GCCAAGAGACCTGAACGAGGGGGGGAAGCTCACACTGCGCCCGCCTTTAT
GGGTAGGGCGTTCTTTCCGCAGGTCTTGAACGACGAGAAAAGAAAATCGT
CTCGTGAACAAGGGAGAGAACAGGTGTAATAAGGGTATCAATAGGGGCAC
GCACGAGAGTGAGGAAAAGTGACCGGAATACGAAGCTACACGAAAAGTGA
TGTTTTTTAACACACAGAAAAAAGCAAATGGATACTCAAAGGATAAATGA
AAAGTGGTAATATTGAATCACATCAGAG

Coding sequence (CDS) from alignment at chr21:466859..470886-

>NO21G01580.1 ID=NO21G01580.1|Name=NO21G01580.1|organism=Nannochloropsis oceanica|type=CDS|length=2466bp|location=Sequence derived from alignment at chr21:466859..470886- (Nannochloropsis oceanica)
ATGATGCGCTGGACCAGAGGACCAGCGGCTTTCGTGCTTGCGCTCAACAC
AAGACAGTACAGAGGAGCTACCACCTTCTTCTTTGCAAGCAAGCATTCGT
GCCCCATGTCGTCCTTCTTTCAGACAGGAAGTGCACGCGGCTCCTGCCAC
TCCTTCTCCTCATCCCTTCACCCAACTCTTAAACGCGCTGCTGTCTCCCG
CCCGCTCGACGAGGAGCTTGGTGACTCGTCACATCAGCAAAACCAACAAC
AAGACACGATCCCTCAACAACTACCACCACACGGCACCACAACCATGGCT
AGCGTCCATGTCGATGCCTTCCATGTCGCCTCCCCCCCATGTTCTCCCCG
TGGCGGGTTTGCGGGCGGAGGCCCTACCAGCCCCCAAAAAATGAATGACC
TGGTGGTGGAGGCGGAGCATCCCTCCTCTAGCGTTACAGCCGCTTCGGTG
ATGATGCGAATGGCCAATTCCGATAGTGTCTCCACCCCAGACGAGGCCCG
GGCGGCCACTGCGGCTGCGGCTGCTGCACCTGGCGCTGCCTCGGCTGTGG
CAGCCTCTGTGGTGAAGGTCCCGACGCTGATGGGGGCGAATGATGACGAG
GACGCATTGGCGCATGTAGCGCGGGCGGCCAAGGTGTATTGTCAGGGGGA
ACTGTTGCACATTGTCCAGACGGCCGGAATTTTTGAAGACTCCAAAGAAT
TTGTGGACATGCCCATGAGGGTCGACCCTGAAGTGGTCCTAGAGCAATTC
CATGCTCTCGCTCCCTCCCTCCGTCGTGACCCCACCGTCCTCAAAGCTTT
CCTCGCGCAGTACTTCTCGGCCCCAGGCTCGGACCTAGTGCCGCACGTCC
CTACTGATCACACCGACTCCCCACCCCTCCTCGAGGGCCTAGCTGGTCAT
GCCCCATACCAGCGGTGGGCCAGTGACTTGAACGATTTCTGGAAGCAGCT
CTGTCGCAAGGTCTCGCCTGATGTTGACCTGAACCCCCAACGCTACTCGA
TTTTGAAACGGACGCATCCGGTGGTTATCCCTGGGGGGAGGTTCCGGGAG
AGTTATTATTGGGACTCGTACTGGATCGTGCTGGGGCTGTTGGCATGTGA
TATGAAGGAGACAGCAAGGGGGCTTGTCCAGAATTTGCTAGACGACGTGG
CCAATTTTGGGTTTGTACCGAATGGGGGACGGATTTATTACTTGAATCGC
AGCCAGCCCCCGCTGTTGTCAGAGATGGTCCTTGCACTCGTGAAGCACGA
CCCGGCGGGGATCGATAAGCATTTCGTCTCGAGCGCCCTAGCGGTGCTGG
AGAAAGAGTATGAATTTTGGATGAACGACGGCGAGAGGGCGATTACCTTC
TCCTCCCTACCTTCTTCCATCGATGGAGATGCGCATGGATCTTCCTCGCC
TCCAACTCCATGCCGTAAGCACCAGCCTCACCACCCACAGCATGTACTGA
ATCGGTATTGGACTGCGTCGAATCATCCTCGGCCCGAGTCTTTCAAGGAG
GACCTCCATCACGCGGGCTTGGCTGATTGTGCGCAGGGCTTCTACGCGAA
CATTGCTGCTGGTGCAGAGAGTGGATGGGATTTTTCAAGCCGATGGATTG
CACCTTGTGAGAAAGGAGAATACGCTCTTGAGCGGATCGCGACAACGACG
ATTGTCCCCGTTGATTTGAACACATTTTTGTACCGGATGGAGCGGAATTT
GGCTCGGTTGCATGACTTTGTTCTCACGCGCCAGACCTCTCCTCCGACTG
CTGCTGCCGGACGCACTGCCGCTACCATTCCCTCGGATGCGCGTGAGTCG
TGGGTCTCGTCCAAAGCGCAGATGTTCGCCGACGCTTCCACCCGTCGCGC
CTTAGCCATGGACCACCTGCTTTGGGATAATCACAGGGGAATGTGGCGTG
ACCTGTGGGTATCATCCAATACCAATAGCAGCAGCACATATAGCAGCAGT
AGCCGCAGTGTGATCAATAGCACTGGTTGCACATTTGCGTTTGAATTTGC
GAAGGTCCTTCCGGCGAGCAACTTTTTGCCTCTGTGGGGTCGCGTATTGG
ATAATCCTGCTTTGGCTTCTGTGGCGTCTAGTCGGAAGCTGGCAGCGCTT
GAGGGGCTGGGAATGAGTGGGTTGATTACTAAGGGGGGGTTGCAGACCAC
CGATACGGAAACAAAAGAGCAGTGGGACGCTCCGAATGCCTGGAGTCCGA
TTGTGCATATGATTATTGAGGGACTTGAGAATTTGCAGGCTGGGGATAGT
GGGAGGTTGGCAATTTCGCTTGCGAAGGCGTGGTTGGAAAGTAATTATCT
GGGCTGGGCGAATACGGGGTATATGTACGAGAAGTATAACGGTGGGGTGC
CGGGGGCGAGGGGGGAGGGCGGGGAGTACTATCCGCAGGTGGGGTTTGGG
TGGACGAATGGGGTGGTGTTGCATTTGTTGAAGGTGTATGGGGGAAAGAT
AAGTGAGAAAAAATGA

Synonyms

Publications