NO21G01090.1, NO21G01090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO21G01090.1
Unique NameNO21G01090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length330
Alignment locationchr21:342361..342853 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr21genomechr21:342361..342853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO21G01090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01090NO21G01090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO21G01090.1NO21G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO21G01090.1.cds1NO21G01090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO21G01090.1.cds2NO21G01090.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO21G01090.1 ID=NO21G01090.1|Name=NO21G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=330bp
ATGCTTTTGCTCCTCGTGCGACGTGCCTTACCTCGACTCTATCCCGGCAG
CGCTGGGACAGCCCGAGCCGTAAGTACCTGTAAACCACTGCCGAAGCACC
AACAACAACATTCTAAGAAGAAGCTCCCTCCGTTTTTCTCCGACCCCGCC
ACTTATCCTCTCATTGCAATCGTGGGCTCGGCAGTGACAATGGCCACGGG
GTTTTTGGTCTACAAATCTGTAAAATCTCCGGATGTACGCTTGCGCAAAA
TAGAACGCGCTCGCGTGAGTCGAAAGCTACAGCGCAGTAACCAGGTGCCG
GGCTTTGACATGCCATTTGAAAAAGCTTAG
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protein sequence of NO21G01090.1

>NO21G01090.1-protein ID=NO21G01090.1-protein|Name=NO21G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=110bp
MLLLLVRRALPRLYPGSAGTARAVSTCKPLPKHQQQHSKKKLPPFFSDPA
TYPLIAIVGSAVTMATGFLVYKSVKSPDVRLRKIERARVSRKLQRSNQVP
GFDMPFEKA*
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mRNA from alignment at chr21:342361..342853-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO21G01090.1 ID=NO21G01090.1|Name=NO21G01090.1|organism=Nannochloropsis oceanica|type=mRNA|length=493bp|location=Sequence derived from alignment at chr21:342361..342853- (Nannochloropsis oceanica)
ATGCTTTTGCTCCTCGTGCGACGTGCCTTACCTCGACTCTATCCCGGCAG
CGCTGGGACAGCCCGAGCCGTAAGTACCTGTAAACCACTGCCGAAGCACC
AACAACAACATTCTAAGAAGAAGCTCCCTCCGTTTTTCTCCGACCCCGCC
ACTTATCCTCTCATTGCAATCGTGGGCTCGGTACGTCTTTGACTGGTGGG
TGGGTGAATGCTGCCCGCACCGCACAGCCAGTGAGGTACCTCCTTCGCAC
CAAGCTCCAATCTTTATTCTTATTGGAATGCATGATATCTCCTTAGTGGT
CTCAACTTTCGCCCCATTCCTCCCCTTCCTCACGGATACACAGGCAGTGA
CAATGGCCACGGGGTTTTTGGTCTACAAATCTGTAAAATCTCCGGATGTA
CGCTTGCGCAAAATAGAACGCGCTCGCGTGAGTCGAAAGCTACAGCGCAG
TAACCAGGTGCCGGGCTTTGACATGCCATTTGAAAAAGCTTAG
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Coding sequence (CDS) from alignment at chr21:342361..342853-

>NO21G01090.1 ID=NO21G01090.1|Name=NO21G01090.1|organism=Nannochloropsis oceanica|type=CDS|length=330bp|location=Sequence derived from alignment at chr21:342361..342853- (Nannochloropsis oceanica)
ATGCTTTTGCTCCTCGTGCGACGTGCCTTACCTCGACTCTATCCCGGCAG
CGCTGGGACAGCCCGAGCCGTAAGTACCTGTAAACCACTGCCGAAGCACC
AACAACAACATTCTAAGAAGAAGCTCCCTCCGTTTTTCTCCGACCCCGCC
ACTTATCCTCTCATTGCAATCGTGGGCTCGGCAGTGACAATGGCCACGGG
GTTTTTGGTCTACAAATCTGTAAAATCTCCGGATGTACGCTTGCGCAAAA
TAGAACGCGCTCGCGTGAGTCGAAAGCTACAGCGCAGTAACCAGGTGCCG
GGCTTTGACATGCCATTTGAAAAAGCTTAG
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Synonyms
Publications