NO20G02200.1, NO20G02200.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G02200.1
Unique Name	NO20G02200.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2739
Alignment location	chr20:660438..665604 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:660438..665604 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G02200.1 vs.
Match: CBN76872.1 (selenoprotein O homolog [Ectocarpus siliculosus])

HSP 1 Score: 526.6 bits (1355), Expect = 1.300e-145
Identity = 303/585 (51.79%), Postives = 391/585 (66.84%), Query Frame = 0

Query:   79 ASTFRSSVPSSPAMSIRTLCAA-STTTDGSSSSTSPSTAAAATAAVAPSSEKTYTLETLPFDNLALHSLPVDPQAENFVRQVPNSVFSRVKPEPVKNPVLVAASPSALTDLLSLAPSELQRTEDLASYFGGNQLLPGSETYASCYAGHQFGAFSGQLGDGAAISLGEVVNTEGKRFEVQLKGAGPTPYSRRADGRKVLRSSIREFLCSEAMHFLGVPTTRAAALVTSDSLTQRDVFYNGNVINERCSVVTRLAPSFLRFGSFEVVKPKDGYTGRAGPSSGNKELLRQLLDYTIQTYFPELGSLEDDKTQ-QYLAFYTEVIKSTAALVAHWQGIGFTHGVLNTDNMSVLGLTIDYGPYGFLDFFDPDFISNGSDNGGRYCYGKQPEICKWNLEKFAESLSLLLPLDLSLPRLASLYDLEYSRAYSRIMHQKLGLKQEGGTEGGTEGGGEDEVVRELFKTMEGTAADFTMTFVELSRLGREGENKEKIIKALASHCAPPSVVAAALTKKLRISRPTMPSGQTQQLWVLAQQDKSKIAEIFGAENVDAVCRELEGEMEKMRKVESVALAIEKNKG-QGEGEKRKEDEE 661
            +ST   + P++   +  T   + S   D   ++   S  A +TA  A ++  + TL+TLPFDN  +  LPVDP  +N+VR+V N+ FS V P+PV  PV+VAAS SAL  LL LA  E QR ED A YF GN+L+PG++ +A  Y GHQFG+F+GQLGDGAA+ LGEV    G R+E+Q KGAG TPYSR ADGRKVLRSSIREFLCSEAMHFLG+PTTRAAALVTSD+  +RDVFY GNVI ER S+VTRLAP+FLRFGSFE+ KP+D  TGR GPS+GN  L  Q+L+Y I  +FP   +   + ++ +YLA Y E ++STA LVA WQ +GFTHGVLNTDNMS+LGLTIDYGPYGF+DFFDP F+ NGSD GGRY Y +QPE+CKWNL KFAE+++  LPL  S   L   YD  +   Y   M +KLGL      + G        +   LF TM  T+ADFT TF EL++L   G + + + KALA+ CA P + A AL + + I RP++P  Q Q LW +AQ++   +A+ F A   DAV  EL  EM+K+   ++    ++  +  + +G +  ED E
Sbjct:   49 SSTAAFTYPAAATAAAATASVSHSNRNDRVVTARPASRTAMSTAVDAAATCSSSTLDTLPFDNRVIRELPVDPITDNYVRRVENACFSIVAPDPVVKPVMVAASNSAL-GLLGLAAEEGQR-EDAAEYFSGNKLMPGAQPHAHAYCGHQFGSFAGQLGDGAAMYLGEVEGPSG-RWEIQFKGAGLTPYSRSADGRKVLRSSIREFLCSEAMHFLGIPTTRAAALVTSDTKVRRDVFYTGNVIQERASIVTRLAPTFLRFGSFEIFKPRDPRTGRDGPSAGNDALRLQMLEYAIGRFFPGAAAAGPEGSKARYLAMYEEAVRSTAELVAKWQCVGFTHGVLNTDNMSILGLTIDYGPYGFMDFFDPKFVPNGSDGGGRYSYERQPEMCKWNLHKFAEAVAPALPLSDSTAALEK-YDGLFKGYYEEGMRRKLGLFSVEEDDDG--------LFESLFATMADTSADFTGTFRELAQL-VPGGDVDAVSKALAAQCAGPKIKAKALRRAVDIGRPSIPPQQLQGLWAMAQENPEALAQRFSAPK-DAVIAELREEMQKLSNYDAAQQRLKDMEALEEDGXEAIEDAE 619

The following BLAST results are available for this feature:

BLAST of NO20G02200.1 vs.

BLAST of NO20G02200.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBN76872.1	1.300e-145	51.79	selenoprotein O homolog [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G02200	NO20G02200	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G02200.1	NO20G02200.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G02200.1.cds1	NO20G02200.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds2	NO20G02200.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds3	NO20G02200.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds4	NO20G02200.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds5	NO20G02200.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds6	NO20G02200.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds7	NO20G02200.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds8	NO20G02200.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds9	NO20G02200.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds10	NO20G02200.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds11	NO20G02200.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G02200.1.cds12	NO20G02200.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:660438..665604+
coding sequence from alignment at chr20:660438..665604+

mRNA sequence

>NO20G02200.1 ID=NO20G02200.1|Name=NO20G02200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2739bp
CAGCCCAACCTCCCTTCCTCTCTACAAGCACACCTACACCCTCCCTCCAT
ACCACCTTCCGTACGTGTCGTGTATGCCTGGCGCCATTCATAGGGCCTCA
GGCACGCTGCTTTTGCCCCTTAAACTCGTCCTCTTCGCGGTCCTCGTCGC
TCGTGCTGCTTCCTCCCTCACCCCTTCTTTTCCTCCCTCCCGGCCATCGA
GACCGACGGCCAATAAGCACACACTGGCATTCACACGCCGCTTTTATACC
GTGGTGGCACGCCATCGAGCCTGCTACCTGCGCCCTATCACGAGCCACAC
TCGCTTTGCCAGCACTTTCCGTTCCTCCGTCCCCTCCTCGCCCGCCATGA
GCATTCGCACTTTATGTGCCGCTTCCACTACCACTGACGGTAGTAGCAGC
AGCACCAGTCCCTCTACTGCTGCTGCTGCTACTGCTGCTGTTGCTCCTTC
CTCGGAGAAGACATATACCCTGGAAACGCTCCCTTTTGACAACCTGGCCT
TGCACTCGTTGCCCGTCGACCCGCAGGCCGAGAATTTCGTCCGGCAAGTG
CCCAACAGCGTCTTCTCCCGCGTCAAGCCCGAGCCCGTCAAGAACCCGGT
GCTTGTCGCCGCCTCCCCCAGCGCCCTGACAGACCTCCTCTCCCTCGCCC
CCTCCGAGCTTCAACGCACCGAGGACCTCGCCTCGTATTTTGGAGGCAAC
CAACTCTTGCCTGGGAGTGAAACATACGCAAGCTGCTATGCTGGACATCA
ATTTGGCGCGTTTTCCGGACAGCTGGGGGATGGTGCGGCGATTTCTCTGG
GCGAGGTGGTAAACACCGAGGGGAAGCGGTTTGAAGTCCAGCTGAAGGGT
GCGGGTCCCACGCCTTACTCGCGCAGGGCCGATGGACGTAAGGTCCTGCG
TTCCTCCATCCGGGAGTTTTTGTGCTCAGAAGCGATGCATTTCCTCGGTG
TGCCCACCACCCGTGCCGCCGCCCTCGTCACCAGCGATTCCCTCACACAA
CGAGACGTGTTCTACAACGGCAACGTCATCAACGAACGCTGCTCCGTCGT
GACGCGCCTGGCCCCCTCCTTCCTCCGCTTCGGGTCATTCGAAGTAGTGA
AGCCCAAGGATGGGTATACTGGCAGGGCCGGACCTTCATCAGGGAATAAG
GAATTGCTCAGGCAGCTGCTGGACTACACCATCCAGACTTATTTCCCTGA
GCTTGGCAGCCTCGAGGACGACAAGACCCAGCAATACCTCGCCTTCTACA
CTGAGGTAATTAAGTCCACCGCGGCCCTCGTCGCCCACTGGCAGGGCATC
GGGTTCACGCATGGAGTCCTCAATACCGACAATATGAGTGTGTTGGGCCT
CACAATCGACTACGGCCCATACGGCTTTCTGGATTTTTTCGACCCGGACT
TCATTTCCAACGGCAGCGATAACGGCGGTCGTTACTGCTACGGCAAGCAG
CCAGAAATCTGTAAGTGGAACTTGGAGAAATTCGCGGAATCTCTTTCCCT
CCTCCTCCCCCTCGACCTCTCCCTCCCTCGTCTTGCCTCCCTCTACGACC
TCGAGTATAGCCGTGCTTATTCCCGCATAATGCATCAAAAGCTGGGCCTG
AAGCAGGAGGGAGGGACGGAGGGAGGGACGGAGGGAGGGGGGGAGGACGA
GGTGGTTAGAGAGTTGTTCAAGACGATGGAGGGGACGGCAGCTGACTTTA
CTATGACGTTCGTCGAGCTGAGTCGGCTGGGAAGAGAGGGAGAGAACAAG
GAGAAGATTATCAAGGCTTTGGCCTCTCACTGCGCACCTCCCTCTGTTGT
TGCCGCCGCCTTGACCAAGAAACTTCGCATCTCCCGCCCCACCATGCCGT
CGGGACAGACACAGCAGCTCTGGGTCCTGGCGCAGCAGGACAAGAGCAAA
ATCGCTGAAATTTTTGGCGCCGAAAACGTCGACGCCGTCTGCCGCGAGCT
GGAGGGCGAGATGGAAAAAATGCGGAAGGTGGAGTCGGTGGCACTGGCGA
TTGAGAAGAACAAAGGGCAGGGGGAGGGGGAGAAGAGGAAGGAGGACGAG
GAGGTCTGGAGGGGGTGGGTTGAAAAAGTGTATTTGCCGCGGGTGGCGAA
GGAGAAGAAGGAGGGGGGGGATGGAAGGATGAGAAGGAGCGCGTGCAGGC
CATGCACAAGGCCAACCCCTCTTTCGTGTTACGGAACTGGATCGCCCAGG
ACGCGATTGAGGCGGCCGAAAAACAAGACTACTCCCGAGTGCGCCTCGTG
CTCGATCTCCTTCAAGACCCCTACTACTACCCGGAAGACCGGCCGAAGGG
GGAGGGGGAGGAGGGGAGGGGGAGGGGAAAGGAGGGATGGAGGAACTTAC
GAAGAGGTATAGGGGCATGACACCTGCGTGGGCGGCGGAGCTGGTGTGTA
CGTGTTCATCGTAAAGGGAGGGAGGGAGGGAGGGGGAGAAGGAGAAAGAT
CAAATTTGAAGAAGGACAAGATGAAGTACGAAACAGATACATGCGTGCTT
GTGCATGGATTTGAATGGAAATATGTCCGCGCGGCCAAGGGAGATAAATG
CATGCGCCCTAAGACTCATATATTGAGAGGGTGAAGACGAAGATGAAAGG
GAGAATGGAAGCGACGAAGATCAAAATAGACGAAAGATGGGTGTTGTGCC
GAAACAAGCTACCGCCCAGGCCGAGCATACCCGGACAAAGAAAAATGATG
GAACAAGGACCAAAGCAAGTCCAGAAGGAAAGGGAAAAT

protein sequence of NO20G02200.1

>NO20G02200.1-protein ID=NO20G02200.1-protein|Name=NO20G02200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=763bp
MPGAIHRASGTLLLPLKLVLFAVLVARAASSLTPSFPPSRPSRPTANKHT
LAFTRRFYTVVARHRACYLRPITSHTRFASTFRSSVPSSPAMSIRTLCAA
STTTDGSSSSTSPSTAAAATAAVAPSSEKTYTLETLPFDNLALHSLPVDP
QAENFVRQVPNSVFSRVKPEPVKNPVLVAASPSALTDLLSLAPSELQRTE
DLASYFGGNQLLPGSETYASCYAGHQFGAFSGQLGDGAAISLGEVVNTEG
KRFEVQLKGAGPTPYSRRADGRKVLRSSIREFLCSEAMHFLGVPTTRAAA
LVTSDSLTQRDVFYNGNVINERCSVVTRLAPSFLRFGSFEVVKPKDGYTG
RAGPSSGNKELLRQLLDYTIQTYFPELGSLEDDKTQQYLAFYTEVIKSTA
ALVAHWQGIGFTHGVLNTDNMSVLGLTIDYGPYGFLDFFDPDFISNGSDN
GGRYCYGKQPEICKWNLEKFAESLSLLLPLDLSLPRLASLYDLEYSRAYS
RIMHQKLGLKQEGGTEGGTEGGGEDEVVRELFKTMEGTAADFTMTFVELS
RLGREGENKEKIIKALASHCAPPSVVAAALTKKLRISRPTMPSGQTQQLW
VLAQQDKSKIAEIFGAENVDAVCRELEGEMEKMRKVESVALAIEKNKGQG
EGEKRKEDEEVWRGWVEKVYLPRVAKEKKEGGDGRMRRSACRPCTRPTPL
SCYGTGSPRTRLRRPKNKTTPECASCSISFKTPTTTRKTGRRGRGRRGGG
GERRDGGTYEEV*

mRNA from alignment at chr20:660438..665604+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G02200.1 ID=NO20G02200.1|Name=NO20G02200.1|organism=Nannochloropsis oceanica|type=mRNA|length=5167bp|location=Sequence derived from alignment at chr20:660438..665604+ (Nannochloropsis oceanica)
CAGCCCAACCTCCCTTCCTCTCTACAAGCACACCTACACCCTCCCTCCAT
ACCACCTTCCGTACGTGTCGTGTATGCCTGGCGCCATTCATAGGGCCTCA
GGCACGCTGCTTTTGCCCCTTAAACTCGTCCTCTTCGCGGTCCTCGTCGC
TCGTGCTGCTTCCTCCCTCACCCCTTCTTTTCCTCCCTCCCGGCCATCGA
GACCGACGGCCAATAAGCACACACTGGCATTCACACGCCGCTTTTATACC
GTGGTGGCACGCCATCGAGCCTGCTACCTGCGCCCTATCACGAGCCACAC
TCGCTTTGCCAGCACTTTCCGTTCCTCCGTCCCCTCCTCGCCCGCCATGA
GCATTCGCACTTTATGTGCCGCTTCCACTACCACTGACGGTAGTAGCAGC
AGCACCAGTCCCTCTACTGCTGCTGCTGCTACTGCTGCTGTTGCTCCTTC
CTCGGAGAAGACATATACCCTGGAAACGCTCCCTTTTGACAACCTGGCCT
TGCACTCGTTGCCCGTCGACCCGCAGGCCGAGAATTTCGTCCGGCAAGTG
CCCAACAGCGTCTTCTCCCGCGTCAAGCCCGAGGTACGACGAGACGAAGA
ACATGTTAACATGTAATTATACATATAGAAGTAAAAATGCACGCAGACAG
ACCCAAAAGCAGCCACTCACACTTCTCCTCTCGTCGTGTCCCTTCCTTCC
TTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTCCTACCAGCCCGTCAAGAA
CCCGGTGCTTGTCGCCGCCTCCCCCAGCGCCCTGACAGACCTCCTCTCCC
TCGCCCCCTCCGAGCTTCAACGCACCGAGGACCTCGCCTCGTATTTTGGA
GGCAACCAACTCTTGCCTGGGAGTGAAACATACGCAAGCTGCTATGCTGG
ACATCAATTTGGCGCGTTTTCCGGACAGCTGGGGGATGGTGCGGCGATTT
CTCTGGGTAGGTCACGCTTTCCCTCCGTTCTCTCTCCCTCCCTCCCTCAA
TCCCTCTCTCCCTCTCTCCCTTCCGTCCTCCCTCCCTCCCTCCCTCAATC
CCTCCCTCAATCCCTCCCTCCCTCCCTTCACTGCACGTGGTTTCTCTGGG
TAGGTCATGCTTCCCTACCTCGTCCCCGTCCTCCCTCCCTCTCCCCCTCC
CTCCCTCCATCCCTCCCCCCTTCCCTCCCTCCATCCCTTGATTTCGGCAT
CCTCACCTTCCTTCGTTCCCTTCGTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCCCATTCCTTCTCCTCAGGCGAGGTGGTA
AACACCGAGGGGAAGCGGTTTGAAGTCCAGCTGAAGGGTGCGGGTCCCAC
GCCTTACTCGCGCAGGTAGGTAGGGAGGTAGGTAGGTAGGGAGGGAGGGA
GGGAGGGAAGGGGGTACCGAGGAAAGAGGGGAGGAAGGGAGGGGAGTATC
GACGAGAAGACATAAATATAATCTTTTATTTGGCATGCTCAATTTCTCTT
CTCCTCCCTCCCTCCCTCCTCCCTTCCTCCCTTTATGCAGGGCCGATGGA
CGTAAGGTCCTGCGTTCCTCCATCCGGGAGTTTTTGTGCTCAGAAGCGAT
GCATTTCCTCGGTGTGCCCACCACCCGTGCCGCCGCCCTCGTCACCAGCG
ATTCCCTCACACAACGAGGTAGATAACTCTCTCCCTCTTCCCTCTTCTCC
CTTCCTCTTTCAATCTCAGACATGTTTTACAACGACAACGATATGATCAA
CGACCGCTGCTTTGCCATGGTACGCCTCACCTATACCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTCAGACGTGTTC
TACAACGGCAACGTCATCAACGAACGCTGCTCCGTCGTGACGCGCCTGGC
CCCCTCCTTCCTCCGCTTCGGGTCATTCGAAGTAGTGAAGCCCAAGGATG
GGTATACTGGCAGGGCCGGACCTTCATCAGGGAATAAGGAATTGCTCAGG
TAGAAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAGGGAGGAAGGGAAGGA
GGGATAAAGGGAAGGGGGGAGGGAAGGGCGGATAGAGGGAAGAAGGAAGA
GCGGGATGATGACGGCCTTGTAGATTCCCCTCCACTTCGATCCTAATGAA
AAACATTGATTAAAAAAATTACAACGAATAAATTAATCACTAAATAAGCA
AATTAATATTAAATAATGTATGAATTAAGTAATAAACAAATGAATGTGAT
GGAATGAATAAACAAAATTTACTCATAAATAACATGTAAAATTGAATGTA
TTAACCAACAAATATTAAAAAGATAATAATAAATAAAATAAATTCATCTG
ATAAATAAAAAAGATAAATAAATTCAAATAATAAATAAAACATATTTTAC
ACTTCATTTTTCAGGCAGCTGCTGGACTACACCATCCAGACTTATTTCCC
TGAGCTTGGCAGCCTCGAGGACGACAAGGTACTCGCTTCCTCTCTCCTTC
CCTCCCTCCCTCCCTCCTCTCTATCTCCTTTCATTTTACGCCCCACCCAA
TCTCCAAGCGGAAGTTCGTCACACAAGTTCGTCGACCACCTTCCCTCCCT
CTCTCCCTCCCTCCCTCCCTCCCTCCCTCGCAGACCCAGCAATACCTCGC
CTTCTACACTGAGGTAATTAAGTCCACCGCGGCCCTCGTCGCCCACTGGC
AGGGCATCGGGTTCACGCATGGAGTCCTCAATACCGACAATATGAGTGTG
TTGGGCCTCACAATCGGTACGTGCCCTCCCTCCTTTCCTTTTTCCCTCCC
TCCCTCCTTCCCTTTTTCCCATTCGTCAAAACGACACACATGTGTCTTTT
CCCTCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCTCCCCAGACTAC
GGCCCATACGGCTTTCTGGATTTTTTCGACCCGGACTTCATTTCCAACGG
CAGCGATAACGGCGGTCGTTACTGCTACGGCAAGCAGCCAGGTAGGGAGG
GAGGGAGGGAGGGAGGGAGAGAGGGAGGAAGGGAAGGGAAGTGAGCGGGG
GAACAAAAAAAAAAACACTCCAATCAACCCTTCTCCTTTTTTACTTTCCC
TCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTCTTCCATAGAAATCTGTAA
GTGGAACTTGGAGAAATTCGCGGAATCTCTTTCCCTCCTCCTCCCCCTCG
ACCTCTCCCTCCCTCGTCTTGCCTCCCTCTACGACCTCGAGTATAGCCGT
GCTTATTCCCGCATAATGCATCAAAAGCTGGGCCTGAAGCAGGAGGGAGG
GACGGAGGGAGGGACGGAGGGAGGGGGGGAGGACGAGGTGGTTAGAGAGT
TGTTCAAGACGATGGAGGGGACGGCAGCTGACTTTACTATGACGTTCGTC
GAGCTGAGTCGGCTGGGAAGAGAGGGAGAGAACAAGGAGAAGGTGAGGAA
AGGAGGGAGGCAGGGAAGGAGGGAGGGAGGGAGGGAGAAAGGGAGGGAGG
GCGGCTTCAGTCCTGGCAGGGAAGAAAAAAGCATAATGAATGCGGATGTG
TTCCCCTCTTTCCCACTCACCTCCCTCCCTCCCTCCCTCCCTCCCACCCA
GATTATCAAGGCTTTGGCCTCTCACTGCGCACCTCCCTCTGTTGTTGCCG
CCGCCTTGACCAAGAAACTTCGCATCTCCCGCCCCACCATGTGAGGAGGG
AAGGGGGGAGGGAGGGAGGGAGGACGGGAGGAAGGGAGGAAGGGAGGGAG
AATTTGTTTTTGGGGCGGGGGGGGGAATCTGACCTTGCACTTTCTCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTACACTCTCGGTGTGAGAAACATCAC
AGCGCAAGGAGGAAATATCAATGCACTCCCCAAGTCCACACGCCCCTCCC
TCCCTCCCTCCCTCCTTCCCTCCCTCCCTTCCAGGCCGTCGGGACAGACA
CAGCAGCTCTGGGTCCTGGCGCAGCAGGACAAGAGCAAAATCGCTGAAAT
TTTTGGCGCCGAAAACGTCGACGCCGTCTGCCGCGAGCTGGAGGGCGAGA
TGGAAAAAATGCGGAAGGTGGAGTCGGTGGCACTGGCGATTGAGAAGAAC
AAAGGGCAGGGGGAGGGGGAGAAGAGGAAGGAGGACGAGGAGGTCTGGAG
GGGGTGGGTTGAAAAAGTGTATTTGCCGCGGGTGGCGAAGGAGAAGAAGG
AGGGGGGGGATGGAAGGATGAGAAGGAGCGCGTGCAGGTAGGGAGGAACC
GAAGAAGGAGGGGAGGGCGAGGGGCAAGGGGAGGGGGAGGGGGAGGGGGA
CAGGGGGAGGAAGGGAGGCTTCTTCGTATGGAGGGGGGGGGCAGTAGATG
GCGGGGGAGGGAGGGTGTCGAAGTGAGGGCAAGCAAAATGAGATTCACAG
CATGCCTCGGCAGCCGTCTTGTAAGAGCATCAAATAAGAAGCACTTCCTG
ACATTCAAAGTCCCCTCTTCCTCCCTTCCACTCTCCTCCCTCCCTCCCTC
CCTCCCTGCACCCCTCCCTCCCTCAGGCCATGCACAAGGCCAACCCCTCT
TTCGTGTTACGGAACTGGATCGCCCAGGACGCGATTGAGGCGGCCGAAAA
ACAAGACTACTCCCGAGTGCGCCTCGTGCTCGATCTCCTTCAAGACCCCT
ACTACTACCCGGAAGACCGGCCGAAGGGGGAGGGGGAGGAGGGGAGGGGG
AGGGGAAAGGAGGGATGGAGGAACTTACGAAGAGGTATAGGGGCATGACA
CCTGCGTGGGCGGCGGAGCTGGTGTGTACGTGTTCATCGTAAAGGGAGGG
AGGGAGGGAGGGGGAGAAGGAGAAAGATCAAATTTGAAGAAGGACAAGAT
GAAGTACGAAACAGATACATGCGTGCTTGTGCATGGATTTGAATGGAAAT
ATGTCCGCGCGGCCAAGGGAGATAAATGCATGCGCCCTAAGACTCATATA
TTGAGAGGGTGAAGACGAAGATGAAAGGGAGAATGGAAGCGACGAAGATC
AAAATAGACGAAAGATGGGTGTTGTGCCGAAACAAGCTACCGCCCAGGCC
GAGCATACCCGGACAAAGAAAAATGATGGAACAAGGACCAAAGCAAGTCC
AGAAGGAAAGGGAAAAT

Coding sequence (CDS) from alignment at chr20:660438..665604+

>NO20G02200.1 ID=NO20G02200.1|Name=NO20G02200.1|organism=Nannochloropsis oceanica|type=CDS|length=2289bp|location=Sequence derived from alignment at chr20:660438..665604+ (Nannochloropsis oceanica)
ATGCCTGGCGCCATTCATAGGGCCTCAGGCACGCTGCTTTTGCCCCTTAA
ACTCGTCCTCTTCGCGGTCCTCGTCGCTCGTGCTGCTTCCTCCCTCACCC
CTTCTTTTCCTCCCTCCCGGCCATCGAGACCGACGGCCAATAAGCACACA
CTGGCATTCACACGCCGCTTTTATACCGTGGTGGCACGCCATCGAGCCTG
CTACCTGCGCCCTATCACGAGCCACACTCGCTTTGCCAGCACTTTCCGTT
CCTCCGTCCCCTCCTCGCCCGCCATGAGCATTCGCACTTTATGTGCCGCT
TCCACTACCACTGACGGTAGTAGCAGCAGCACCAGTCCCTCTACTGCTGC
TGCTGCTACTGCTGCTGTTGCTCCTTCCTCGGAGAAGACATATACCCTGG
AAACGCTCCCTTTTGACAACCTGGCCTTGCACTCGTTGCCCGTCGACCCG
CAGGCCGAGAATTTCGTCCGGCAAGTGCCCAACAGCGTCTTCTCCCGCGT
CAAGCCCGAGCCCGTCAAGAACCCGGTGCTTGTCGCCGCCTCCCCCAGCG
CCCTGACAGACCTCCTCTCCCTCGCCCCCTCCGAGCTTCAACGCACCGAG
GACCTCGCCTCGTATTTTGGAGGCAACCAACTCTTGCCTGGGAGTGAAAC
ATACGCAAGCTGCTATGCTGGACATCAATTTGGCGCGTTTTCCGGACAGC
TGGGGGATGGTGCGGCGATTTCTCTGGGCGAGGTGGTAAACACCGAGGGG
AAGCGGTTTGAAGTCCAGCTGAAGGGTGCGGGTCCCACGCCTTACTCGCG
CAGGGCCGATGGACGTAAGGTCCTGCGTTCCTCCATCCGGGAGTTTTTGT
GCTCAGAAGCGATGCATTTCCTCGGTGTGCCCACCACCCGTGCCGCCGCC
CTCGTCACCAGCGATTCCCTCACACAACGAGACGTGTTCTACAACGGCAA
CGTCATCAACGAACGCTGCTCCGTCGTGACGCGCCTGGCCCCCTCCTTCC
TCCGCTTCGGGTCATTCGAAGTAGTGAAGCCCAAGGATGGGTATACTGGC
AGGGCCGGACCTTCATCAGGGAATAAGGAATTGCTCAGGCAGCTGCTGGA
CTACACCATCCAGACTTATTTCCCTGAGCTTGGCAGCCTCGAGGACGACA
AGACCCAGCAATACCTCGCCTTCTACACTGAGGTAATTAAGTCCACCGCG
GCCCTCGTCGCCCACTGGCAGGGCATCGGGTTCACGCATGGAGTCCTCAA
TACCGACAATATGAGTGTGTTGGGCCTCACAATCGACTACGGCCCATACG
GCTTTCTGGATTTTTTCGACCCGGACTTCATTTCCAACGGCAGCGATAAC
GGCGGTCGTTACTGCTACGGCAAGCAGCCAGAAATCTGTAAGTGGAACTT
GGAGAAATTCGCGGAATCTCTTTCCCTCCTCCTCCCCCTCGACCTCTCCC
TCCCTCGTCTTGCCTCCCTCTACGACCTCGAGTATAGCCGTGCTTATTCC
CGCATAATGCATCAAAAGCTGGGCCTGAAGCAGGAGGGAGGGACGGAGGG
AGGGACGGAGGGAGGGGGGGAGGACGAGGTGGTTAGAGAGTTGTTCAAGA
CGATGGAGGGGACGGCAGCTGACTTTACTATGACGTTCGTCGAGCTGAGT
CGGCTGGGAAGAGAGGGAGAGAACAAGGAGAAGATTATCAAGGCTTTGGC
CTCTCACTGCGCACCTCCCTCTGTTGTTGCCGCCGCCTTGACCAAGAAAC
TTCGCATCTCCCGCCCCACCATGCCGTCGGGACAGACACAGCAGCTCTGG
GTCCTGGCGCAGCAGGACAAGAGCAAAATCGCTGAAATTTTTGGCGCCGA
AAACGTCGACGCCGTCTGCCGCGAGCTGGAGGGCGAGATGGAAAAAATGC
GGAAGGTGGAGTCGGTGGCACTGGCGATTGAGAAGAACAAAGGGCAGGGG
GAGGGGGAGAAGAGGAAGGAGGACGAGGAGGTCTGGAGGGGGTGGGTTGA
AAAAGTGTATTTGCCGCGGGTGGCGAAGGAGAAGAAGGAGGGGGGGGATG
GAAGGATGAGAAGGAGCGCGTGCAGGCCATGCACAAGGCCAACCCCTCTT
TCGTGTTACGGAACTGGATCGCCCAGGACGCGATTGAGGCGGCCGAAAAA
CAAGACTACTCCCGAGTGCGCCTCGTGCTCGATCTCCTTCAAGACCCCTA
CTACTACCCGGAAGACCGGCCGAAGGGGGAGGGGGAGGAGGGGAGGGGGA
GGGGAAAGGAGGGATGGAGGAACTTACGAAGAGGTATAG

Synonyms

Publications