NO20G01650.1, NO20G01650.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO20G01650.1
Unique NameNO20G01650.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3629
Alignment locationchr20:500863..504686 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:500863..504686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO20G01650.1 vs.
Match: XP_005852728.1 (hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]; EKU23101.1 hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 582.8 bits (1501), Expect = 2.400e-162
Identity = 337/547 (61.61%), Postives = 388/547 (70.93%), Query Frame = 0
Query:    1 MQHGKGKGGGFGRKGGADHVQSFKRLLQGKGQAKNGINDSSIFPGGQ-RRRIEFHKARKPQNGFISLSTPITSTNSSSSSN-NGLAAGSSSKK------SNARDVGAAAIGLPAPEKGLFPESKIRSLMSWVGVGRTGPGLYNLGNTCFLNATLQCLAYIPPLAQYFIEGGGSSLSLSSSMQRIP-----GGGGGGGGGG---GGWLGLVRDLIVNMHTGRGSGSDIGGGRAGGESSHRTHHHSHNHYHYHHQKQQQQQVSCREGSRSPISPKAIVGNLRALNKHFRVGRQEDAHEFLRHLIDALQNACLKIAKVKSNAGHRLAETTFVHRIFGGYLRSQVKCTGCGFASDTYDSFLDLSLEIHGKVGTLEEALARFTAVETLDKANRWRCSSCNHLVCAKKQLTVHTAPNVCTVQLKRFMFGSRSSKVGKGISYPEDLRLPVSGPERAAEYRLAGVLVHAGASVNMGHYFSFVKAGNGMWYEMDDSHVSQVGVQTVLRQHAYLLFYVKVVKPALPPFLPNFTGKRMAEMESGLKKEEKKKEKKKKK 532
            M+H   +GG  G +G  D VQSFKRLLQG G   +G ++   +  G+ RRRI+FHKARK +NGF+SLST  T     +S    G+ AG  + K      S A D  AAA GLP PEKG+FPESKI  LM+W+ V R GPGLYNLGNTCFLNATLQCLAY+PPLAQYF+             +R+P     G G G  GGG   GGWLGLVRDLI NMHTG G+G   GG R  G                         ++ REG RSPISPKAIVGNL+ALN+HFRVGRQEDAHEFLRHL+DALQ+ CL+ A+VKSNA  RLAETTFVHRIFGGYLRSQV+CT CG  S+TYD+FLDLSLEIHGKVG LEEALARFTAVETLD+ANRWRC +C+ LVCA+K+L+ HTAPNVCTVQLKRFMFGSRSSK+ K ++YPE LRL +SGPE +A YRLAGVLVHAGASVNMGHY+S VKA NG WYEMDD+ V QVG+ TVL QHAYLLFYVK V P+ PP L             G  +EEK+ EK+  K
Sbjct:    1 MKHRGQQGGLKGGRGTGD-VQSFKRLLQGPGN--DGAHNGQAWDIGKPRRRIKFHKARKVENGFVSLSTGTTKGPCPASGCLGGVVAGPLTGKKARERFSEAMDKDAAAPGLPTPEKGIFPESKIHPLMTWIRVERVGPGLYNLGNTCFLNATLQCLAYLPPLAQYFLS--------KKEEERVPSVLSPGAGQGHRGGGQARGGWLGLVRDLIANMHTGSGAG---GGDRGDG-------------------------LARREGGRSPISPKAIVGNLKALNRHFRVGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVK-VGPSPPPALD----------RRGRDEEEKEGEKRLAK 497          
The following BLAST results are available for this feature:
BLAST of NO20G01650.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005852728.12.400e-16261.61hypothetical protein NGA_0518320 [Nannochloropsis ... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01650NO20G01650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO20G01650.1NO20G01650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO20G01650.1.cds1NO20G01650.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G01650.1.cds2NO20G01650.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO20G01650.1 ID=NO20G01650.1|Name=NO20G01650.1|organism=Nannochloropsis oceanica|type=mRNA|length=3629bp
TACAGACAGGAAATTGAACGGCTCTTAAAAAACGCCAGCAAGATCCCATG
GATAACCTCCGGTAAGTCGCCAGGATAACCATCGATTAGCAGCCAGGCCC
GCGCTTTTCTTCGTAAAACATGCAGCACGGGAAAGGCAAAGGTGGAGGCT
TCGGAAGAAAGGGCGGCGCGGACCACGTGCAAAGTTTTAAGCGGCTGCTG
CAGGGTAAGGGGCAAGCAAAAAACGGAATCAACGACAGTAGCATCTTCCC
TGGTGGTCAGCGACGGCGCATCGAATTCCATAAGGCCCGCAAGCCCCAGA
ATGGCTTCATCTCCCTCTCCACCCCGATCACCTCCACCAACAGCAGCAGC
AGCAGCAATAACGGCCTCGCCGCCGGCTCGAGCTCCAAGAAATCTAATGC
CCGCGACGTAGGAGCGGCTGCCATAGGTTTACCAGCACCCGAAAAGGGCC
TCTTTCCCGAGTCAAAAATCCGCTCATTGATGTCTTGGGTCGGCGTGGGG
AGGACAGGGCCAGGGCTGTACAATCTGGGCAACACCTGCTTCCTCAATGC
GACCTTGCAATGCCTCGCATACATCCCCCCATTGGCTCAATATTTCATTG
AAGGAGGAGGGTCATCATTGTCATTGTCCTCGTCCATGCAGCGTATTCCA
GGTGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAGGGTGGCTAGGTCTCGT
GCGTGACTTGATCGTGAACATGCACACAGGCCGAGGAAGCGGCAGCGATA
TAGGAGGCGGACGAGCAGGAGGAGAGAGCAGCCATCGCACGCACCACCAC
AGTCATAATCATTACCACTATCATCACCAGAAGCAGCAGCAACAGCAGGT
CTCCTGCCGGGAAGGCTCCCGGAGCCCCATCTCCCCCAAGGCGATCGTCG
GCAACCTCAGAGCTCTGAATAAACACTTTCGGGTAGGCCGTCAAGAAGAC
GCGCATGAATTTCTCCGGCACCTTATCGATGCCCTGCAGAATGCGTGCTT
GAAAATCGCCAAGGTCAAGAGCAATGCTGGCCACCGGCTGGCGGAAACGA
CGTTTGTGCACCGGATTTTCGGCGGGTATCTCCGATCGCAGGTCAAGTGT
ACGGGTTGTGGGTTTGCTAGTGACACGTACGACAGCTTTTTGGATTTGTC
GTTGGAGATTCATGGGAAGGTGGGGACCTTGGAGGAGGCCTTGGCCCGGT
TCACGGCCGTGGAGACCCTGGACAAGGCGAACCGGTGGAGGTGCTCGAGT
TGTAACCATCTGGTGTGTGCCAAGAAGCAGCTGACAGTGCACACAGCGCC
AAATGTGTGTACTGTCCAATTGAAGCGGTTCATGTTTGGCTCCCGAAGCT
CCAAGGTAGGTAAGGGGATCAGCTACCCCGAGGACTTGCGCCTGCCTGTC
TCGGGGCCCGAGCGCGCGGCCGAGTACCGACTGGCCGGCGTGTTGGTGCA
CGCGGGGGCGAGTGTGAATATGGGTCACTATTTCTCCTTTGTTAAGGCGG
GGAATGGCATGTGGTACGAGATGGATGACTCGCACGTGTCGCAGGTAGGG
GTGCAGACCGTGTTGAGGCAGCACGCCTACCTTCTGTTTTACGTCAAGGT
CGTCAAACCCGCCCTCCCTCCCTTCCTCCCTAATTTTACGGGAAAGAGAA
TGGCGGAGATGGAATCGGGATTAAAAAAGGAAGAGAAGAAGAAGGAGAAG
AAGAAAAAGAAGGAGGAGGAGGACGACGTAGGGAAGGTGATGACTAAGAA
GGAGAGGAAGGAGGAGAAGAAGGAGAAGAAGAAGGTGGCAGACAAGTCCA
AGAGAAGAGCCGAGGCCAAGGAAGAGGAACAGAAGCAAGCCGCCGCCACC
ACTGCTACAGCAGCAGCAGCAGGGACCACCACCAGCACTACTACTGCCAT
TAGCAGTATTTGTAGCAGCAACAGCAGCAACAGTATTGTGGAGCAAAGGC
TGGCCACCCCAGGGTGGAGCCAAGTGTTGGCGAAGATGAGAGAAGAAGAC
GCCCGAGCAGAAGACCCTACCAAGGATTTTATGGTCGGTTTGAGGGGGAA
GGGGGGAAGGGAGGAAGACGAAGCGGGAAGACTGCTGAGCATGGTAGACC
ATTCGTGGGCGCAATGTAAGGACTTGGCGATGTTCATGCAACAGGCACGG
GATGCGGAGGGAGGGAGGAAGGGGTGGAAGGAACGAGAGAGGGGCGATGA
TAAAAAAGGGGAGAAGGAGAAAGATAACTCAGGAATACAGCAGCAACAGG
TTGGTGGTGATCTGAAGATGAAAGAAGAGAGAGAAGAAGAGGAGGAGGAG
AACGCGGCCGAGAAAGGAGAGTCTTCCTCGTCTTCCTCCTCGTCTTCCTC
CTCCTCTTCTTCTCCTTCTGTGGGCAACACCACCGATGGCGATGATGCCG
ACGACCCCTACGATTCCTCCGCTTCAATCTCCTCCCCTTCCTCCGTCTCC
TCCTCCTCATCAAGCACCTCCTCTTTCATTCCTGCCCTCGATATGGGTAA
AATTGTCCTGGGTTATAATTTCGCAGGCAAGTTTTTCCGGACCCGCTTCT
CACGTCGACGATGGCAACGGACTTTTTCTCCCTGGGCACGGCATCAGCGG
GAGGAGAAGGCTGCCCTTTCAGGGGAGAGGTGGGGAGAGGAGGGGGAGGA
GGAGGAGGAAGGGGGTTCAGAGGTGGAGGAGGGAGGAAGGAAGAGTGACA
AGAAGCTGAAGGAAAGTAAGGCCAAGCAAGGGATAGCAGCGGAGAGTGCT
GTTGTCAAGATGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGCAAGAATGCAAAGACGAAGAGACGG
AGATTCATATTGATGGAAAAGAGGAGCTGAAGACGGCAGATCTTATTGAA
ATAGGTCGTAAATCACACATGCCGAGAAGCAGCAGCGGCAGCAGCAGCAG
CACGGGCGCGATGCCCTCATCTTCTTCGTCCTCCATTTCTTCTTCTTTCG
ATTCCACCACTGCAACTGCGGTCGCAACCTCCAGGGCCAAAAAAGAGAAA
AGGACAGAAAACCCTGGACAAAGAGTGCTGCGACGGGATGAGGAAGCAAT
CGTGATGGTGCCACGATCTTTTCGAGGAGGAGGAGAGAAAAGGGAGGAAA
GCAGGAAGAGGCAATTCGATCCCCGGGCGCTGCGAGCGATGAAGGATGCT
TCTTTGAGTGATCTAGTTGGACAGTGGGACAACATGGACGAAGAGGAAGC
AGCAGTCACCAAGGAGATGAATGAGGCACGAGACAAGGTCATCGCACAAA
CCAAGCGAGAGGAGAGAGTCCAGCGAGGTAAGAGGCAGCTTAGTGAGTAT
GCAGCGGCGGTCGTGGCCGGGAAGAAGAAGAAAGTCAAGGGACAAAAGGA
GGGCGGGGAGGTATACGAGATTTTTGAGCATAGTGGCGGTGGTGATGGCG
GAAAAAATAAAAGTAACCCGTTCGAGACGCGACAGATGGAGCTGCAGGAG
CGAAAGAGGGGACCGGGGTCAGCTCCGGTGGGTGGAAACACAAGGGGAAG
AGGGACACGAAGGGACAGGCCCTTGCAGTCGTAGTAGACAGAAGAAAGAT
GAAGAACCGCTAGAAGGGGGAAAAGTTAA
back to top

protein sequence of NO20G01650.1

>NO20G01650.1-protein ID=NO20G01650.1-protein|Name=NO20G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1155bp
MQHGKGKGGGFGRKGGADHVQSFKRLLQGKGQAKNGINDSSIFPGGQRRR
IEFHKARKPQNGFISLSTPITSTNSSSSSNNGLAAGSSSKKSNARDVGAA
AIGLPAPEKGLFPESKIRSLMSWVGVGRTGPGLYNLGNTCFLNATLQCLA
YIPPLAQYFIEGGGSSLSLSSSMQRIPGGGGGGGGGGGGWLGLVRDLIVN
MHTGRGSGSDIGGGRAGGESSHRTHHHSHNHYHYHHQKQQQQQVSCREGS
RSPISPKAIVGNLRALNKHFRVGRQEDAHEFLRHLIDALQNACLKIAKVK
SNAGHRLAETTFVHRIFGGYLRSQVKCTGCGFASDTYDSFLDLSLEIHGK
VGTLEEALARFTAVETLDKANRWRCSSCNHLVCAKKQLTVHTAPNVCTVQ
LKRFMFGSRSSKVGKGISYPEDLRLPVSGPERAAEYRLAGVLVHAGASVN
MGHYFSFVKAGNGMWYEMDDSHVSQVGVQTVLRQHAYLLFYVKVVKPALP
PFLPNFTGKRMAEMESGLKKEEKKKEKKKKKEEEDDVGKVMTKKERKEEK
KEKKKVADKSKRRAEAKEEEQKQAAATTATAAAAGTTTSTTTAISSICSS
NSSNSIVEQRLATPGWSQVLAKMREEDARAEDPTKDFMVGLRGKGGREED
EAGRLLSMVDHSWAQCKDLAMFMQQARDAEGGRKGWKERERGDDKKGEKE
KDNSGIQQQQVGGDLKMKEEREEEEEENAAEKGESSSSSSSSSSSSSSPS
VGNTTDGDDADDPYDSSASISSPSSVSSSSSSTSSFIPALDMGKIVLGYN
FAGKFFRTRFSRRRWQRTFSPWARHQREEKAALSGERWGEEGEEEEEGGS
EVEEGGRKSDKKLKESKAKQGIAAESAVVKMKEEEEEEEEEEEEEEEEEE
EEQECKDEETEIHIDGKEELKTADLIEIGRKSHMPRSSSGSSSSTGAMPS
SSSSSISSSFDSTTATAVATSRAKKEKRTENPGQRVLRRDEEAIVMVPRS
FRGGGEKREESRKRQFDPRALRAMKDASLSDLVGQWDNMDEEEAAVTKEM
NEARDKVIAQTKREERVQRGKRQLSEYAAAVVAGKKKKVKGQKEGGEVYE
IFEHSGGGDGGKNKSNPFETRQMELQERKRGPGSAPVGGNTRGRGTRRDR
PLQS*
back to top

mRNA from alignment at chr20:500863..504686+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO20G01650.1 ID=NO20G01650.1|Name=NO20G01650.1|organism=Nannochloropsis oceanica|type=mRNA|length=3824bp|location=Sequence derived from alignment at chr20:500863..504686+ (Nannochloropsis oceanica)
TACAGACAGGAAATTGAACGGCTCTTAAAAAACGCCAGCAAGATCCCATG GATAACCTCCGGTAAGTCGCCAGGATAACCATCGATTAGCAGCCAGGCCC GCGCTTTTCTTCGTAAAACATGCAGCACGGGAAAGGCAAAGGTGGAGGCT TCGGAAGAAAGGGCGGCGCGGACCACGTGCAAAGTTTTAAGCGGCTGCTG CAGGGTAAGGGGCAAGCAAAAAACGGAATCAACGACAGTAGCATCTTCCC TGGTGGTCAGCGACGGCGCATCGAATTCCATAAGGCCCGCAAGCCCCAGA ATGGCTTCATCTCCCTCTCCACCCCGATCACCTCCACCAACAGCAGCAGC AGCAGCAATAACGGCCTCGCCGCCGGCTCGAGCTCCAAGAAATCTAATGC CCGCGACGTAGGAGCGGCTGCCATAGGTTTACCAGCACCCGAAAAGGGCC TCTTTCCCGAGTCAAAAATCCGCTCATTGATGTCTTGGGTCGGCGTGGGG AGGACAGGGCCAGGGCTGTACAATCTGGGCAACACCTGCTTCCTCAATGC GACCTTGCAATGCCTCGCATACATCCCCCCATTGGCTCAATATTTCATTG AAGGAGGAGGGTCATCATTGTCATTGTCCTCGTCCATGCAGCGTATTCCA GGTGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAGGGTGGCTAGGTCTCGT GCGTGACTTGATCGTGAACATGCACACAGGCCGAGGAAGCGGCAGCGATA TAGGAGGCGGACGAGCAGGAGGAGAGAGCAGCCATCGCACGCACCACCAC AGTCATAATCATTACCACTATCATCACCAGAAGCAGCAGCAACAGCAGGT CTCCTGCCGGGAAGGCTCCCGGAGCCCCATCTCCCCCAAGGCGATCGTCG GCAACCTCAGAGCTCTGAATAAACACTTTCGGGTAGGCCGTCAAGAAGAC GCGCATGAATTTCTCCGGCACCTTATCGATGCCCTGCAGAATGCGTGCTT GAAAATCGCCAAGGTCAAGAGCAATGCTGGCCACCGGCTGGCGGAAACGA CGTTTGTGCACCGGATTTTCGGCGGGTATCTCCGATCGCAGGTCAAGTGT ACGGGTTGTGGGTTTGCTAGTGACACGTACGACAGCTTTTTGGATTTGTC GTTGGAGATTCATGGGAAGGTGGGGACCTTGGAGGAGGCCTTGGCCCGGT TCACGGCCGTGGAGACCCTGGACAAGGCGAACCGGTGGAGGTGCTCGAGT TGTAACCATCTGGTGTGTGCCAAGAAGCAGCTGACAGTGCACACAGCGCC AAATGTGTGTACTGTCCAATTGAAGCGGTTCATGTTTGGCTCCCGAAGCT CCAAGGTAGGTAAGGGGATCAGCTACCCCGAGGACTTGCGCCTGCCTGTC TCGGGGCCCGAGCGCGCGGCCGAGTACCGACTGGCCGGCGTGTTGGTGCA CGCGGGGGCGAGTGTGAATATGGGTCACTATTTCTCCTTTGTTAAGGCGG GGAATGGCATGTGGTACGAGATGGATGACTCGCACGTGTCGCAGGTAGGG GTGCAGACCGTGTTGAGGCAGCACGCCTACCTTCTGTTTTACGTCAAGGT CGTCAAACCCGCCCTCCCTCCCTTCCTCCCTAATTTTACGGGAAAGAGAA TGGCGGAGATGGAATCGGGATTAAAAAAGGAAGAGAAGAAGAAGGAGAAG AAGAAAAAGAAGGAGGAGGAGGACGACGTAGGGAAGGTGATGACTAAGAA GGAGAGGAAGGAGGAGAAGAAGGAGAAGAAGAAGGTGGCAGACAAGTCCA AGAGAAGAGCCGAGGCCAAGGAAGAGGAACAGAAGCAAGCCGCCGCCACC ACTGCTACAGCAGCAGCAGCAGGGACCACCACCAGCACTACTACTGCCAT TAGCAGTATTTGTAGCAGCAACAGCAGCAACAGTATTGTGGAGCAAAGGC TGGCCACCCCAGGGTGGAGCCAAGTGTTGGCGAAGATGAGAGAAGAAGAC GCCCGAGCAGAAGACCCTACCAAGGATTTTATGGTCGGTTTGAGGGGGAA GGGGGGAAGGGAGGAAGACGAAGCGGGAAGACTGCTGAGCATGGTAGACC ATTCGTGGGCGCAATGTAAGGACTTGGCGATGTTCATGCAACAGGCACGG GATGCGGAGGGAGGGAGGAAGGGGTGGAAGGAACGAGAGAGGGGCGATGA TAAAAAAGGGGAGAAGGAGAAAGATAACTCAGGAATACAGCAGCAACAGG TTGGTGGTGATCTGAAGATGAAAGAAGAGAGAGAAGAAGAGGAGGAGGAG AACGCGGCCGAGAAAGGAGAGTCTTCCTCGTCTTCCTCCTCGTCTTCCTC CTCCTCTTCTTCTCCTTCTGTGGGCAACACCACCGATGGCGATGATGCCG ACGACCCCTACGATTCCTCCGCTTCAATCTCCTCCCCTTCCTCCGTCTCC TCCTCCTCATCAAGCACCTCCTCTTTCATTCCTGCCCTCGATATGGGTAA AATTGTCCTGGGTTATAATTTCGCAGGCAAGTTTTTCCGGACCCGCTTCT CACGTCGACGATGGCAACGGACTTTTTCTCCCTGGGCACGGCATCAGCGG GAGGAGAAGGCTGCCCTTTCAGGGGAGAGGTGGGGAGAGGAGGGGGAGGA GGAGGAGGAAGGGGGTTCAGAGGTGGAGGAGGGAGGAAGGAAGAGTGACA AGAAGCTGAAGGAAAGTAAGGCCAAGCAAGGGATAGCAGCGGAGAGTGCT GTTGTCAAGATGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAGGAGGAGGAGGAGCAAGAATGCAAAGACGAAGAGACGG AGATTCATATTGATGGAAAAGAGGAGCTGAAGACGGCAGATCTTATTGAA ATAGGTCGTAAATCACACATGCCGAGAAGCAGCAGCGGCAGCAGCAGCAG CACGGGCGCGATGCCCTCATCTTCTTCGTCCTCCATTTCTTCTTCTTTCG ATTCCACCACTGCAACTGCGGTCGCAACCTCCAGGGCCAAAAAAGAGAAA AGGACAGAAAACCCTGGACAAAGAGTGCTGCGACGGGATGAGGAAGCAAT CGTGATGGTGCCACGATCTTTTCGAGGAGGAGGAGAGAAAAGGGAGGAAA GCAGGAAGAGGCAATTCGATCCCCGGGCGCTGCGAGCGATGAAGGATGCT TCTTTGAGTGATCTAGGTACGTAGTGGGGCAGGGAGAGGAGAAATTCAGG GCGTCAGCTATGTATTCATAGACCGAATGGATGAGAATAATCTATTTTCT TCACTTGGCCAGCGTGAGATACTCGAAGGACATGCGCATCGATTTATGCC TAATAGACACAAACTAATTTTTAACACTCTCACTTGCGACACTCCCATAC AACACACACAGTTGGACAGTGGGACAACATGGACGAAGAGGAAGCAGCAG TCACCAAGGAGATGAATGAGGCACGAGACAAGGTCATCGCACAAACCAAG CGAGAGGAGAGAGTCCAGCGAGGTAAGAGGCAGCTTAGTGAGTATGCAGC GGCGGTCGTGGCCGGGAAGAAGAAGAAAGTCAAGGGACAAAAGGAGGGCG GGGAGGTATACGAGATTTTTGAGCATAGTGGCGGTGGTGATGGCGGAAAA AATAAAAGTAACCCGTTCGAGACGCGACAGATGGAGCTGCAGGAGCGAAA GAGGGGACCGGGGTCAGCTCCGGTGGGTGGAAACACAAGGGGAAGAGGGA CACGAAGGGACAGGCCCTTGCAGTCGTAGTAGACAGAAGAAAGATGAAGA ACCGCTAGAAGGGGGAAAAGTTAA
back to top

Coding sequence (CDS) from alignment at chr20:500863..504686+

>NO20G01650.1 ID=NO20G01650.1|Name=NO20G01650.1|organism=Nannochloropsis oceanica|type=CDS|length=3465bp|location=Sequence derived from alignment at chr20:500863..504686+ (Nannochloropsis oceanica)
ATGCAGCACGGGAAAGGCAAAGGTGGAGGCTTCGGAAGAAAGGGCGGCGC
GGACCACGTGCAAAGTTTTAAGCGGCTGCTGCAGGGTAAGGGGCAAGCAA
AAAACGGAATCAACGACAGTAGCATCTTCCCTGGTGGTCAGCGACGGCGC
ATCGAATTCCATAAGGCCCGCAAGCCCCAGAATGGCTTCATCTCCCTCTC
CACCCCGATCACCTCCACCAACAGCAGCAGCAGCAGCAATAACGGCCTCG
CCGCCGGCTCGAGCTCCAAGAAATCTAATGCCCGCGACGTAGGAGCGGCT
GCCATAGGTTTACCAGCACCCGAAAAGGGCCTCTTTCCCGAGTCAAAAAT
CCGCTCATTGATGTCTTGGGTCGGCGTGGGGAGGACAGGGCCAGGGCTGT
ACAATCTGGGCAACACCTGCTTCCTCAATGCGACCTTGCAATGCCTCGCA
TACATCCCCCCATTGGCTCAATATTTCATTGAAGGAGGAGGGTCATCATT
GTCATTGTCCTCGTCCATGCAGCGTATTCCAGGTGGAGGTGGTGGAGGAG
GAGGAGGAGGAGGAGGGTGGCTAGGTCTCGTGCGTGACTTGATCGTGAAC
ATGCACACAGGCCGAGGAAGCGGCAGCGATATAGGAGGCGGACGAGCAGG
AGGAGAGAGCAGCCATCGCACGCACCACCACAGTCATAATCATTACCACT
ATCATCACCAGAAGCAGCAGCAACAGCAGGTCTCCTGCCGGGAAGGCTCC
CGGAGCCCCATCTCCCCCAAGGCGATCGTCGGCAACCTCAGAGCTCTGAA
TAAACACTTTCGGGTAGGCCGTCAAGAAGACGCGCATGAATTTCTCCGGC
ACCTTATCGATGCCCTGCAGAATGCGTGCTTGAAAATCGCCAAGGTCAAG
AGCAATGCTGGCCACCGGCTGGCGGAAACGACGTTTGTGCACCGGATTTT
CGGCGGGTATCTCCGATCGCAGGTCAAGTGTACGGGTTGTGGGTTTGCTA
GTGACACGTACGACAGCTTTTTGGATTTGTCGTTGGAGATTCATGGGAAG
GTGGGGACCTTGGAGGAGGCCTTGGCCCGGTTCACGGCCGTGGAGACCCT
GGACAAGGCGAACCGGTGGAGGTGCTCGAGTTGTAACCATCTGGTGTGTG
CCAAGAAGCAGCTGACAGTGCACACAGCGCCAAATGTGTGTACTGTCCAA
TTGAAGCGGTTCATGTTTGGCTCCCGAAGCTCCAAGGTAGGTAAGGGGAT
CAGCTACCCCGAGGACTTGCGCCTGCCTGTCTCGGGGCCCGAGCGCGCGG
CCGAGTACCGACTGGCCGGCGTGTTGGTGCACGCGGGGGCGAGTGTGAAT
ATGGGTCACTATTTCTCCTTTGTTAAGGCGGGGAATGGCATGTGGTACGA
GATGGATGACTCGCACGTGTCGCAGGTAGGGGTGCAGACCGTGTTGAGGC
AGCACGCCTACCTTCTGTTTTACGTCAAGGTCGTCAAACCCGCCCTCCCT
CCCTTCCTCCCTAATTTTACGGGAAAGAGAATGGCGGAGATGGAATCGGG
ATTAAAAAAGGAAGAGAAGAAGAAGGAGAAGAAGAAAAAGAAGGAGGAGG
AGGACGACGTAGGGAAGGTGATGACTAAGAAGGAGAGGAAGGAGGAGAAG
AAGGAGAAGAAGAAGGTGGCAGACAAGTCCAAGAGAAGAGCCGAGGCCAA
GGAAGAGGAACAGAAGCAAGCCGCCGCCACCACTGCTACAGCAGCAGCAG
CAGGGACCACCACCAGCACTACTACTGCCATTAGCAGTATTTGTAGCAGC
AACAGCAGCAACAGTATTGTGGAGCAAAGGCTGGCCACCCCAGGGTGGAG
CCAAGTGTTGGCGAAGATGAGAGAAGAAGACGCCCGAGCAGAAGACCCTA
CCAAGGATTTTATGGTCGGTTTGAGGGGGAAGGGGGGAAGGGAGGAAGAC
GAAGCGGGAAGACTGCTGAGCATGGTAGACCATTCGTGGGCGCAATGTAA
GGACTTGGCGATGTTCATGCAACAGGCACGGGATGCGGAGGGAGGGAGGA
AGGGGTGGAAGGAACGAGAGAGGGGCGATGATAAAAAAGGGGAGAAGGAG
AAAGATAACTCAGGAATACAGCAGCAACAGGTTGGTGGTGATCTGAAGAT
GAAAGAAGAGAGAGAAGAAGAGGAGGAGGAGAACGCGGCCGAGAAAGGAG
AGTCTTCCTCGTCTTCCTCCTCGTCTTCCTCCTCCTCTTCTTCTCCTTCT
GTGGGCAACACCACCGATGGCGATGATGCCGACGACCCCTACGATTCCTC
CGCTTCAATCTCCTCCCCTTCCTCCGTCTCCTCCTCCTCATCAAGCACCT
CCTCTTTCATTCCTGCCCTCGATATGGGTAAAATTGTCCTGGGTTATAAT
TTCGCAGGCAAGTTTTTCCGGACCCGCTTCTCACGTCGACGATGGCAACG
GACTTTTTCTCCCTGGGCACGGCATCAGCGGGAGGAGAAGGCTGCCCTTT
CAGGGGAGAGGTGGGGAGAGGAGGGGGAGGAGGAGGAGGAAGGGGGTTCA
GAGGTGGAGGAGGGAGGAAGGAAGAGTGACAAGAAGCTGAAGGAAAGTAA
GGCCAAGCAAGGGATAGCAGCGGAGAGTGCTGTTGTCAAGATGAAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGCAAGAATGCAAAGACGAAGAGACGGAGATTCATATTGATGGAAA
AGAGGAGCTGAAGACGGCAGATCTTATTGAAATAGGTCGTAAATCACACA
TGCCGAGAAGCAGCAGCGGCAGCAGCAGCAGCACGGGCGCGATGCCCTCA
TCTTCTTCGTCCTCCATTTCTTCTTCTTTCGATTCCACCACTGCAACTGC
GGTCGCAACCTCCAGGGCCAAAAAAGAGAAAAGGACAGAAAACCCTGGAC
AAAGAGTGCTGCGACGGGATGAGGAAGCAATCGTGATGGTGCCACGATCT
TTTCGAGGAGGAGGAGAGAAAAGGGAGGAAAGCAGGAAGAGGCAATTCGA
TCCCCGGGCGCTGCGAGCGATGAAGGATGCTTCTTTGAGTGATCTAGTTG
GACAGTGGGACAACATGGACGAAGAGGAAGCAGCAGTCACCAAGGAGATG
AATGAGGCACGAGACAAGGTCATCGCACAAACCAAGCGAGAGGAGAGAGT
CCAGCGAGGTAAGAGGCAGCTTAGTGAGTATGCAGCGGCGGTCGTGGCCG
GGAAGAAGAAGAAAGTCAAGGGACAAAAGGAGGGCGGGGAGGTATACGAG
ATTTTTGAGCATAGTGGCGGTGGTGATGGCGGAAAAAATAAAAGTAACCC
GTTCGAGACGCGACAGATGGAGCTGCAGGAGCGAAAGAGGGGACCGGGGT
CAGCTCCGGTGGGTGGAAACACAAGGGGAAGAGGGACACGAAGGGACAGG
CCCTTGCAGTCGTAG
back to top
Synonyms
Publications