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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr21 | genome | chr21:396316..398881 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO21G01320.1 vs.
Match: EWM22658.1 (fizzy-related protein [Nannochloropsis gaditana]) HSP 1 Score: 809.7 bits (2090), Expect = 7.400e-231 Identity = 463/732 (63.25%), Postives = 535/732 (73.09%), Query Frame = 0
Query: 5 AERIASSESGDNMNIDNSDSLPSPRTPNRPTSKGNP-FLSPSSSFMGDSSSFSMLCGSPSSSFLTRQWSNGTPPGSPSTSKLHYEYQSRIKSPVKRRMSLEQQMANDASSPKRTHSPLALSRSLSDGLVYGDRFIPARNAPQMEIAYSLMNEEIDNAGSNHASSPFRGPAGVISTRPSTDSFSASPSVSVAASSSVLASSSSSLSLFPDLPLTGGASATGSTATAATTSPPDSRSTSPSALSGAGDVGPERQPILNMLLRSELLGVDLHHPYSRPSSSAFSGGKHHLNDDRAGGGGLPSGAADGRGSDSSSSSINGIDG---------TGSSSSIGRPAG---GEGGPGSLQRSSSSSSSSSPNLLQFKPARECHSEEVHRSFSLLPMGPAQRRLLSTPFKAKRKVSKVPFKVLDAPALQDDFYLNLVDWSSLNVLAVGLGTCVYLWSACTSSVTKLCDLGEDDSVTSVAWTQRGTHLAVGTNTGEVQMWDVGRCQRIRSLSGHSARIGTMSWNGQVLASGSRDRLIYLRDVRAREPRVKKLQGHRQEVCGLRWSFDDCQLASGGNDNKLYIWTLHSSQPVQKFTEHTAAVKALAWSPHQGGLLASGGGTADRHIRFWNTLTGASLSRVDTGSQVCNLMWSKNVNEIVSTHGYSLNQIILWRYPSMTKVTTLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWNVFPGAKSRGGEGSRLGTNFLFPVGHDIR 724
A+ IAS+E GD +D S PRTPNRP K +LSPSSSF S++S GSPSSS L +QWS TPP SPS KL EYQSRI SP KRR LE++M+ +ASS K ++SPL+L RSLSDGL GDRFIP R QMEIAYS+M E++ A S ASSPFRGP ST S+ SFSA P SVA SSS L SS+S + GAS +T ++ + S +SP+A + D +R+PILN++LRSELLG+D P PS+ + +++D G G + + D + +S SIGR AG G GG SS S SP LLQFKPARE ++ H SFSLLPM RRLLS+P KAKRKVSK PFKVLDAPALQDDFYLNLVDWSS+NVLAVGLGTCVYLWSACTS+VTKLCDLG +D+V+SVAW +G+HLAVGT+TGEVQ+WDV RCQ++RSL GHSAR+GTMSWNGQ+LA+GSRDRLI +RD+RAREPR+KKL GHRQEVCGLRWSFD+C LASGGNDNKLY+W HSSQP+QKF HTAAVKALAWSPHQ GLLASGGGTADRHIRFWNTLTG ++S VDTGSQVCNLMWS+NVNEIVSTHGYSLNQIILW+YPSM KV TLTGHTFRVLYLA+SPDGQTIVTGAGDETLRFWN FPGAK+ G+ LGT+ LFPVGHDIR
Sbjct: 4 AKAIASTEVGDTGVMDVEGS---PRTPNRPRRKNKSMYLSPSSSF---GSNYSSSEGSPSSS-LVKQWSK-TPPTSPS--KLRSEYQSRINSPSKRRTYLERRMSIEASSFKSSNSPLSLRRSLSDGLTNGDRFIPLRVGAQMEIAYSMMGEDV--AASPQASSPFRGPERAHSTLHSSSSFSALPRTSVATSSSHLFSSTSFSYETTIAAMDTGASNPATTNGTSSPTVRSSSFSSPAAGGTSSDAVSDREPILNLILRSELLGMDSGPPALHPSAGEVYR-RERMSEDGGGSGSRRDSFREEERKEEEEEEEEEYDSRRTTTHMAMSMASHSIGRSAGVKIGSGGVSRYSNGSSGGSPGSPGLLQFKPARERPQQDPHSSFSLLPMETTHRRLLSSPLKAKRKVSKTPFKVLDAPALQDDFYLNLVDWSSMNVLAVGLGTCVYLWSACTSTVTKLCDLGGEDAVSSVAWAPQGSHLAVGTSTGEVQVWDVDRCQQLRSLGGHSARVGTMSWNGQLLATGSRDRLICMRDLRAREPRIKKLHGHRQEVCGLRWSFDECHLASGGNDNKLYVWNQHSSQPIQKFAAHTAAVKALAWSPHQSGLLASGGGTADRHIRFWNTLTGKAMSEVDTGSQVCNLMWSRNVNEIVSTHGYSLNQIILWKYPSMAKVATLTGHTFRVLYLAMSPDGQTIVTGAGDETLRFWNAFPGAKN---TGNSLGTSLLFPVGHDIR 719
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO21G01320.1 ID=NO21G01320.1|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=mRNA|length=2296bp
CACAGGAAAGTATGTCGTCCACGGCAGAAAGAATTGCGAGCTCAGAGTCG
GGGGACAACATGAACATAGACAACAGCGATAGCTTGCCCTCGCCTCGCAC
GCCCAATCGGCCCACAAGCAAAGGCAATCCCTTCTTGTCGCCGTCAAGTA
GCTTTATGGGCGACAGCAGCAGCTTTTCCATGCTTTGTGGATCTCCTTCG
TCTTCATTTTTGACAAGGCAATGGTCCAACGGGACCCCGCCAGGTTCTCC
TAGTACGAGCAAGCTTCACTACGAATATCAGTCAAGAATAAAAAGCCCAG
TGAAACGCCGCATGTCTCTAGAACAACAAATGGCCAACGACGCCTCTTCC
CCTAAACGGACCCACTCCCCCCTCGCACTCAGTCGCAGCCTGTCCGACGG
CCTCGTGTACGGAGATCGATTCATCCCCGCCCGGAACGCCCCCCAAATGG
AGATTGCTTACTCATTGATGAACGAAGAAATTGACAATGCGGGATCGAAT
CATGCCTCCTCCCCCTTTCGAGGACCCGCGGGCGTGATTTCAACGCGGCC
ATCCACCGACTCTTTTTCTGCTTCACCGTCCGTCTCAGTAGCAGCGTCAT
CATCAGTCCTCGCTTCCTCCTCCTCCTCGTTGTCTCTATTCCCAGACTTA
CCCTTGACTGGGGGGGCATCGGCTACAGGGTCAACAGCGACTGCAGCGAC
AACTTCGCCGCCTGACAGCAGGAGCACCAGTCCATCTGCGCTATCCGGTG
CCGGCGACGTTGGCCCCGAGCGTCAACCCATTCTAAACATGCTTTTACGT
AGCGAGCTCTTGGGCGTGGACCTTCACCATCCCTACTCCCGCCCTTCCTC
TTCCGCCTTCTCTGGAGGCAAACACCACCTCAACGATGATCGCGCAGGAG
GGGGAGGGTTACCTAGCGGCGCTGCGGACGGCAGAGGAAGCGACAGCAGT
AGCAGCAGCATAAATGGCATAGATGGCACTGGCAGTAGTAGTAGCATCGG
TAGACCGGCTGGAGGAGAAGGAGGACCGGGAAGCTTGCAGCGCAGCAGCA
GCAGCAGCAGCAGCAGCAGTCCCAATCTCCTTCAATTCAAACCGGCCCGT
GAATGTCACTCGGAAGAGGTCCATCGTTCCTTTTCCCTCCTTCCCATGGG
GCCTGCTCAACGCCGCCTTCTCTCCACCCCTTTCAAGGCCAAGCGTAAAG
TGAGCAAGGTCCCGTTCAAGGTGCTCGACGCCCCTGCACTGCAAGATGAT
TTTTATCTCAACCTCGTTGACTGGTCGTCGCTTAATGTCCTCGCCGTCGG
CCTGGGCACATGTGTCTATCTCTGGAGTGCTTGTACAAGCTCTGTTACGA
AACTCTGCGATCTAGGAGAGGATGATTCCGTGACATCCGTCGCGTGGACG
CAGCGAGGAACGCACTTGGCAGTAGGCACCAATACGGGAGAGGTCCAAAT
GTGGGATGTTGGGAGATGTCAGCGGATTAGGAGCTTGTCCGGTCATTCCG
CAAGGATAGGAACCATGTCGTGGAATGGCCAAGTGCTGGCAAGCGGGAGT
CGCGATCGCTTGATTTATTTGAGGGATGTCCGAGCACGGGAACCAAGAGT
GAAGAAATTGCAGGGGCATAGACAGGAAGTATGTGGGTTGAGATGGTCAT
TTGACGACTGCCAGCTTGCTTCCGGGGGAAATGACAACAAGCTTTATATA
TGGACTTTGCATTCTTCCCAGCCTGTGCAGAAGTTCACGGAGCACACAGC
AGCGGTAAAGGCTTTGGCATGGTCTCCGCATCAGGGGGGGTTGCTTGCGA
GTGGGGGCGGAACGGCGGATAGACATATAAGGTTTTGGAATACCTTAACT
GGGGCATCTCTAAGTCGGGTGGACACTGGCTCGCAGGTATGTAATTTGAT
GTGGAGCAAAAATGTGAACGAGATTGTGAGTACGCATGGGTACAGTTTGA
ATCAGATTATTTTGTGGCGGTACCCGAGTATGACGAAGGTGACCACTTTG
ACGGGGCATACTTTTCGAGTGCTGTACCTGGCGATTTCTCCCGATGGACA
GACGATTGTGACAGGTGCGGGGGATGAAACGTTGAGGTTTTGGAATGTGT
TTCCTGGGGCGAAGAGCAGGGGGGGGGAGGGGTCGAGGTTGGGAACGAAT
TTTTTGTTTCCTGTGGGGCATGACATTCGGTAGAGCTGGACAGGGGTAGA
AGAAGCAGGAGGTGGTGGAAGAAGCGTGGGAGGGGCGTTGATTGGAGAAG
AGGAAGGGAAGGAAAATGACACATGCAAATTATTCGCAAGCGAGTT back to topprotein sequence of NO21G01320.1 >NO21G01320.1-protein ID=NO21G01320.1-protein|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=724bp
MSSTAERIASSESGDNMNIDNSDSLPSPRTPNRPTSKGNPFLSPSSSFMG
DSSSFSMLCGSPSSSFLTRQWSNGTPPGSPSTSKLHYEYQSRIKSPVKRR
MSLEQQMANDASSPKRTHSPLALSRSLSDGLVYGDRFIPARNAPQMEIAY
SLMNEEIDNAGSNHASSPFRGPAGVISTRPSTDSFSASPSVSVAASSSVL
ASSSSSLSLFPDLPLTGGASATGSTATAATTSPPDSRSTSPSALSGAGDV
GPERQPILNMLLRSELLGVDLHHPYSRPSSSAFSGGKHHLNDDRAGGGGL
PSGAADGRGSDSSSSSINGIDGTGSSSSIGRPAGGEGGPGSLQRSSSSSS
SSSPNLLQFKPARECHSEEVHRSFSLLPMGPAQRRLLSTPFKAKRKVSKV
PFKVLDAPALQDDFYLNLVDWSSLNVLAVGLGTCVYLWSACTSSVTKLCD
LGEDDSVTSVAWTQRGTHLAVGTNTGEVQMWDVGRCQRIRSLSGHSARIG
TMSWNGQVLASGSRDRLIYLRDVRAREPRVKKLQGHRQEVCGLRWSFDDC
QLASGGNDNKLYIWTLHSSQPVQKFTEHTAAVKALAWSPHQGGLLASGGG
TADRHIRFWNTLTGASLSRVDTGSQVCNLMWSKNVNEIVSTHGYSLNQII
LWRYPSMTKVTTLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWNVFPGA
KSRGGEGSRLGTNFLFPVGHDIR* back to topmRNA from alignment at chr21:396316..398881- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO21G01320.1 ID=NO21G01320.1|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=mRNA|length=2566bp|location=Sequence derived from alignment at chr21:396316..398881- (Nannochloropsis oceanica)
CACAGGAAAGTATGTCGTCCACGGCAGAAAGAATTGCGAGCTCAGAGTCG
GGGGACAACATGAACATAGACAACAGCGATAGCTTGCCCTCGCCTCGCAC
GCCCAATCGGCCCACAAGCAAAGGCAATCCCTTCTTGTCGCCGTCAAGTA
GCTTTATGGGCGACAGCAGCAGCTTTTCCATGCTTTGTGGATCTCCTTCG
TCTTCATTTTTGACAAGGCAATGGTCCAACGGGACCCCGCCAGGTTCTCC
TAGTACGAGCAAGCTTCACTACGAATATCAGGTACGTTGGTGAGTGTGTG
CTGTCTGCTGCATGGGTTGGATTGGATACACATGCCTTCATGGCTTTATG
ACAACCTCACCTTTGACCATGGATTAAACACAGTCAAGAATAAAAAGCCC
AGTGAAACGCCGCATGTCTCTAGAACAACAAATGGCCAACGACGCCTCTT
CCCCTAAACGGACCCACTCCCCCCTCGCACTCAGTCGCAGCCTGTCCGAC
GGCCTCGTGTACGGAGATCGATTCATCCCCGCCCGGAACGCCCCCCAAAT
GGAGATTGCTTACTCATTGATGAACGAAGAAATTGACAATGCGGGATCGA
ATCATGCCTCCTCCCCCTTTCGAGGACCCGCGGGCGTGATTTCAACGCGG
CCATCCACCGACTCTTTTTCTGCTTCACCGTCCGTCTCAGTAGCAGCGTC
ATCATCAGTCCTCGCTTCCTCCTCCTCCTCGTTGTCTCTATTCCCAGACT
TACCCTTGACTGGGGGGGCATCGGCTACAGGGTCAACAGCGACTGCAGCG
ACAACTTCGCCGCCTGACAGCAGGAGCACCAGTCCATCTGCGCTATGTGA
GTGTCTTTATTTTATTTTATTTCCTTTTCTTTCTGGCTCTCACGTACATA
CTTGTTGGCTGTACAACCCGCCCACCGATAGGTCAACCCGTCCTTTTCCT
CCCCTTCTTCCTTCTATACACTCATTGTCCCATATATCTCAACCCTCCCC
CCCAAACAAAACAGCCGGTGCCGGCGACGTTGGCCCCGAGCGTCAACCCA
TTCTAAACATGCTTTTACGTAGCGAGCTCTTGGGCGTGGACCTTCACCAT
CCCTACTCCCGCCCTTCCTCTTCCGCCTTCTCTGGAGGCAAACACCACCT
CAACGATGATCGCGCAGGAGGGGGAGGGTTACCTAGCGGCGCTGCGGACG
GCAGAGGAAGCGACAGCAGTAGCAGCAGCATAAATGGCATAGATGGCACT
GGCAGTAGTAGTAGCATCGGTAGACCGGCTGGAGGAGAAGGAGGACCGGG
AAGCTTGCAGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCCCAATCTCC
TTCAATTCAAACCGGCCCGTGAATGTCACTCGGAAGAGGTCCATCGTTCC
TTTTCCCTCCTTCCCATGGGGCCTGCTCAACGCCGCCTTCTCTCCACCCC
TTTCAAGGCCAAGCGTAAAGTGAGCAAGGTCCCGTTCAAGGTGCTCGACG
CCCCTGCACTGCAAGATGATTTTTATCTCAACCTCGTTGACTGGTCGTCG
CTTAATGTCCTCGCCGTCGGCCTGGGCACATGTGTCTATCTCTGGAGTGC
TTGTACAAGCTCTGTTACGAAACTCTGCGATCTAGGAGAGGATGATTCCG
TGACATCCGTCGCGTGGACGCAGCGAGGAACGCACTTGGCAGTAGGCACC
AATACGGGAGAGGTCCAAATGTGGGATGTTGGGAGATGTCAGCGGATTAG
GAGCTTGTCCGGTCATTCCGCAAGGATAGGAACCATGTCGTGGAATGGCC
AAGTGCTGGCAAGCGGGAGTCGCGATCGCTTGATTTATTTGAGGGATGTC
CGAGCACGGGAACCAAGAGTGAAGAAATTGCAGGGGCATAGACAGGAAGT
ATGTGGGTTGAGATGGTCATTTGACGACTGCCAGCTTGCTTCCGGGGGAA
ATGACAACAAGCTTTATATATGGACTTTGCATTCTTCCCAGCCTGTGCAG
AAGTTCACGGAGCACACAGCAGCGGTAAAGGCTTTGGCATGGTCTCCGCA
TCAGGGGGGGTTGCTTGCGAGTGGGGGCGGAACGGCGGATAGACATATAA
GGTTTTGGAATACCTTAACTGGGGCATCTCTAAGTCGGGTGGACACTGGC
TCGCAGGTATGTAATTTGATGTGGAGCAAAAATGTGAACGAGATTGTGAG
TACGCATGGGTACAGTTTGAATCAGATTATTTTGTGGCGGTACCCGAGTA
TGACGAAGGTGACCACTTTGACGGGGCATACTTTTCGAGTGCTGTACCTG
GCGATTTCTCCCGATGGACAGACGATTGTGACAGGTGCGGGGGATGAAAC
GTTGAGGTTTTGGAATGTGTTTCCTGGGGCGAAGAGCAGGGGGGGGGAGG
GGTCGAGGTTGGGAACGAATTTTTTGTTTCCTGTGGGGCATGACATTCGG
TAGAGCTGGACAGGGGTAGAAGAAGCAGGAGGTGGTGGAAGAAGCGTGGG
AGGGGCGTTGATTGGAGAAGAGGAAGGGAAGGAAAATGACACATGCAAAT
TATTCGCAAGCGAGTT back to topCoding sequence (CDS) from alignment at chr21:396316..398881- >NO21G01320.1 ID=NO21G01320.1|Name=NO21G01320.1|organism=Nannochloropsis oceanica|type=CDS|length=2172bp|location=Sequence derived from alignment at chr21:396316..398881- (Nannochloropsis oceanica)
ATGTCGTCCACGGCAGAAAGAATTGCGAGCTCAGAGTCGGGGGACAACAT
GAACATAGACAACAGCGATAGCTTGCCCTCGCCTCGCACGCCCAATCGGC
CCACAAGCAAAGGCAATCCCTTCTTGTCGCCGTCAAGTAGCTTTATGGGC
GACAGCAGCAGCTTTTCCATGCTTTGTGGATCTCCTTCGTCTTCATTTTT
GACAAGGCAATGGTCCAACGGGACCCCGCCAGGTTCTCCTAGTACGAGCA
AGCTTCACTACGAATATCAGTCAAGAATAAAAAGCCCAGTGAAACGCCGC
ATGTCTCTAGAACAACAAATGGCCAACGACGCCTCTTCCCCTAAACGGAC
CCACTCCCCCCTCGCACTCAGTCGCAGCCTGTCCGACGGCCTCGTGTACG
GAGATCGATTCATCCCCGCCCGGAACGCCCCCCAAATGGAGATTGCTTAC
TCATTGATGAACGAAGAAATTGACAATGCGGGATCGAATCATGCCTCCTC
CCCCTTTCGAGGACCCGCGGGCGTGATTTCAACGCGGCCATCCACCGACT
CTTTTTCTGCTTCACCGTCCGTCTCAGTAGCAGCGTCATCATCAGTCCTC
GCTTCCTCCTCCTCCTCGTTGTCTCTATTCCCAGACTTACCCTTGACTGG
GGGGGCATCGGCTACAGGGTCAACAGCGACTGCAGCGACAACTTCGCCGC
CTGACAGCAGGAGCACCAGTCCATCTGCGCTATCCGGTGCCGGCGACGTT
GGCCCCGAGCGTCAACCCATTCTAAACATGCTTTTACGTAGCGAGCTCTT
GGGCGTGGACCTTCACCATCCCTACTCCCGCCCTTCCTCTTCCGCCTTCT
CTGGAGGCAAACACCACCTCAACGATGATCGCGCAGGAGGGGGAGGGTTA
CCTAGCGGCGCTGCGGACGGCAGAGGAAGCGACAGCAGTAGCAGCAGCAT
AAATGGCATAGATGGCACTGGCAGTAGTAGTAGCATCGGTAGACCGGCTG
GAGGAGAAGGAGGACCGGGAAGCTTGCAGCGCAGCAGCAGCAGCAGCAGC
AGCAGCAGTCCCAATCTCCTTCAATTCAAACCGGCCCGTGAATGTCACTC
GGAAGAGGTCCATCGTTCCTTTTCCCTCCTTCCCATGGGGCCTGCTCAAC
GCCGCCTTCTCTCCACCCCTTTCAAGGCCAAGCGTAAAGTGAGCAAGGTC
CCGTTCAAGGTGCTCGACGCCCCTGCACTGCAAGATGATTTTTATCTCAA
CCTCGTTGACTGGTCGTCGCTTAATGTCCTCGCCGTCGGCCTGGGCACAT
GTGTCTATCTCTGGAGTGCTTGTACAAGCTCTGTTACGAAACTCTGCGAT
CTAGGAGAGGATGATTCCGTGACATCCGTCGCGTGGACGCAGCGAGGAAC
GCACTTGGCAGTAGGCACCAATACGGGAGAGGTCCAAATGTGGGATGTTG
GGAGATGTCAGCGGATTAGGAGCTTGTCCGGTCATTCCGCAAGGATAGGA
ACCATGTCGTGGAATGGCCAAGTGCTGGCAAGCGGGAGTCGCGATCGCTT
GATTTATTTGAGGGATGTCCGAGCACGGGAACCAAGAGTGAAGAAATTGC
AGGGGCATAGACAGGAAGTATGTGGGTTGAGATGGTCATTTGACGACTGC
CAGCTTGCTTCCGGGGGAAATGACAACAAGCTTTATATATGGACTTTGCA
TTCTTCCCAGCCTGTGCAGAAGTTCACGGAGCACACAGCAGCGGTAAAGG
CTTTGGCATGGTCTCCGCATCAGGGGGGGTTGCTTGCGAGTGGGGGCGGA
ACGGCGGATAGACATATAAGGTTTTGGAATACCTTAACTGGGGCATCTCT
AAGTCGGGTGGACACTGGCTCGCAGGTATGTAATTTGATGTGGAGCAAAA
ATGTGAACGAGATTGTGAGTACGCATGGGTACAGTTTGAATCAGATTATT
TTGTGGCGGTACCCGAGTATGACGAAGGTGACCACTTTGACGGGGCATAC
TTTTCGAGTGCTGTACCTGGCGATTTCTCCCGATGGACAGACGATTGTGA
CAGGTGCGGGGGATGAAACGTTGAGGTTTTGGAATGTGTTTCCTGGGGCG
AAGAGCAGGGGGGGGGAGGGGTCGAGGTTGGGAACGAATTTTTTGTTTCC
TGTGGGGCATGACATTCGGTAG back to top
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