NO21G00080.3, NO21G00080.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G00080.3
Unique Name	NO21G00080.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4270
Alignment location	chr21:22236..28411 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:22236..28411 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G00080.3 vs.
Match: XP_005855616.1 (DNA topoisomerase III [Nannochloropsis gaditana CCMP526]; EKU20747.1 DNA topoisomerase III [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1112.4 bits (2876), Expect = 0.000e+0
Identity = 532/610 (87.21%), Postives = 573/610 (93.93%), Query Frame = 0

Query:   35 MVAEKPSICNSIAHALCGGAELSTRGRSPPVHEFHGRFEGQAARIRVTSVTGHVFSTDFPGQYSNWEAVDPVDLFRAPTCKEPTSKFITHHLASEGKGADVLVLWLDCDREGENICFEVIDCMQQGFKSHTRILRAHFSAITPKDIQHALQNLGVPNKNEALSVDARQELDLKVGVAFSRFQTRYFQGKYGDLDSTLVSYGPCQTPTLGFCVQRHDNIQSFTPEKFWYVAATIVKDGVSVPLEWNRGRLFDQEVAHVFLHLVGEAGTVTVDKVLKSEQRRTKPSAMNTVEMLKEASKVLGMGPAQTMSIAERLYLSGYLSYPRTESTAYPESFDVRGSLALQTSHPIWGDYAKGLLEEGVARPRAGLDAGDHPPITPVRALDSTEFPGDMGRLYELVTRHFLATLSHDARFLQTKVLLSSTSGENFTVAGKIMIDPGYLAVLLQSKDENKLPDFREGERFSFASLALRDGQTAPPGYLTESELIEKMEKHGIGTDASISSHINNIVERNYVHIGDGRTLIPNP-------LGIVLVHGYLRIDADLVLPKVRAQIESECTLIAKGLADMQSVVDHSLKNFEAKFRYFAEHIDLMDSLFEATFSPLVSVGR 638
            MVAEKPSICN+IA+ALC GAE+STRGRSPPVHEFHGRFEGQ+ARIRVTSVTGHVFSTDFPGQYSNWEAVDPVDLF+APT KEPTSKFITHHLASEGKGAD+LVLWLDCDREGENICFEVI+CMQ GFK+HTRILRAHFSAITPKDI  ALQ LGVPNK+EALSVDARQELDLKVGVAFSRFQTRYFQGKYGDLD+TLVSYGPCQTPTLGFCVQRHD IQSF+PEKFWY+AA + KDG +V LEW RGR+FD EVAHVFLHLVGEAG+V VDKV KSEQRRTKP+A+NTVE+LKEASKVLGMGPAQTMS+AERLYLSGYLSYPRTESTAYPESFDVRG+L+LQ SHP WGDYAKGLL+EGV+RPRAG+DAGDHPPITPVRALD TEFPGDMGRLY+LVTRHFLA+LSHDARFLQTKVL SS  GE+F+ +GKIMIDPGYLAVL QSKDE+KLPDF+EG+ F+F+SL L DG T+PPGYLTESELIE+MEKHGIGTDASISSHINNIVERNYVH+GDGRTLIPNP       LGIVLVHGYLRIDADLVLPKVRAQIESECTLIAKG ADMQSVVDHSL+NFEAKFRYFAEHIDLMDSLFEATFSPL + G+
Sbjct:    1 MVAEKPSICNAIANALCAGAEMSTRGRSPPVHEFHGRFEGQSARIRVTSVTGHVFSTDFPGQYSNWEAVDPVDLFKAPTRKEPTSKFITHHLASEGKGADILVLWLDCDREGENICFEVIECMQPGFKAHTRILRAHFSAITPKDIHRALQKLGVPNKDEALSVDARQELDLKVGVAFSRFQTRYFQGKYGDLDATLVSYGPCQTPTLGFCVQRHDEIQSFSPEKFWYLAAAVAKDGANVALEWGRGRVFDHEVAHVFLHLVGEAGSVAVDKVQKSEQRRTKPTALNTVELLKEASKVLGMGPAQTMSVAERLYLSGYLSYPRTESTAYPESFDVRGALSLQVSHPTWGDYAKGLLQEGVSRPRAGVDAGDHPPITPVRALDPTEFPGDMGRLYDLVTRHFLASLSHDARFLQTKVLFSSECGESFSASGKIMIDPGYLAVLAQSKDESKLPDFQEGDHFTFSSLGLGDGHTSPPGYLTESELIERMEKHGIGTDASISSHINNIVERNYVHVGDGRTLIPNPLGDCGNILGIVLVHGYLRIDADLVLPKVRAQIESECTLIAKGQADMQSVVDHSLRNFEAKFRYFAEHIDLMDSLFEATFSPLAATGK 610

The following BLAST results are available for this feature:

BLAST of NO21G00080.3 vs.

BLAST of NO21G00080.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005855616.1	0.000e+0	87.21	DNA topoisomerase III [Nannochloropsis gaditana CC...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G00080	NO21G00080	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00080.3	NO21G00080.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00080.3.cds1	NO21G00080.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds2	NO21G00080.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds3	NO21G00080.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds4	NO21G00080.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds5	NO21G00080.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds6	NO21G00080.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds7	NO21G00080.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds8	NO21G00080.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds9	NO21G00080.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00080.3.cds10	NO21G00080.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:22236..28411-
coding sequence from alignment at chr21:22236..28411-

mRNA sequence

>NO21G00080.3 ID=NO21G00080.3|Name=NO21G00080.3|organism=Nannochloropsis oceanica|type=mRNA|length=4270bp
TCCTCCATACGGTCCAGGACATTAATTTGATCCTTCTCAACGAACCACAG
CTAACCCTCCAGCTCCTGTAAGTGGAAAGGACTGAGGGTGGGAGGTGTCT
CAGTGTACTATTCATGCCGCCTCAAGCCATGCAGAGAGACGTTCCTTCAG
GTTTCAGTCTCTGCTTTCTTTCAAACCAATGCCTGCTCCCCTCCCTTCTT
CCCTTCCTGCCGCGCTGTCACCGACGTACCGCCTCATCCTCCGCCTTGAC
TTTGTGCAGCTCGCAGACAACAAAGGCCGTGGACACCACGGGAACTACTT
CCAAAGTCTTTTGGCAGGTGAAGGTGTGAAGGTGGGGGGGAATGTGGGCC
ATGAGCAATGGATATGATCTCTGGCCATGTCGATAAAGATTTGCCTCTCA
GAGAAGTAAGTTGGATCAAAGGACGGATAAATAAGCAAGGCGTACACACA
AAAATGCATATATCTATGTAATACTGTTATGTTGTACCCCAAGGCCACCT
CTCCCGCTGAACCGACACACATACCTGCTCTGTCCGCCACGGTGTTCCTA
AGAAAGGCGCGACCTTGAGGGGATGGAAGGCCACGTCGTGCGGAGAGCTG
AGAGAGGGCCCCTGAAAGGGTGTGTTTTTAAGGAGTGGAATTGAAATAGA
GGAGGGCCAATCTCAAAGTGGGAGGCAGAAGCAGAACGACGAGACGGTAT
TACTGCCACTTACCTGAGACAAGGACGACGGCAATGGCGGTAAAGCACTA
ATGCTCACTTTGTAGACCAGCCCAACGACCGCTACGATGGCCAAGAGGAC
GAGAAGACGAGCGCGAGGGCTGGTGGTGCTAACCCGGCGTGGCACGGAGT
GGTGATGATGGGCTTGAGGAGCAATCATAGGCATGATTGTCTTAAATTGG
ACTCAAGAGCGGGCCAGTTTGCTCGATCACTGACAAGCGTTTCCCTGTGC
TTTATTTTAATCCGTGAGTTCGAATGTGGTGGATGGCTTTTTTTTTGTGT
AAAAAAATGTGGGGGGTAGAATGACCGGTGAAGCGATAAGCGATGCATGG
CCGCCGCGGCATATCATTCCCACGGACGGGACTAATTTATCCTAACTTAG
TAGGTTAACTCATTTGGTTTCGCAGTGCCAATTATATGGCACGGTATGAT
GATCCCATACACGGTTAATAATTTGTGCCGTGACCCTTGGGCTGCTGGAT
CACAATGCATCTCCTTCCCATTTTCATCCCCATCCTCTCAGCGACAGATA
AGGAGTACCACACTGTGCTTCCACGAATGGCGGGCGGCGGCGGCAAGCTC
GTGGTGATGGTGGCTGAGAAGCCCAGTATTTGCAATTCCATCGCTCATGC
GCTGTGCGGTGGGGCGGAACTGAGCACACGTGGACGTTCGCCACCTGTGC
ATGAGTTTCACGGGCGCTTCGAAGGGCAGGCGGCGCGCATCCGCGTCACG
TCGGTCACTGGTCACGTATTTTCTACAGATTTTCCGGGTCAATATAGCAA
TTGGGAAGCGGTGGACCCCGTCGACTTATTTCGTGCTCCAACATGCAAAG
AGCCGACCAGCAAATTCATAACGCACCACCTGGCTTCGGAGGGCAAAGGG
GCAGATGTCCTCGTCTTGTGGCTAGATTGCGATCGCGAGGGAGAGAATAT
CTGCTTTGAGGTCATTGACTGCATGCAACAAGGCTTCAAATCTCATACAC
GCATCCTCCGCGCACATTTCTCCGCCATTACCCCTAAAGACATCCAACAC
GCCCTGCAGAATCTAGGAGTGCCCAACAAGAACGAAGCCCTCTCAGTAGA
TGCACGGCAAGAGCTGGACCTCAAAGTTGGCGTAGCATTCTCCCGCTTTC
AGACTCGTTACTTTCAGGGCAAGTACGGGGACCTCGACTCGACCCTAGTT
TCTTACGGACCCTGTCAGACGCCCACGCTCGGATTCTGCGTTCAGCGTCA
TGACAATATCCAATCATTTACTCCCGAGAAGTTTTGGTATGTGGCCGCGA
CCATCGTCAAGGATGGCGTGAGCGTGCCGCTCGAATGGAACCGAGGCCGC
CTGTTCGACCAAGAAGTGGCCCACGTCTTCCTGCACCTGGTGGGAGAGGC
GGGTACAGTCACAGTAGATAAGGTTCTAAAGTCCGAGCAGCGTCGCACGA
AGCCCTCTGCCATGAATACTGTCGAAATGCTCAAGGAGGCATCGAAAGTT
CTGGGTATGGGGCCTGCTCAGACCATGTCCATCGCCGAGAGGCTTTACTT
GTCGGGCTACCTGTCCTACCCCCGCACCGAGTCCACTGCCTATCCCGAGA
GCTTTGACGTGCGAGGTTCGCTGGCCTTGCAAACGTCTCACCCCATCTGG
GGCGACTATGCCAAGGGCCTTTTAGAAGAGGGGGTGGCACGACCCCGCGC
AGGACTAGACGCAGGCGATCATCCGCCCATTACCCCTGTCCGTGCTTTGG
ATTCGACGGAGTTTCCGGGTGATATGGGACGGCTCTATGAGCTGGTTACT
CGTCACTTCCTTGCAACTCTATCCCATGACGCGCGCTTCCTCCAGACCAA
GGTCCTGCTATCCTCGACGAGCGGGGAGAATTTCACTGTTGCCGGCAAAA
TTATGATTGACCCGGGCTACCTCGCGGTATTGTTGCAGTCCAAGGACGAG
AACAAGTTGCCAGATTTTCGAGAAGGAGAGCGCTTTAGCTTTGCTTCGCT
AGCCCTTCGTGACGGGCAGACAGCCCCGCCAGGCTACCTGACTGAGAGCG
AGTTAATTGAGAAGATGGAAAAGCATGGCATCGGCACCGACGCCTCCATA
TCCTCACATATCAACAACATTGTTGAACGCAACTACGTGCACATTGGTGA
CGGTCGTACCCTTATTCCCAACCCTTTGGGCATCGTGCTTGTCCATGGCT
ATCTGAGAATAGACGCGGACCTTGTCCTGCCCAAGGTGCGGGCACAGATC
GAGAGCGAGTGCACACTTATCGCCAAGGGACTGGCGGACATGCAGAGCGT
GGTGGATCATTCGCTAAAGAACTTTGAAGCCAAGTTTCGGTACTTTGCCG
AGCATATCGATCTGATGGACTCCCTGTTTGAAGCAACTTTCAGCCCGCTG
GTTAGTGTAGGAAGGAGACAGATAGTAAGGGAAATATGGAAGAAATAGGA
AAGACGAAAGGCATTACATCTACTCTCTTTCTTCATCACCCATTTAATCA
GGCGGCTACGGGCAAGCCCTTGTCCAAGTGTGGGAAGTGCAAGCGCTTCA
TGAAGTACATCCACCTCAAGCCTCAGCGATTGCACTGCCCAACCTGCAAC
GAGACATATGCGCTACCACAGGTAAGTCTCGACGAAATGAGAAAAGTGCT
GAAGAGCAGATTACGAAAAATCCATGTCACTTATTTCCAATATATTCCGG
AAACAGAACGGCACGATCAAACTCTACAAGGAACTCAAGTGCCCTTTGGA
CGACTTTGAGCTCCTCCTCTTTTCTCTAGGTAAGAAAGGGGAAAGAGGAA
ATTAGAGGGGGCTGAGGTTACACTCTGCTCACACATGTGCATCGCTTGCA
GGGAATTCGGAGCGCGCCCAGGGCAAGTCATTCACCCTCTGCCCGTACTG
CTACTCCCATCCGCCATTCGAAGGTAAGCAGCAAGGCGAAAGAAATTGTC
TATATTCTTCTCCTAGTTTCATCAATCGCCTCCAACTCATTCCCTCTTCC
TCTTAAGGGCTAAATATTATGGGTTGCGACTCATGCATGCACCCGACGTG
CAAGCACTCCCTCACACGGAATGGGGTCTGCCCTTGTCCTGGCGAGAGTG
GGGCGACCTGCCCAGGCACGCTGGTTCTGGACATAAATTCCCGCCCTAAT
TGGAAGATGTCTTGCAACCGCTGCAATAACCTGGTCCTATTCAAGGGCGT
CAACATTCACAACATCAAGCCACTCGCGGGCCAGTACTGCGATGCCTGCG
GCTCGGCCATCCTCGCGGTGGATTTTCACAAAGACAAGACGCCCTTGCCT
GGCGGCGAGACCAAGGTTGAAGGGTGCGTACTCTGTCACGATCTCCTGAA
TGGCTGCACCGAGCTGGCAAAAGGGCGACACAAACACGTCGCCGTCGCGC
GGCAAGATTTTGCGAAGCGTAATCGGGGACGGGGCGGGCGAGGACGCGGA
CGCGGGAGGGGGCGTGGGGGAAAGAGTGGAGTCAATCCGCTTATGTCTTT
TGAGGACTTTTAGGCTTTGGCAACCAGAAAAGGAGGGGCAAAGCGAGGAA
CAAAAAAAGAGTAATAAGCT

protein sequence of NO21G00080.3

>NO21G00080.3-protein ID=NO21G00080.3-protein|Name=NO21G00080.3|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MHLLPIFIPILSATDKEYHTVLPRMAGGGGKLVVMVAEKPSICNSIAHAL
CGGAELSTRGRSPPVHEFHGRFEGQAARIRVTSVTGHVFSTDFPGQYSNW
EAVDPVDLFRAPTCKEPTSKFITHHLASEGKGADVLVLWLDCDREGENIC
FEVIDCMQQGFKSHTRILRAHFSAITPKDIQHALQNLGVPNKNEALSVDA
RQELDLKVGVAFSRFQTRYFQGKYGDLDSTLVSYGPCQTPTLGFCVQRHD
NIQSFTPEKFWYVAATIVKDGVSVPLEWNRGRLFDQEVAHVFLHLVGEAG
TVTVDKVLKSEQRRTKPSAMNTVEMLKEASKVLGMGPAQTMSIAERLYLS
GYLSYPRTESTAYPESFDVRGSLALQTSHPIWGDYAKGLLEEGVARPRAG
LDAGDHPPITPVRALDSTEFPGDMGRLYELVTRHFLATLSHDARFLQTKV
LLSSTSGENFTVAGKIMIDPGYLAVLLQSKDENKLPDFREGERFSFASLA
LRDGQTAPPGYLTESELIEKMEKHGIGTDASISSHINNIVERNYVHIGDG
RTLIPNPLGIVLVHGYLRIDADLVLPKVRAQIESECTLIAKGLADMQSVV
DHSLKNFEAKFRYFAEHIDLMDSLFEATFSPLVSVGRRQIVREIWKK*

mRNA from alignment at chr21:22236..28411-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G00080.3 ID=NO21G00080.3|Name=NO21G00080.3|organism=Nannochloropsis oceanica|type=mRNA|length=6176bp|location=Sequence derived from alignment at chr21:22236..28411- (Nannochloropsis oceanica)
TCCTCCATACGGTCCAGGACATTAATTTGATCCTTCTCAACGAACCACAG
CTAACCCTCCAGCTCCTGTAAGTGGAAAGGACTGAGGGTGGGAGGTGTCT
CAGTGTACTATTCATGCCGCCTCAAGCCATGCAGAGAGACGTTCCTTCAG
GTTTCAGTCTCTGCTTTCTTTCAAACCAATGCCTGCTCCCCTCCCTTCTT
CCCTTCCTGCCGCGCTGTCACCGACGTACCGCCTCATCCTCCGCCTTGAC
TTTGTGCAGCTCGCAGACAACAAAGGCCGTGGACACCACGGGAACTACTT
CCAAAGTCTTTTGGCAGGTGAAGGTGTGAAGGTGGGGGGGAATGTGGGCC
ATGAGCAATGGATATGATCTCTGGCCATGTCGATAAAGATTTGCCTCTCA
GAGAAGTAAGTTGGATCAAAGGACGGATAAATAAGCAAGGCGTACACACA
AAAATGCATATATCTATGTAATACTGTTATGTTGTACCCCAAGGCCACCT
CTCCCGCTGAACCGACACACATACCTGCTCTGTCCGCCACGGTGTTCCTA
AGAAAGGCGCGACCTTGAGGGGATGGAAGGCCACGTCGTGCGGAGAGCTG
AGAGAGGGCCCCTGAAAGGGTGTGTTTTTAAGGAGTGGAATTGAAATAGA
GGAGGGCCAATCTCAAAGTGGGAGGCAGAAGCAGAACGACGAGACGGTAT
TACTGCCACTTACCTGAGACAAGGACGACGGCAATGGCGGTAAAGCACTA
ATGCTCACTTTGTAGACCAGCCCAACGACCGCTACGATGGCCAAGAGGAC
GAGAAGACGAGCGCGAGGGCTGGTGGTGCTAACCCGGCGTGGCACGGAGT
GGTGATGATGGGCTTGAGGAGCAATCATAGGCATGATTGTCTTAAATTGG
ACTCAAGAGCGGGCCAGTTTGCTCGATCACTGACAAGCGTTTCCCTGTGC
TTTATTTTAATCCGTGAGTTCGAATGTGGTGGATGGCTTTTTTTTTGTGT
AAAAAAATGTGGGGGGTAGAATGACCGGTGAAGCGATAAGCGATGCATGG
CCGCCGCGGCATATCATTCCCACGGACGGGACTAATTTATCCTAACTTAG
TAGGTTAACTCATTTGGTTTCGCAGTGCCAATTATATGGCACGGTATGAT
GATCCCATACACGGTTAATAATTTGTGCCGTGACCCTTGGGCTGCTGGAT
CACAATGCATCTCCTTCCCATTTTCATCCCCATCCTCTCAGCGACAGATA
AGGAGTACCACACTGTGCTTCCACGAATGGCGGGCGGCGGCGGCAAGCTC
GTGGTGATGGTGGCTGAGAAGCCCAGTATTTGCAATTCCATCGCTCATGC
GCTGTGCGGTGGGGCGGAACTGAGCACACGTGGTACGTCGAAGGGAAACA
TGGGGAGAAGTTGCTGGAGAGGAGGTTATTTCCAACAAAATGATGCAATC
TTTTCAATATTATAGGCTATCAAGGTTTCTGGTTGTACAAGTCTCTACCT
TATACTCTGTCTTCGTCATGGTATCTCTATTTTTAAAGGCATTCCCTTTC
CCTTTTCATCCTACACCACAGGACGTTCGCCACCTGTGCATGAGTTTCAC
GGGCGCTTCGAAGGGCAGGCGGCGCGCATCCGCGTCACGTCGGTCACTGG
TCACGTATTTTCTACAGATTTTCCGGGTCAATATAGCAATTGGGAAGCGG
TGGACCCCGTCGACTTATTTCGTGCTCCAACATGCAAAGAGCCGACCAGC
AAATTCATAACGCACCACCTGGCTTCGGAGGGCAAAGGGGCAGATGTCCT
CGTCTTGTGGCTAGATTGCGATCGCGAGGGAGAGAATATCTGCTTTGAGG
TCATTGACTGCATGCAACAAGGCTTCAAATCTCATACACGCATCCTCCGG
TGAGTTTATGGGTGGCGGTGGCGTATAGGGCCAAGGGAAATGGAGTGCTT
GTCTGGGCGCTAAGTCTATTGTGAGCTGCGTAATTCACAAAGCTTAATGA
CGTTCATTCATTTCTCACCTATCATATTTCGCAGCGCACATTTCTCCGCC
ATTACCCCTAAAGACATCCAACACGCCCTGCAGAATCTAGGAGTGCCCAA
CAAGAACGAAGCCCTCTCAGTAGATGCACGGTGAGTGTCAGGAATGGGGC
AGGTAGGGAACCATCAACTATTACATTCGGCCTTGCACGTTCTCACATCT
CTATCACATTGCCAGATTGAGCACCACTGAAGTTATATTTTTCATAAATT
CATTAAATGACAGGCAAGAGCTGGACCTCAAAGTTGGCGTAGCATTCTCC
CGCTTTCAGACTCGTTACTTTCAGGGCAAGTACGGGGACCTCGACTCGAC
CCTAGTTTCTTACGGACCCTGTCAGACGCCCACGCTCGGATTCTGCGTTC
AGCGTCATGACAATATCCAATCATTTACTCCCGAGAAGTTTTGGTATGTG
GCCGCGACCATCGTCAAGGATGGCGTGAGCGTGCCGCTCGAATGGGTAAG
TCACGGAGTGGAAAGTGTGCCAATTGAGCCTATCGAACAAGTGGGATATT
TCTCTGTGAACCTGTGATATATGTGATGTTCTCTCTTTTATGCTGCGCGA
GTCTCTCGTTTCATCCTCAACTTTTTTCCAACAACTGATTCGTGAGTTTC
TGCGGGGCGGGCTTATTTTGGTGCTCAAAATATGATAGAAGGAGATGTCT
TTATGTCGGTGGCAAAGCGCCTAAAGGCGAATAAACCCCTAAAAAATAAA
AACAATAAAAAACTTAAATAACTTTCTGTATAGTCCGTAAGTGCCGCAAA
CAGCGATTGGGGGGCCGTAACGGCGCTTTGTCGCAGTTGCATACGGTGAA
TCGACGCGATATATCCTCAGTCAAGACGGCGGCATCACATGGATCCGTCC
CACGCTTCTAGCATCCAACAGTCGGAACAGCGTCACAGAATGCTTTGAAT
AAGCTAAAATACGTACGAATCCCTTCTTCCTTACAACGTGACAGAACCGA
GGCCGCCTGTTCGACCAAGAAGTGGCCCACGTCTTCCTGCACCTGGTGGG
AGAGGCGGGTACAGTCACAGTAGATAAGGTTCTAAAGTCCGAGCAGCGTC
GCACGAAGCCCTCTGCCATGAATACTGTCGAAATGCTCAAGGAGGCATCG
AAAGTTCTGGGTATGGGGCCTGCTCAGACCATGTCCATCGCCGAGAGGCT
TTACTTGTCGGGCTACCTGTCCTACCCCCGGTATGTTGTTATTCATATTA
CCTCTTTGGAGCGACGTTTGGAAAATGTAGATTCAGGCTCTCATCGTCTT
CAATGTCCCTCACACGCACAGCACCGAGTCCACTGCCTATCCCGAGAGCT
TTGACGTGCGAGGTTCGCTGGCCTTGCAAACGTCTCACCCCATCTGGGGC
GACTATGCCAAGGGCCTTTTAGAAGAGGGGGTGGCACGACCCCGCGCAGG
ACTAGACGCAGGCGATCATCCGCCCATTACCCCTGTCCGTGCTTTGGATT
CGACGGTGAGCTCGTGATTTTGGGATATTTGAGTTTCTGGTTTGCTCAGG
AGAAGTGCCCTCTCACCACCATTATAAATCACACTCGAAATTCACAAATC
CAGGAGTTTCCGGGTGATATGGGACGGCTCTATGAGCTGGTTACTCGTCA
CTTCCTTGCAACTCTATCCCATGACGCGCGCTTCCTCCAGACCAAGGTCC
TGCTATCCTCGACGAGCGGGGAGAATTTCACTGTTGCCGGCAAAATTATG
ATTGACCCGGGCTACCTCGCGGTATTGTTGCAGTCCAAGGTGAGGAAATG
GGAGGATTATTGTGCATCAAAGTCTGGGAGAAAAGTGGCGAGCGCATACC
GTTGCTTTAATTGAACTGATAACATGATGCAAATGCTCAGTGCCTACTGA
CTGTCTTAAAATATACGTAGGACGAGAACAAGTTGCCAGATTTTCGAGAA
GGAGAGCGCTTTAGCTTTGCTTCGCTAGCCCTTCGTGACGGGCAGACAGC
CCCGCCAGGCTACCTGACTGAGAGCGAGTTAATTGAGAAGATGGAAAAGC
ATGGCATCGGCACCGACGCCTCCATATCCTCACATATCAACAACATTGTT
GAACGCAACTACGTGCACATTGGTGACGGTCGTACCCTTATTCCCAACCC
TTTGGGTGAGTAATGATGAGAAGAAAAAATGAGAGGGCGGGGGACTTGGA
GAGTGACTTAGCCATACGCACCCACAACGCTCGAGATCGTTTCTTAACTT
GTAATATGTACACTACAGGCATCGTGCTTGTCCATGGCTATCTGAGAATA
GACGCGGACCTTGTCCTGCCCAAGGTGCGGGCACAGATCGAGAGCGAGTG
CACACTTATCGCCAAGGGACTGGTAAGTGTTATGGAGGAAAAAGATAATT
GAATGACAATAAATCCTTTTGCAAATTTCGTGGTTGCGCAAAGATTTCCG
TAACCGAAATCTGATCCATCTTCTCCAACCATTCAATTCATCACTGACTG
CCTTCCTGCGGTCCTTACCCCACCATATGCACTCAAAAGGCGGACATGCA
GAGCGTGGTGGATCATTCGCTAAAGAACTTTGAAGCCAAGTTTCGGTACT
TTGCCGAGCATATCGATCTGATGGACTCCCTGTTTGAAGCAACTTTCAGC
CCGCTGGTTAGTGTAGGAAGGAGACAGATAGTAAGGGAAATATGGAAGAA
ATAGGAAAGACGAAAGGCATTACATCTACTCTCTTTCTTCATCACCCATT
TAATCAGGCGGCTACGGGCAAGCCCTTGTCCAAGTGTGGGAAGTGCAAGC
GCTTCATGAAGTACATCCACCTCAAGCCTCAGCGATTGCACTGCCCAACC
TGCAACGAGACATATGCGCTACCACAGGTAAGTCTCGACGAAATGAGAAA
AGTGCTGAAGAGCAGATTACGAAAAATCCATGTCACTTATTTCCAATATA
TTCCGGAAACAGAACGGCACGATCAAACTCTACAAGGAACTCAAGTGCCC
TTTGGACGACTTTGAGCTCCTCCTCTTTTCTCTAGGTAAGAAAGGGGAAA
GAGGAAATTAGAGGGGGCTGAGGTTACACTCTGCTCACACATGTGCATCG
CTTGCAGGGAATTCGGAGCGCGCCCAGGGCAAGTCATTCACCCTCTGCCC
GTACTGCTACTCCCATCCGCCATTCGAAGGTAAGCAGCAAGGCGAAAGAA
ATTGTCTATATTCTTCTCCTAGTTTCATCAATCGCCTCCAACTCATTCCC
TCTTCCTCTTAAGGGCTAAATATTATGGGTTGCGACTCATGCATGCACCC
GACGTGCAAGCACTCCCTCACACGGAATGGGGTCTGCCCTTGTCCTGGCG
AGAGTGGGGCGACCTGCCCAGGCACGCTGGTTCTGGACATAAATTCCCGC
CCTAATTGGAAGATGTCTTGCAACCGCTGCAATAACCTGGTCCTATTCAA
GGTAAGATGGAAGGAAGGAATGGGAAGGATAGGAGAGAGCGGCCAGGGTT
TCAATGGCTTTTTGCATGGCACCTGCTGTTGTATGGTTGTCAAGTCTTTA
CATTCTCTCCCCTCCTCTCTCCCTGGCTTCCTTCTTCAATTTTTAGGGCG
TCAACATTCACAACATCAAGCCACTCGCGGGCCAGTACTGCGATGCCTGC
GGCTCGGCCATCCTCGCGGTGGATTTTCACAAAGACAAGACGCCCTTGCC
TGGTAAGTCAAATAGGCATTCAAAGCGCTGCCAATGAGCGTCGGATTGCA
TTAAACCTTTTCATATGCAGCTAAATTTTTCGCATTTACCCCTTGATAAG
TCATATGACCGTGAATGCCATCCTGTTTGTCATCCTTTTTTCTCCATTCC
CCCCCCCCTCTCTCTCCGCCTCTCTCTTTGAATTCTTTTTCGATTCTCTT
TTTGCAGGCGGCGAGACCAAGGTTGAAGGGTGCGTACTCTGTCACGATCT
CCTGAATGGCTGCACCGAGCTGGCAAAAGGGCGACACAAACACGTCGCCG
TCGCGCGGCAAGATTTTGCGAAGCGTAATCGGGGACGGGGCGGGCGAGGA
CGCGGACGCGGGAGGGGGCGTGGGGGAAAGAGTGGAGTCAATCCGCTTAT
GTCTTTTGAGGACTTTTAGGCTTTGGCAACCAGAAAAGGAGGGGCAAAGC
GAGGAACAAAAAAAGAGTAATAAGCT

Coding sequence (CDS) from alignment at chr21:22236..28411-

>NO21G00080.3 ID=NO21G00080.3|Name=NO21G00080.3|organism=Nannochloropsis oceanica|type=CDS|length=1944bp|location=Sequence derived from alignment at chr21:22236..28411- (Nannochloropsis oceanica)
ATGCATCTCCTTCCCATTTTCATCCCCATCCTCTCAGCGACAGATAAGGA
GTACCACACTGTGCTTCCACGAATGGCGGGCGGCGGCGGCAAGCTCGTGG
TGATGGTGGCTGAGAAGCCCAGTATTTGCAATTCCATCGCTCATGCGCTG
TGCGGTGGGGCGGAACTGAGCACACGTGGACGTTCGCCACCTGTGCATGA
GTTTCACGGGCGCTTCGAAGGGCAGGCGGCGCGCATCCGCGTCACGTCGG
TCACTGGTCACGTATTTTCTACAGATTTTCCGGGTCAATATAGCAATTGG
GAAGCGGTGGACCCCGTCGACTTATTTCGTGCTCCAACATGCAAAGAGCC
GACCAGCAAATTCATAACGCACCACCTGGCTTCGGAGGGCAAAGGGGCAG
ATGTCCTCGTCTTGTGGCTAGATTGCGATCGCGAGGGAGAGAATATCTGC
TTTGAGGTCATTGACTGCATGCAACAAGGCTTCAAATCTCATACACGCAT
CCTCCGCGCACATTTCTCCGCCATTACCCCTAAAGACATCCAACACGCCC
TGCAGAATCTAGGAGTGCCCAACAAGAACGAAGCCCTCTCAGTAGATGCA
CGGCAAGAGCTGGACCTCAAAGTTGGCGTAGCATTCTCCCGCTTTCAGAC
TCGTTACTTTCAGGGCAAGTACGGGGACCTCGACTCGACCCTAGTTTCTT
ACGGACCCTGTCAGACGCCCACGCTCGGATTCTGCGTTCAGCGTCATGAC
AATATCCAATCATTTACTCCCGAGAAGTTTTGGTATGTGGCCGCGACCAT
CGTCAAGGATGGCGTGAGCGTGCCGCTCGAATGGAACCGAGGCCGCCTGT
TCGACCAAGAAGTGGCCCACGTCTTCCTGCACCTGGTGGGAGAGGCGGGT
ACAGTCACAGTAGATAAGGTTCTAAAGTCCGAGCAGCGTCGCACGAAGCC
CTCTGCCATGAATACTGTCGAAATGCTCAAGGAGGCATCGAAAGTTCTGG
GTATGGGGCCTGCTCAGACCATGTCCATCGCCGAGAGGCTTTACTTGTCG
GGCTACCTGTCCTACCCCCGCACCGAGTCCACTGCCTATCCCGAGAGCTT
TGACGTGCGAGGTTCGCTGGCCTTGCAAACGTCTCACCCCATCTGGGGCG
ACTATGCCAAGGGCCTTTTAGAAGAGGGGGTGGCACGACCCCGCGCAGGA
CTAGACGCAGGCGATCATCCGCCCATTACCCCTGTCCGTGCTTTGGATTC
GACGGAGTTTCCGGGTGATATGGGACGGCTCTATGAGCTGGTTACTCGTC
ACTTCCTTGCAACTCTATCCCATGACGCGCGCTTCCTCCAGACCAAGGTC
CTGCTATCCTCGACGAGCGGGGAGAATTTCACTGTTGCCGGCAAAATTAT
GATTGACCCGGGCTACCTCGCGGTATTGTTGCAGTCCAAGGACGAGAACA
AGTTGCCAGATTTTCGAGAAGGAGAGCGCTTTAGCTTTGCTTCGCTAGCC
CTTCGTGACGGGCAGACAGCCCCGCCAGGCTACCTGACTGAGAGCGAGTT
AATTGAGAAGATGGAAAAGCATGGCATCGGCACCGACGCCTCCATATCCT
CACATATCAACAACATTGTTGAACGCAACTACGTGCACATTGGTGACGGT
CGTACCCTTATTCCCAACCCTTTGGGCATCGTGCTTGTCCATGGCTATCT
GAGAATAGACGCGGACCTTGTCCTGCCCAAGGTGCGGGCACAGATCGAGA
GCGAGTGCACACTTATCGCCAAGGGACTGGCGGACATGCAGAGCGTGGTG
GATCATTCGCTAAAGAACTTTGAAGCCAAGTTTCGGTACTTTGCCGAGCA
TATCGATCTGATGGACTCCCTGTTTGAAGCAACTTTCAGCCCGCTGGTTA
GTGTAGGAAGGAGACAGATAGTAAGGGAAATATGGAAGAAATAG

Synonyms

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