NO21G00020.1, NO21G00020.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G00020.1
Unique Name	NO21G00020.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2961
Alignment location	chr21:3046..8228 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:3046..8228 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G00020.1 vs.
Match: EWM20665.1 (mitochondrial phosphate carrier protein [Nannochloropsis gaditana])

HSP 1 Score: 657.1 bits (1694), Expect = 4.700e-185
Identity = 376/555 (67.75%), Postives = 425/555 (76.58%), Query Frame = 0

Query:    1 MRPPLFLVCLSYVALLGSQASWAWIAFFPGGQRGASAATSPSSSSPGLHRQSWGDVSASSSSRRRRCPSCGTRACA---SSSSSSSPFLPPSLSHALPSARGGGAFSARRRGRQTAAVTAAAAGEQPPSSSSSSPLHINTTGQAQSYSNDSSSGGRRNGPLLHSSSISSSLTKLSRGGKDTGNLSSFPPSPSSSSSGRRHLSNTKPSSTLFILAFGLFLTAAAAVIPSSLLVSPGLSSLSSSTSSSLLSFFLAKLRPPPGIEPTGRDLYWRIFLSGGVCASISHGWAVPLDVVKTRLQTDPERYQGLGIWGACEKIRREEGPGMLLKGLGATLTGYSIQGSLKYGLYAMLKTVMKRALPLSSVSVTWVLASMMADVIASTALCPLEATRIRLVADPGFAHGTLDGLANLIGKEGVSSIFKGMPAILAKQLPYTIVQLCGFELITRLFYSWEVTAALVHSPGPWQWAVSFGSAVITGIFASLASQPGDVILSRVNRDRSHKPVLETMKDAVRELGIKGLFKGTRARLLHVGMIVTIQLVIYDFVKQLVGLPATGAH 553
            MRP  FLVCLSYVALLGSQASWAWIAF P GQRGASAA+ PSS      +  W  VS+      RRCPSCG  AC+   SSSSSS   LPP+L    PSARGGGAFS+RRRGRQ            PP  SS S L         S ++ SS  G  +  L    S+ ++    ++G   + + SS  P PS     RR     K SST+ IL   L LT  AA+IPS+LL          ++S+SLL+  LA+LRPPPGIEP+G DLYWRIFL+GGVCASISHGWAVPLDVVKTRLQTDP RYQGLGIWGACEKIRREEGPGMLLKGLGATLTGYSIQGSLKYGLYA+ K+V+ R LP SS+ VTWVLASM+AD IASTALCPLEATRIRLVADP FA GTLDG+ +L+ +EG SSIFKGMPAILAKQLPYTIVQLCGFELITR+FYSWEVTA LVH+PGPWQW VSFGSA+ITG+FAS+ASQPGDVILSRVN+ +SHK V+ETM++AV+ELG++GL+KGTRARLLHVGMIVTIQLVIYDFVKQLVGLPATGAH
Sbjct:    1 MRPSPFLVCLSYVALLGSQASWAWIAFLPVGQRGASAASCPSSP-----QTLWAGVSSQGP---RRCPSCGALACSTPSSSSSSSLALLPPTL----PSARGGGAFSSRRRGRQ------------PPPVSSPSELRA-------SGADGSSDPGTESDALPPPPSVPANARPDAKGQVSSASTSS--PFPSQ----RRPPGKQKLSSTIPILGIALLLTGLAALIPSALL-------FPDASSASLLASLLARLRPPPGIEPSGGDLYWRIFLAGGVCASISHGWAVPLDVVKTRLQTDPARYQGLGIWGACEKIRREEGPGMLLKGLGATLTGYSIQGSLKYGLYAIFKSVVTRLLPSSSIFVTWVLASMIADCIASTALCPLEATRIRLVADPSFASGTLDGIGHLLREEGCSSIFKGMPAILAKQLPYTIVQLCGFELITRVFYSWEVTARLVHAPGPWQWLVSFGSALITGVFASIASQPGDVILSRVNKTKSHKAVVETMREAVQELGLRGLYKGTRARLLHVGMIVTIQLVIYDFVKQLVGLPATGAH 511

The following BLAST results are available for this feature:

BLAST of NO21G00020.1 vs.

BLAST of NO21G00020.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM20665.1	4.700e-185	67.75	mitochondrial phosphate carrier protein [Nannochlo...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G00020	NO21G00020	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00020.1	NO21G00020.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00020.1.cds1	NO21G00020.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds2	NO21G00020.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds3	NO21G00020.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds4	NO21G00020.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds5	NO21G00020.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds6	NO21G00020.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds7	NO21G00020.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds8	NO21G00020.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds9	NO21G00020.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00020.1.cds10	NO21G00020.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:3046..8228+
coding sequence from alignment at chr21:3046..8228+

mRNA sequence

>NO21G00020.1 ID=NO21G00020.1|Name=NO21G00020.1|organism=Nannochloropsis oceanica|type=mRNA|length=2961bp
AGAAGTCGTCTCGTGACGTTATCTTCCACAATCTTATCGGCGGCGCATTA
TCAGGCGGCGGGACGTCGAGTGGGTAAGGTCGAGCTGCAGCGGGAAGAGG
AAGGATCAGGAGGAGAGCTCCAGCGCGAGCATCATGCGCCCTCCCCTCTT
CCTTGTCTGCCTCTCCTATGTCGCTTTGCTCGGTTCCCAAGCCTCCTGGG
CATGGATTGCTTTCTTCCCTGGAGGTCAACGCGGGGCGTCGGCGGCCACC
AGCCCAAGCAGCAGCAGCCCTGGCTTGCATCGTCAGTCTTGGGGGGATGT
CAGCGCAAGCAGTAGCAGCAGAAGAAGAAGATGCCCTTCCTGCGGCACCC
GTGCCTGCGCCTCGTCCTCGTCCTCGTCCTCCCCCTTCCTTCCACCCTCC
CTCTCCCACGCCCTCCCCTCGGCCCGGGGCGGCGGCGCTTTTTCCGCACG
GCGCCGCGGGCGACAAACTGCCGCAGTCACTGCCGCGGCTGCAGGAGAGC
AGCCCCCTTCCTCCTCCTCCTCCTCCCCCCTCCACATCAATACTACAGGC
CAAGCACAGAGCTACAGCAACGACAGCAGCAGTGGCGGCCGTAGGAACGG
CCCCCTCCTTCACTCCTCCTCGATCTCCTCCTCCCTCACCAAACTCTCAA
GAGGCGGGAAAGATACGGGCAACCTGTCCTCCTTTCCCCCCTCCCCCTCC
TCCTCTTCCTCGGGGCGACGTCATCTAAGCAATACAAAACCGAGCAGCAC
GCTCTTCATCCTCGCCTTCGGCCTCTTCCTCACCGCTGCCGCCGCCGTTA
TCCCGTCCTCCTTACTCGTCTCCCCCGGCCTCTCCTCCCTCTCTTCCTCA
ACCTCCTCCTCCCTCCTCTCCTTCTTCCTGGCCAAGCTGCGACCGCCCCC
CGGGATCGAGCCGACCGGGAGAGACCTTTACTGGAGGATATTCCTCTCGG
GCGGCGTGTGTGCCAGCATCTCGCACGGGTGGGCCGTGCCTCTAGACGTG
GTCAAGACGCGGCTGCAGACGGACCCCGAGCGCTACCAAGGCCTGGGCAT
CTGGGGGGCGTGTGAAAAGATAAGACGGGAAGAAGGGCCGGGCATGCTCC
TCAAGGGCCTCGGCGCCACGTTAACAGGCTACTCGATCCAAGGCTCCCTC
AAGTACGGCCTCTACGCCATGCTCAAGACCGTGATGAAGCGGGCCCTACC
GCTCTCATCCGTATCAGTCACTTGGGTATTGGCCAGCATGATGGCCGACG
TCATCGCCAGCACCGCCCTCTGTCCTCTCGAGGCCACTCGCATCCGCCTA
GTGGCCGATCCGGGTTTCGCCCACGGGACCTTGGACGGCCTAGCGAACCT
CATCGGGAAGGAGGGCGTGTCGAGCATCTTCAAGGGCATGCCGGCCATCC
TGGCCAAGCAGCTCCCTTACACCATTGTGCAACTGTGCGGCTTCGAGCTC
ATCACGCGTCTGTTCTACTCCTGGGAGGTGACGGCGGCCCTCGTGCACTC
CCCGGGGCCCTGGCAGTGGGCAGTGTCGTTCGGCAGCGCGGTTATCACGG
GAATCTTCGCCTCCCTTGCCTCCCAGCCGGGGGACGTGATCCTTTCGCGG
GTCAACAGGGACAGGAGCCACAAGCCGGTGCTGGAGACGATGAAGGACGC
AGTGCGGGAGTTGGGCATCAAGGGACTCTTCAAAGGCACGCGCGCGCGTC
TGCTGCACGTGGGCATGATCGTGACCATCCAGCTCGTCATCTACGACTTT
GTCAAGCAACTGGTCGGCTTGCCCGCCACGGGGGCTCACTAAGGGGGAGA
AACCCCAGCAGGAAAACAAGTAAGAGCGGAGAAGATGGGCGAAGTAGGGA
GGAAAGGCGGCGTTGTTTGTCCATGTCCTGTGTCGGGGGGATGAAGTGGG
TGACTTGGTAGATGGGGAGGCGGACGAGGGGGCGAACGAGCGGGCGAACG
AGCGGGCAAACGAGGGGGCGAACGAGGGGGCGAATGAGGGGGCGAATGAG
GGGGCAGTTATTTCTCTCAGGGTCTGCCTCTCTCGCTGTGGTGCTCGGTT
TCCCGTCGCGAGTCTGTCTGCCAACTACGGGTTGAGAGCGTGGGCCAGTC
AGAAGTATATGTGTGTTGTTGGGTAAGGGTGTCATGGGTTTGAGCATATG
TGTGTTGGGTAGGGGTGTCATGGGGTTGAGCATATGTGTGTGTGTAAAAG
AAAGAATAAAAGCTTGTGTGAGTGATGCGAGGGGGGCGAAATAAAAAAAC
AAAGAGAGGAAGGTGCACTTATACAAGGGAAAACAGTCAGTTGGTACAGT
GGGCATACGTACGCGACATTATAGGGCGGAGAGAGGGAGAAGGGGGACAA
AAGTCAGGCACTGGGTCTAGTAGAAGTGTTTAAAGACGAGAATTATAGGC
ACACACGTAGGCAAGCCATTTATGACCATTGCGACGGCCCATGCCATGCT
TGCATTCATTGGCATCAAGAGTGTCACGACACATACACGCATACATGCCC
CTAGGAGGCCAGCAACGACACGAAAAGAGAAACAGGACAAAAGTGAGAGA
ACATAGAGTTTGGAATAAGCAGACAGCATGCATTTCGAATGAATGCTATC
CAATCGATCGACAACATATGAAAAATAGATGATTTAATAACACACAAATA
TCCATGCTTTATTCTCTCGCAGACGCATCGGTAGCCTCTTTGGAATCGAC
ACGAGGCAATGCTTTACAAACATTGAGCACGCGGTCTTCACATAGCAACA
AAACGGCGACAAACCATTGCAACTTTGCCACCACATAAGGTTAGGGTTAT
GGACGCCAATTACTTTCCCCTTGTCGCATTGATTTTCCACACTGACCGTA
CGACATATAACCCACAACTGCTCTCTTCCAGCAATTCATGACGTTATATA
CCTTATGAGAAGCCTTTCATGATCGAAAGAGGGGCACAAAGGCCATACTG
AAGGGGAAAAC

protein sequence of NO21G00020.1

>NO21G00020.1-protein ID=NO21G00020.1-protein|Name=NO21G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=553bp
MRPPLFLVCLSYVALLGSQASWAWIAFFPGGQRGASAATSPSSSSPGLHR
QSWGDVSASSSSRRRRCPSCGTRACASSSSSSSPFLPPSLSHALPSARGG
GAFSARRRGRQTAAVTAAAAGEQPPSSSSSSPLHINTTGQAQSYSNDSSS
GGRRNGPLLHSSSISSSLTKLSRGGKDTGNLSSFPPSPSSSSSGRRHLSN
TKPSSTLFILAFGLFLTAAAAVIPSSLLVSPGLSSLSSSTSSSLLSFFLA
KLRPPPGIEPTGRDLYWRIFLSGGVCASISHGWAVPLDVVKTRLQTDPER
YQGLGIWGACEKIRREEGPGMLLKGLGATLTGYSIQGSLKYGLYAMLKTV
MKRALPLSSVSVTWVLASMMADVIASTALCPLEATRIRLVADPGFAHGTL
DGLANLIGKEGVSSIFKGMPAILAKQLPYTIVQLCGFELITRLFYSWEVT
AALVHSPGPWQWAVSFGSAVITGIFASLASQPGDVILSRVNRDRSHKPVL
ETMKDAVRELGIKGLFKGTRARLLHVGMIVTIQLVIYDFVKQLVGLPATG
AH*

mRNA from alignment at chr21:3046..8228+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G00020.1 ID=NO21G00020.1|Name=NO21G00020.1|organism=Nannochloropsis oceanica|type=mRNA|length=5183bp|location=Sequence derived from alignment at chr21:3046..8228+ (Nannochloropsis oceanica)
AGAAGTCGTCTCGTGACGTTATCTTCCACAATCTTATCGGCGGCGCATTA
TCAGGCGGCGGGACGTCGAGTGGGTAAGGTCGAGCTGCAGCGGGAAGAGG
AAGGATCAGGAGGAGAGCTCCAGCGCGAGGTGAGTGCAACAGACTAGCAC
CTGCTCTGCAAAGTACGTTAGAAGAGAGTATGCAGGGCTAGTGACTTGCT
GTAGTCATGTCAGTATCGTCCTTGTTAGCTTATCAATGCCTTCCTGCTCC
AGCCTCGCCTGGGTTTAGACGATGACAAATCTTTCATTCGCCTGAAGACC
CTTCTCCTCCCTTCCTCCTCCTTCCTTCCACCCTCTCTCCCCCAGCATCA
TGCGCCCTCCCCTCTTCCTTGTCTGCCTCTCCTATGTCGCTTTGCTCGGT
TCCCAAGCCTCCTGGGCATGGATTGCTTTCTTCCCTGGAGGTCAACGCGG
GGCGTCGGCGGCCACCAGCCCAAGCAGCAGCAGCCCTGGCTTGCATCGTC
AGTCTTGGGGGGATGTCAGGTAGGCGGAGAGGGGTAGATGGAGAGAAGGG
AGCCCGAAAGGGGAGAGGGAGGAGCACGAAGGAAGGTGCAGACTGAGGTT
TCGACGGCTGCAAGCCTTCACTCGCTCATTTTCACTCTCGCCCTTTTTCT
TGGTGTCCTCCACTTACTACACGCACAGCGCAAGCAGTAGCAGCAGAAGA
AGAAGATGCCCTTCCTGCGGCACCCGTGCCTGCGCCTCGTCCTCGTCCTC
GTCCTCCCCCTTCCTTCCACCCTCCCTCTCCCACGCCCTCCCCTCGGCCC
GGGGCGGCGGCGCTTTTTCCGCACGGCGCCGCGGGCGACAAACTGCCGCA
GTCACTGCCGCGGCTGCAGGAGAGCAGCCCCCTTCCTCCTCCTCCTCCTC
CCCCCTCCACATCAATACTACAGGCCAAGCACAGAGCTACAGCAACGACA
GCAGCAGTGGCGGCCGTAGGAACGGCCCCCTCCTTCACTCCTCCTCGATC
TCCTCCTCCCTCACCAAACTCTCAAGAGGCGGGAAAGATACGGGCAACCT
GTCCTCCTTTCCCCCCTCCCCCTCCTCCTCTTCCTCGGGGCGACGTCATC
TAAGCAATACAAAACCGAGCAGCACGCTCTTCATCCTCGCCTTCGGCCTC
TTCCTCACCGCTGCCGCCGCCGTTATCCCGTCCTCCTTACTCGTCTCCCC
CGGCCTCTCCTCCCTCTCTTCCTCAACCTCCTCCTCCCTCCTCTCCTTCT
TCCTGGCCAAGCTGCGACCGCCCCCCGGGATCGAGCCGACCGGGAGAGAC
CTTTACTGGAGGATATTCCTCTCGGGCGGCGTGTGTGCCAGCATCTCGCA
CGGGTGGGCCGTGCCTCTAGGCAAGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAAGGGTGGTTTTGGGGCCCGACGAAACCCTCGCCAGGGGCATGGGT
GAAGCCGAGAGGGAATCAAGAATGTCTCATGATTGCGTGCTATCTTTACG
ATGTCGATGTATCAATGTGGCCGTGTCAGAGTGTGAGGGAGCTCACTCCT
CCTTCTTAATTCCTGCCTCCCGCCCTCCTCCCCCAGACGTGGTCAAGACG
CGGCTGCAGACGGACCCCGAGCGCTACCAAGGCCTGGGCATCTGGGGGGC
GTGTGAAAAGATAAGGTGAGAGAGAGGGGGAGGGAGAGAGGGGAGGAGGG
AGAGAGGGGAGGAGAGAGAGAGGGAGGGGGAGAGAGAGGGAGGGGGAGAG
AGAGGGAGGGGGAGAGAGGGAGGGAGGAGGGTCAAAGTGCGGTCGCACTC
GGGGAACGGGGGAGGGAGAAGGTGAGGTGAGGGAGGTCGGGATGGAGAGG
GGGGGAATGGCGAGTGGAGGCAATGCGCATTGCTTTTATATCCTAACGGG
ATCTCTTCTCCTCCTTTGCTTTCCTCCTTCTCTTCCTCCCTCCCCTGTAG
ACGGGAAGAAGGGCCGGGCATGCTCCTCAAGGGCCTCGGCGCCACGTTAA
CAGGTAGGTGTAAGGGCAGCTGTCTTTCCCCCTCATTACCCCCTCCTTCG
TTCGGTCCCTCCGTTCCTTCCTCTCTCTTTTCTTCAAGCTTCAGGTCGTC
CCGGTCTCAGCTTCGTCGTCCCCCCCCTCCCCCCCTCCCTTCTTCCCCCC
CCTCAAGGCTACTCGATCCAAGGCTCCCTCAAGTACGGCCTCTACGCCAT
GCTCAAGACCGTGATGAAGCGGGCCCTACCGCTCTCATCCGTATCAGTCA
CTTGGGTATTGGCCAGCATGATGGCCGACGTCATCGCCAGCACCGCCCTC
TGTCCTCTCGAGGTACGTGCCTTTCTCCCTCCTTCCCGCCCGCCCTCCCC
TCCTCCCTCCCTCCCTGCGCATTTCTGCCTCCTCCCTCAGTCCTCGCACA
AGCCAGTCTCGGCGAGAGCGCGGCTTTATGCCGTTAGTGATAGCCAACAT
TGACTCCCAGCACCCATGCCATTGCTGACTGCAAGCATGCGTGCATGTCC
TCCAGCGGAACGTGCTTGCTGTCCTCACTCCCTTTCCGTGCGCCCGGCTG
CTCCCCCAAAGCGTGTCTTGTCCCTCTCTCCCCTCACGCTCACTTCTTTC
TGCCTGCCCTCTTCCATTTCACCACTCCTTGCCCTCTCCCTCCACGCACT
TATTGTCCTCCCTCCCTCCCTCCTCCTCCCGCTCCTTCCACGCAGGCCAC
TCGCATCCGCCTAGTGGCCGATCCGGGTTTCGCCCACGGGACCTTGGACG
GCCTAGCGAACCTCATCGGGAAGGAGGGCGTGTCGAGCATCTTCAAGGGC
ATGCCGGCCATCCTGGCCAAGCAGCTCCCTTACACCATTGGTGGGTAGGT
GGGCGGGTGCCTGCAGCCCTCCTGCCCTCCCTCTCTCCTTCCTCCCTTCC
CTGTTCTTGGCACCTCCCACATTCCCTCCCTGCGGACCAACTCCACACCC
AACTTACCCCGCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCC
TCTTCTCAGTGCAACTGTGCGGCTTCGAGCTCATCACGCGTCTGTTCTAC
TCCTGGGAGGTGACGGCGGCCCTCGTGCACTCCCCGGGGCCCTGGCAGTG
GGCAGTGTCGTTCGGCAGCGCGGTTATCACGGTGAGCACACGGCATGAGC
TCTCACACACACAGACACACGCACACAAGCAGCACCGAGGATGACGGATC
TCTCCCTCAAAAGCACACTCACACACGAGCCCCCAAACTCAATCTTCTCA
CCTTTGCCGCCCTTTCTGCTGCTCCTTCCATGCCCTCCCTCCCTCCCTCC
CTCCCTCGACCAGGGAATCTTCGCCTCCCTTGCCTCCCAGCCGGGGGACG
TGATCCTTTCGCGGGTCAACAGGGACAGGAGCCACAAGGTGGGTAGTTCA
AGAGAGGGGGGAGGGGGGGAAGGAGGGTGGGAGGGAGGGAGGGAGGCAAG
GAGGGAGGGAGGGTGAGATGGAAAGGTGAAGCAGTTTATTTAAAACACCC
TCCACTCCCACTGCACTCACACCGACCCTCCCTCGCTTCCTTCCATCCTC
CCTGCCTCCCTCCCTCCCTTTGCGAAGCCGGTGCTGGAGACGATGAAGGA
CGCAGTGCGGGAGTTGGGCATCAAGGGACTCTTCAAAGGCACGGTAAGCA
GTCAGGAATACGTCGTGTATTGATGCGTGGGACAGAGAAAAGGGAGGAGA
AGGGAGGGATAGGAGGGATAAGAGTGAACAAGAGCCGCGGGACTCGCTTT
CCCCTGGGAATCGACTCAGTCGGTCGGTCGATCCGGCGCCCTGGCCCATT
TTGCCGCTTGTCTCTCTGGGAAAGGAAGGTACAGCCCGAACGACCTCCAT
CAGCACCTCACACCCCGTTCTCCTCCTCCCTCTCTGCCCTCCCACCTCCT
CCTCTCCCTTAGCGCGCGCGTCTGCTGCACGTGGGCATGATCGTGACCAT
CCAGCTCGTCATCTACGACTTTGTCAAGCAACTGGTCGGCTTGCCCGCCA
CGGGGGCTCACTAAGGGGGAGAAACCCCAGCAGGAAAACAAGTAAGAGCG
GAGAAGATGGGCGAAGTAGGGAGGAAAGGCGGCGTTGTTTGTCCATGTCC
TGTGTCGGGGGGATGAAGTGGGTGACTTGGTAGATGGGGAGGCGGACGAG
GGGGCGAACGAGCGGGCGAACGAGCGGGCAAACGAGGGGGCGAACGAGGG
GGCGAATGAGGGGGCGAATGAGGGGGCAGTTATTTCTCTCAGGGTCTGCC
TCTCTCGCTGTGGTGCTCGGTTTCCCGTCGCGAGTCTGTCTGCCAACTAC
GGGTTGAGAGCGTGGGCCAGTCAGAAGTATATGTGTGTTGTTGGGTAAGG
GTGTCATGGGTTTGAGCATATGTGTGTTGGGTAGGGGTGTCATGGGGTTG
AGCATATGTGTGTGTGTAAAAGAAAGAATAAAAGCTTGTGTGAGTGATGC
GAGGGGGGCGAAATAAAAAAACAAAGAGAGGAAGGTGCACTTATACAAGG
GAAAACAGTCAGTTGGTACAGTGGGCATACGTACGCGACATTATAGGGCG
GAGAGAGGGAGAAGGGGGACAAAAGTCAGGCACTGGGTCTAGTAGAAGTG
TTTAAAGACGAGAATTATAGGCACACACGTAGGCAAGCCATTTATGACCA
TTGCGACGGCCCATGCCATGCTTGCATTCATTGGCATCAAGAGTGTCACG
ACACATACACGCATACATGCCCCTAGGAGGCCAGCAACGACACGAAAAGA
GAAACAGGACAAAAGTGAGAGAACATAGAGTTTGGAATAAGCAGACAGCA
TGCATTTCGAATGAATGCTATCCAATCGATCGACAACATATGAAAAATAG
ATGATTTAATAACACACAAATATCCATGCTTTATTCTCTCGCAGACGCAT
CGGTAGCCTCTTTGGAATCGACACGAGGCAATGCTTTACAAACATTGAGC
ACGCGGTCTTCACATAGCAACAAAACGGCGACAAACCATTGCAACTTTGC
CACCACATAAGGTTAGGGTTATGGACGCCAATTACTTTCCCCTTGTCGCA
TTGATTTTCCACACTGACCGTACGACATATAACCCACAACTGCTCTCTTC
CAGCAATTCATGACGTTATATACCTTATGAGAAGCCTTTCATGATCGAAA
GAGGGGCACAAAGGCCATACTGAAGGGGAAAAC

Coding sequence (CDS) from alignment at chr21:3046..8228+

>NO21G00020.1 ID=NO21G00020.1|Name=NO21G00020.1|organism=Nannochloropsis oceanica|type=CDS|length=1659bp|location=Sequence derived from alignment at chr21:3046..8228+ (Nannochloropsis oceanica)
ATGCGCCCTCCCCTCTTCCTTGTCTGCCTCTCCTATGTCGCTTTGCTCGG
TTCCCAAGCCTCCTGGGCATGGATTGCTTTCTTCCCTGGAGGTCAACGCG
GGGCGTCGGCGGCCACCAGCCCAAGCAGCAGCAGCCCTGGCTTGCATCGT
CAGTCTTGGGGGGATGTCAGCGCAAGCAGTAGCAGCAGAAGAAGAAGATG
CCCTTCCTGCGGCACCCGTGCCTGCGCCTCGTCCTCGTCCTCGTCCTCCC
CCTTCCTTCCACCCTCCCTCTCCCACGCCCTCCCCTCGGCCCGGGGCGGC
GGCGCTTTTTCCGCACGGCGCCGCGGGCGACAAACTGCCGCAGTCACTGC
CGCGGCTGCAGGAGAGCAGCCCCCTTCCTCCTCCTCCTCCTCCCCCCTCC
ACATCAATACTACAGGCCAAGCACAGAGCTACAGCAACGACAGCAGCAGT
GGCGGCCGTAGGAACGGCCCCCTCCTTCACTCCTCCTCGATCTCCTCCTC
CCTCACCAAACTCTCAAGAGGCGGGAAAGATACGGGCAACCTGTCCTCCT
TTCCCCCCTCCCCCTCCTCCTCTTCCTCGGGGCGACGTCATCTAAGCAAT
ACAAAACCGAGCAGCACGCTCTTCATCCTCGCCTTCGGCCTCTTCCTCAC
CGCTGCCGCCGCCGTTATCCCGTCCTCCTTACTCGTCTCCCCCGGCCTCT
CCTCCCTCTCTTCCTCAACCTCCTCCTCCCTCCTCTCCTTCTTCCTGGCC
AAGCTGCGACCGCCCCCCGGGATCGAGCCGACCGGGAGAGACCTTTACTG
GAGGATATTCCTCTCGGGCGGCGTGTGTGCCAGCATCTCGCACGGGTGGG
CCGTGCCTCTAGACGTGGTCAAGACGCGGCTGCAGACGGACCCCGAGCGC
TACCAAGGCCTGGGCATCTGGGGGGCGTGTGAAAAGATAAGACGGGAAGA
AGGGCCGGGCATGCTCCTCAAGGGCCTCGGCGCCACGTTAACAGGCTACT
CGATCCAAGGCTCCCTCAAGTACGGCCTCTACGCCATGCTCAAGACCGTG
ATGAAGCGGGCCCTACCGCTCTCATCCGTATCAGTCACTTGGGTATTGGC
CAGCATGATGGCCGACGTCATCGCCAGCACCGCCCTCTGTCCTCTCGAGG
CCACTCGCATCCGCCTAGTGGCCGATCCGGGTTTCGCCCACGGGACCTTG
GACGGCCTAGCGAACCTCATCGGGAAGGAGGGCGTGTCGAGCATCTTCAA
GGGCATGCCGGCCATCCTGGCCAAGCAGCTCCCTTACACCATTGTGCAAC
TGTGCGGCTTCGAGCTCATCACGCGTCTGTTCTACTCCTGGGAGGTGACG
GCGGCCCTCGTGCACTCCCCGGGGCCCTGGCAGTGGGCAGTGTCGTTCGG
CAGCGCGGTTATCACGGGAATCTTCGCCTCCCTTGCCTCCCAGCCGGGGG
ACGTGATCCTTTCGCGGGTCAACAGGGACAGGAGCCACAAGCCGGTGCTG
GAGACGATGAAGGACGCAGTGCGGGAGTTGGGCATCAAGGGACTCTTCAA
AGGCACGCGCGCGCGTCTGCTGCACGTGGGCATGATCGTGACCATCCAGC
TCGTCATCTACGACTTTGTCAAGCAACTGGTCGGCTTGCCCGCCACGGGG
GCTCACTAA

Synonyms

Publications