NO20G00690.1, NO20G00690.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00690.1
Unique Name	NO20G00690.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2816
Alignment location	chr20:232088..237478 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:232088..237478 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO20G00690.1 vs.
Match: XP_005854200.1 (2 -phosphodiesterase 12-like protein [Nannochloropsis gaditana CCMP526]; EKU22164.1 2 -phosphodiesterase 12-like protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 356.3 bits (913), Expect = 2.700e-94
Identity = 216/411 (52.55%), Postives = 255/411 (62.04%), Query Frame = 0

Query:  477 LLSYNADMTCLQEVDERVFRDLLSPILSASGLRGFFLSKCGGTREGAAFFYRTERLSCLATHRVVMREAFQKEDSPFKALQARYPSLRTILQEKLTTVGQIVLLRLKAVDGDGRDTLLLVGNTHLFYHPKAQHIRLMQMATLLREMEAHQARAEEEYGISPRLVVCGDLNSTPHTATIRYLTGETISPGDEVWKWINAFGWGKRQGEAGEEPVGTAAGVTAVGAAAGGKEVEEEEEEEVEERDLDADVAEKINAGQSSARMVPKEGGKQGAGEE-------EEEEEEEEEEEEEEEEEEGGVFVPDATVIPSLSLARPFISACGFPDFTNYVQGFVETLDYIFLQSSTATTPTAAAAATATVPATPVAPADFSVLSVAAMPTREEAGADTALPSWQTPSDHVSIMCDVQLK 881
            +LSY+ D+ CLQEVDERVFR+LLSP+L +SGL GF  SKCG TREGAA FYR ERL+C+ T    MREAF ++D+PFK LQ RYP+LR IL EKLTTVGQIVLLRL                               +MATL+REM A Q   E+++G+ PRLV+CGDLNSTP TATIRYL GETI P DEVW+ ++ FGWGKRQGE  E+  G AA   AV  A  GK+  EE                         + V  + G++  G E           E  EE+E+E+  +E G    D  VIP+L L RPF SACG PDFTNYVQGFVETLDYIFL+S             A VP  P + A FSVLSV AMPTREEAG DTALPSWQ PSDHVSI+CDV+++
Sbjct:    1 MLSYSPDLVCLQEVDERVFRELLSPVLLSSGLAGFHHSKCGNTREGAALFYRLERLACMGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRL-------------------------------EMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEE---------------------GGDGKAVAVDDGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESE------------APVPLDP-SGASFSVLSVGAMPTREEAGQDTALPSWQAPSDHVSILCDVRVQ 346

The following BLAST results are available for this feature:

BLAST of NO20G00690.1 vs.

BLAST of NO20G00690.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854200.1	2.700e-94	52.55	2 -phosphodiesterase 12-like protein [Nannochlorop...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G00690	NO20G00690	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00690.1	NO20G00690.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00690.1.cds1	NO20G00690.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds2	NO20G00690.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds3	NO20G00690.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds4	NO20G00690.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds5	NO20G00690.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds6	NO20G00690.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds7	NO20G00690.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds8	NO20G00690.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds9	NO20G00690.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds10	NO20G00690.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds11	NO20G00690.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds12	NO20G00690.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds13	NO20G00690.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds14	NO20G00690.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00690.1.cds15	NO20G00690.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:232088..237478-
coding sequence from alignment at chr20:232088..237478-

mRNA sequence

>NO20G00690.1 ID=NO20G00690.1|Name=NO20G00690.1|organism=Nannochloropsis oceanica|type=mRNA|length=2816bp
AACAAGCACAGGGAGGACTAAACGGTAACGAAGCAGCAGCAGCAGTAGTA
GCAGCAACATCAGTCTCGGTTGAACCGCCTGGTATGCCCACCAGCGGCCG
CCGCGAGCCTCACTCCAACCCATTACCACCATTGCCACTGCTGCTTCTAG
CTGCCTTCTTTCTGTGTAGCACTGCCTTTCACGCGCCATCGACCCTTCGT
TTCTCACATCCGTCTTGTTCATCGCTCGCTGCTACTTCCGCTGCCACCAC
CGTCGCAGCGTCTCCCAGTAGCAGCATCATTCCCACCCCCACCTGCACTA
CCACCACTACCACCACCAGCAGCAGCAGAAGCAGCAGCAGCAGTCGCAGC
AGCAAACGGAAGAAGCACCCGTCCGCCCGTCAAAACCGGGAGCCAAAAGG
GGACCAAGGCCGCGTGGAGCGACAGGCTAATCACATGGACCAGCTGCACA
TCCGGAACGTGGCAGACGAGGCGGAGATCGAACTGACCTTCTTCGATGTG
GATGGAAAGCTGTGTCAACTTCGTCGTGCACGGACTGAGACAGCAGGAGC
GACATTACGGCGATTTGGGGCCAAGGTGGTGGGGAGTGGTGGCGGCGGTG
GAGGAAAAGGAGGGAAGGGTGGCAAGAAGCAAGGAAAGAAGAATGTAATT
GGGATGCAAGCGCAGCTGCACATGAAGCTGTTGGATGGAACGAGTGAGCT
GAACGTGGAGGAGATGAGTGTAGCCGATGCATGGGCCGATGGGCGAGAGC
TTTGGGTCCTGCGGGGCGCACAGGGCGTGGCTGAGTGGGAGGGAAGGGAG
GAGGGAGGGAAGGAGGAAGGGGAGGGAGGACGGCGGTACGTGCTGAGGTA
TCGAGTGAGGGTAAATCCACCTCACATCACCGAGCTGCGATTTTCGAGCA
AATTAATCATGGCTGGCTTCCCAGTGAACGTCCTGGCCCGTACACTCTTC
GCAGACGGCGTCAACTATCGGTGGCAGGTGGAGAGGGAGGATAAATGGAC
TCCATTCGACCCCACCGATGAGGCGGGCCCAGATACTCCTGTCGTTTACC
CCTCCCTCCCTCCCTCCCTTCCTTCCTCTTCCTCCTCCTCCCACCACCAC
CTCCACCACGTGGGCTGTCGGATGCGAGTGCTGTGTACGCCGTACCGACA
TCAGCCGCAGCAACAAGCGCAACGGGAGGAGGGGGCCAAAGGAGGGGAGA
AAAAAGGACAAGACGAAAGGGAGGACGAGGAAGCAGTCGTCTGGGGGAGG
ACCATTACCTGCTACACCAGCAAGGCCGTCACTTCTCCCTCCTCTCCCTC
CCTCACCCCTTGGCTGACACGCCTCCGGGTGCCTCTTCCACTGGAGCGCC
TGGAGCGGACCAGGAGGGAGGAGAGGGTGTTAAGGCTCGTGTCTTACAAT
ATCCTGGCCGACAACTACGCGACTTCTGCTTGGTCACAGAAGCACCTGTA
TCCCTATGTGCATCCCTCCCATCTTCACTCCGAATATCGGACGCTCCTCA
CCGTGAAAGAGCTCTTGTCGTATAATGCAGACATGACCTGCTTGCAAGAG
GTGGACGAGCGCGTCTTTCGAGACCTTCTCTCTCCCATCCTCTCGGCTTC
GGGCCTTCGCGGTTTTTTCCTTTCCAAGTGCGGAGGGACAAGGGAAGGAG
CCGCATTCTTCTATAGGACGGAACGGCTGTCGTGCCTCGCTACCCACCGG
GTTGTCATGCGCGAGGCTTTTCAAAAGGAAGATTCGCCCTTCAAGGCCCT
TCAAGCCCGCTACCCATCCCTCCGTACCATCCTCCAGGAGAAACTCACAA
CCGTCGGACAGATTGTGTTGCTGCGCCTCAAGGCGGTAGACGGGGATGGA
CGAGACACACTCCTCCTGGTGGGCAACACGCATTTATTCTATCACCCCAA
GGCACAGCACATCCGCCTGATGCAGATGGCCACCCTTCTGAGGGAAATGG
AAGCTCATCAAGCCCGGGCGGAGGAGGAGTACGGCATCTCCCCGCGCCTG
GTCGTGTGCGGAGATCTGAACAGCACCCCGCACACAGCCACCATTCGGTA
CCTGACTGGGGAAACTATTTCCCCTGGTGACGAGGTCTGGAAGTGGATTA
ATGCCTTCGGGTGGGGGAAGCGGCAGGGGGAGGCGGGAGAAGAGCCGGTG
GGGACAGCAGCAGGAGTAACGGCTGTCGGAGCAGCTGCAGGAGGGAAGGA
GGTGGAGGAGGAGGAGGAGGAAGAGGTAGAAGAAAGGGACCTGGACGCAG
ATGTAGCCGAGAAGATTAATGCAGGTCAAAGTAGCGCCAGGATGGTGCCA
AAAGAAGGCGGGAAGCAGGGGGCAGGGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGCGTGTTTG
TGCCCGATGCCACTGTCATTCCCTCCTTGTCCCTTGCGCGGCCTTTCATC
TCTGCGTGTGGTTTCCCTGACTTTACCAATTACGTGCAGGGCTTCGTCGA
GACCCTGGACTACATCTTCCTTCAATCATCCACCGCCACTACACCTACTG
CTGCTGCTGCTGCTACAGCTACAGTTCCTGCTACTCCTGTTGCTCCTGCA
GATTTTTCCGTCCTTTCCGTGGCGGCTATGCCAACGCGGGAGGAAGCAGG
GGCTGACACCGCCCTGCCCTCCTGGCAAACCCCCTCGGACCACGTCAGCA
TTATGTGCGACGTGCAATTAAAGTAGAGGGAGGGAGGGAGGGAGGGAGGG
GGAGAGGGAAGCTTACGTAGGTAGATGGGATATGTGGGCGGCCAAAGCCC
CCAAAAATGAAAGCGA

protein sequence of NO20G00690.1

>NO20G00690.1-protein ID=NO20G00690.1-protein|Name=NO20G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=881bp
MPTSGRREPHSNPLPPLPLLLLAAFFLCSTAFHAPSTLRFSHPSCSSLAA
TSAATTVAASPSSSIIPTPTCTTTTTTTSSSRSSSSSRSSKRKKHPSARQ
NREPKGDQGRVERQANHMDQLHIRNVADEAEIELTFFDVDGKLCQLRRAR
TETAGATLRRFGAKVVGSGGGGGGKGGKGGKKQGKKNVIGMQAQLHMKLL
DGTSELNVEEMSVADAWADGRELWVLRGAQGVAEWEGREEGGKEEGEGGR
RYVLRYRVRVNPPHITELRFSSKLIMAGFPVNVLARTLFADGVNYRWQVE
REDKWTPFDPTDEAGPDTPVVYPSLPPSLPSSSSSSHHHLHHVGCRMRVL
CTPYRHQPQQQAQREEGAKGGEKKGQDEREDEEAVVWGRTITCYTSKAVT
SPSSPSLTPWLTRLRVPLPLERLERTRREERVLRLVSYNILADNYATSAW
SQKHLYPYVHPSHLHSEYRTLLTVKELLSYNADMTCLQEVDERVFRDLLS
PILSASGLRGFFLSKCGGTREGAAFFYRTERLSCLATHRVVMREAFQKED
SPFKALQARYPSLRTILQEKLTTVGQIVLLRLKAVDGDGRDTLLLVGNTH
LFYHPKAQHIRLMQMATLLREMEAHQARAEEEYGISPRLVVCGDLNSTPH
TATIRYLTGETISPGDEVWKWINAFGWGKRQGEAGEEPVGTAAGVTAVGA
AAGGKEVEEEEEEEVEERDLDADVAEKINAGQSSARMVPKEGGKQGAGEE
EEEEEEEEEEEEEEEEEEGGVFVPDATVIPSLSLARPFISACGFPDFTNY
VQGFVETLDYIFLQSSTATTPTAAAAATATVPATPVAPADFSVLSVAAMP
TREEAGADTALPSWQTPSDHVSIMCDVQLK*

mRNA from alignment at chr20:232088..237478-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G00690.1 ID=NO20G00690.1|Name=NO20G00690.1|organism=Nannochloropsis oceanica|type=mRNA|length=5391bp|location=Sequence derived from alignment at chr20:232088..237478- (Nannochloropsis oceanica)
AACAAGCACAGGGAGGACTAAACGGTAACGAAGCAGCAGCAGCAGTAGTA
GCAGCAACATCAGTCTCGGTTGAACCGCCTGGTATGCCCACCAGCGGCCG
CCGCGAGCCTCACTCCAACCCATTACCACCATTGCCACTGCTGCTTCTAG
CTGCCTTCTTTCTGTGTAGCACTGCCTTTCACGCGCCATCGACCCTTCGT
TTCTCACATCCGTCTTGTTCATCGCTCGCTGCTACTTCCGCTGCCACCAC
CGTCGCAGCGTCTCCCAGTAGCAGCATCATTCCCACCCCCACCTGCACTA
CCACCACTACCACCACCAGCAGCAGCAGAAGCAGCAGCAGCAGTCGCAGC
AGCAAACGGAAGAAGCACCCGTCCGCCCGTCAAAACCGGGAGCCAAAAGG
GGACCAAGGCCGCGTGGAGCGACAGGCTAATCACATGGACCAGCTGCACA
TCCGGAACGTGGCAGACGAGGCGGAGATCGAACTGACCTTCTTCGATGTG
GATGGAAAGGTACGAGGCAGCAGAAAAAGGGGTGCCGAAAAGTCCCCAGC
TTCAAGATCAACGAGGAACATTCATGGCATTAACGCTTACCACCGGTATT
CTACTCACCATGTTCCCTCTCTCCCTTCCTCCCTCTCTCCCTCTCTTGCA
TTCCTATTTTTTCACAACAACAGCTGTGTCAACTTCGTCGTGCACGGACT
GAGACAGCAGGAGCGACATTACGGCGATTTGGGGCCAAGGTGGTGGGGAG
TGGTGGCGGCGGTGGAGGAAAAGGAGGGAAGGGTGGCAAGAAGCAAGGAA
AGAAGAATGTAATTGGGATGCAAGCGCAGGTAGGGAAAGAGGGAGAGAAG
GAGGAAGGGAAGGAGGGATGGAGGGGAAAATGACAATTTAGAGGTGGGGA
GCTTGTATTATGCATCATGGCCATTTGAATTTCAACTCGTTGATTAGGGC
TTGGTGCCAGGTAATATTAAAGTTCACGATCTGTCCCGCCCTCCCTCCCT
CCTTCCCTCCCTCCCTTTCCTCCCTCCCTCGGTCCCCTGCAGCTGCACAT
GAAGCTGTTGGATGGAACGAGTGAGCTGAACGTGGAGGAGATGAGTGTAG
CCGATGCATGGGCCGATGGGCGAGAGCTTTGGGTCCTGCGGGGCGCACAG
GGCGTGGCTGAGTGGGAGGGAAGGGAGGAGGGAGGGAAGGAGGAAGGGGA
GGGAGGACGGCGGTACGTGCTGAGGTATCGAGTGAGGGTAAATCCACCTC
ACATCACCGAGCTGCGATTTTCGAGCAAGTAAGGAGGGTAGGAGGGGAGG
AAGGGAGGGAGGGAGGGAGGGATGTCACATGTTCAGTCGATTCACTCCCC
CTCCCTCCCTCCCTCACTTGTTATTCACCAGATTAATCATGGCTGGCTTC
CCAGTGAACGTCCTGGCCCGTACACTCTTCGCAGACGGCGTCAACTATCG
GTGGCAGGTGGAGAGGGAGGATAAGTAAGTAAGAGGGAGGGTGGGAGGGA
GGGAGGGGGGAGGGAGGGAGGGACAGCACAGTAAGGATAAGGAAGGAGGG
AGGGAGGGAGGGAGGGAGGGGGGAGGGAGGGAGGGAGCACAGGCCATACC
TGTCCTGTGGTACTCATTCCCCAACCACTTTCCCTTCCTCCCTCCCTCCC
TCCTTCCTTATCCTCCCTCCTTCTTACCTTTCCTCTTTGATTCTCTCTAG
ATGGACTCCATTCGACCCCACCGATGAGGCGGGCCCAGATACTCCTGTCG
TTTACCCCTCCCTCCCTCCCTCCCTTCCTTCCTCTTCCTCCTCCTCCCAC
CACCACCTCCACCACGTGGGCTGTCGGATGCGAGTGCTGTGTACGCCGTA
CCGACATCAGCCGCAGCAACAAGCGCAACGGGAGGAGGGGGCCAAAGGAG
GGGAGAAAAAAGGACAAGACGAAAGGGAGGACGAGGAAGCAGTCGTCTGG
TGCGTAAGCAAGCCACGTCATTGCGGGCCCATCACGATCCGTTTCGAGCC
ATCCCTCCCTTCTTTCCTTCCTTCTTCCCTCCACACTCGCCACTCCCTCC
TCATTTATTTCCCGCCTTTCGCGGCAAGACCGCTGCCTGCTCCATTCCTC
CCTCCCCCTCACCGATCCCTCCCTCCCTCCCTCCCTTCCCTCCTCCCTCC
TTCGGTTAGGGGGAGGACCATTACCTGCTACACCAGCAAGGCCGTCACTT
CTCCCTCCTCTCCCTCCCTCACCCCTTGGCTGACACGCCTCCGGGTGCCT
CTTCCACTGGTACGGATGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAAAGCATGAGGTCCTTGTTACTTGCAGAAGTTTGTGATTGGTTTGGGC
CGGATATAGCTTAGTTTATATTCACCTATACATCCGTCTTCTGAATATAT
CAACCCAGGAGCGCCTGGAGCGGACCAGGAGGGAGGAGAGGGTGTTAAGG
CTCGTGTCTTACAATATCCTGGCCGACAAGTTCGTCCTGGGAGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCAGGGGACG
CATACATGGCGCCGTCCCGCCAGCGGTCTCATCACAGTGGGTTATCTCCC
CTACTTCATGCATGATATCTTGACCTAGATGTTCAAGCGACTGAAGCCCC
ATGTCCATTCACTCCTCCCTTCCTCCCTTCCTCCCTCCCCCCCTCCCTCC
TCTTCTTCCCTAGCTACGCGACTTCTGCTTGGTCACAGAAGCACCTGTAT
CCCTATGTGCATCCCTCCCATCTTCACTCCGAATATCGGACGCTCCTCAC
CGTGAAAGAGCTCTTGTCGTATAATGCAGACATGACCTGCTTGCAAGAGG
TAGGCGTGTGTACTCCCTTCCTCTCTCCCTCCCTTCCTTCCTTCCTTCCT
CCCTCCCTCCTCGCTTTTCTTTCCCCTCTTTCTTAAGTACCATCCCATTC
AATTTGATCTCCCTCCCTCAGGTGGACGAGCGCGTCTTTCGAGACCTTCT
CTCTCCCATCCTCTCGGCTTCGGGCCTTCGCGGTTTTTTCCTTTCCAAGT
GCGGAGGGACAAGGGAAGGAGCCGCATTCTTCTATAGGACGGAACGGCTG
TCGTGCCTCGCTACCCACCGGGTTGTCATGCGCGAGGCTTTTCAAAAGGA
AGATTCGCCCTTCAAGGTATCCCCTCCCTCCTTCCCTCCCTCCCTCCCTC
TCTCTCCTACCTTCTTCCCTCCCTCCCTCCCTCCCACCCTCTCCCATATC
GATACACATTCGTGACCCCCCTCGCTCCCTCCCTCGCTCCCTCCCTCCCT
CCCTCAGGCCCTTCAAGCCCGCTACCCATCCCTCCGTACCATCCTCCAGG
AGAAACTCACAACCGTCGGACAGATTGTGTTGCTGCGCCTCAAGGTGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGCTCGACGGGAGGGAAGGAGGG
GGCTTCATGAATCCTATGCTTCCCCCCTCAAGTCGAATGGAGAATACGCG
GGGGGGATGCAGCGAGGAAGAGAGGACTCAGGCCGAGGGAGCAAAAGGCT
TCATTGAATCAAATTGGATTCAAAATTGAATTCGGATGGCTCGTTTCATC
GTTTCTTGACAGGCGGTAGACGGGGATGGACGAGACACACTCCTCCTGGT
GGGCAACACGCATTTATTCTATCACCCCAAGGCACAGCACATCCGCCTGA
TGCAGGTAGAGAGGGAGGGAAAGAGGAAGGGAGGGAAGGGAGAAGGAGAA
GGGAGGGTGGTGTTTTGTTTTTGATGGATGAATGGGTGACTTTCCCTCCC
TCCCTCCCTCCCTCCCTTCCTTCCTCTTTTAGATGGCCACCCTTCTGAGG
GAAATGGAAGCTCATCAAGCCCGGGCGGAGGAGGAGTACGGCATCTCCCC
GCGCCTGGTCGTGTGCGGAGATCTGAACAGGTAGGGAGGGAGGGAGGGAG
GGAAGGAAAAAAGGAAGGAGAGATGGGGGGATACGAAGGCTGGAGGTCGG
AAGAGCATTGCTGTCGCTCACCCTCCCTCCCTCCCGCCCTCCCGCCCTCC
CTCAGCACCCCGCACACAGCCACCATTCGGTACCTGACTGGGGAAACTAT
TTCCCCTGGTGACGAGGTCTGGAAGTGGATTAATGCCTTCGGGTGGGGGA
AGCGGCAGGGGGAGGCGGGAGAAGAGCCGGTGGGGACAGCAGCAGGAGTA
ACGGCTGTCGGAGCAGCTGCAGGAGGGAAGGAGGTGGAGGAGGAGGAGGA
GGAAGAGGTAGAAGAAAGGGACCTGGACGCAGATGTAGCCGAGAAGGTAA
ACACATTTCTTCATTCCCTCCCTCTCTCCCCTCCCCTCCCTCCCTCCCTC
CCTCCCTCACTCCTCTGCGGGTCTTATCTACGCTTGGGGTCGTTTGAAAT
TCCGCAGCAACCCTCAGTTATTTCATTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCTCTTCCTGAGTGATTGCTTAATTTTGACCATG
TCTTACGCATATCCCCCCCGCGCATACGGACGGTACGCCACACCAAGCAG
ATTAATGCAGGTCAAAGTAGCGCCAGGATGGTGCCAAAAGAAGGCGGGAA
GCAGGGGGCAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGGAGGCGTGTTTGTGCCCGATGCCACT
GTCATTCCCTCCTTGTCCCTTGCGCGGCCTTTCATCTCTGCGTGTGGTTT
CCCTGACTTTACCAATTACGTGCAGGTATTGCGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGCGGATGTGGTGGTGTTGTTGATGTTCAAAGGGA
TCTAATGATCTGAATAATCATACATAAATATATATATATATATATATAAA
ATTGATAGAAGCTTTATATATACATTCTATGTCATTTTGTGTATGCAAAA
GAGGGAAACGATGCAGGAAGTTCGAGCGGTCTCGAGGAAGATGTTTGTCC
ATGATCCTAACTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTACCTAC
CTCCCTCATGCCAGGGCTTCGTCGAGACCCTGGACTACATCTTCCTTCAA
TCATCCACCGCCACTACACCTACTGCTGCTGCTGCTGCTACAGCTACAGT
TCCTGCTACTCCTGTTGCTCCTGCAGATTTTTCCGTCCTTTCCGTGGCGG
CTATGCCAACGCGGGAGGAAGCAGGGGCTGACACCGCCCTGCCCTCCTGG
CAAACCCCCTCGGACCACGTCAGCATTATGTGCGACGTGCAATTAAAGTA
GAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGGGAAGCTTACGTAGGTAGA
TGGGATATGTGGGCGGCCAAAGCCCCCAAAAATGAAAGCGA

Coding sequence (CDS) from alignment at chr20:232088..237478-

>NO20G00690.1 ID=NO20G00690.1|Name=NO20G00690.1|organism=Nannochloropsis oceanica|type=CDS|length=2643bp|location=Sequence derived from alignment at chr20:232088..237478- (Nannochloropsis oceanica)
ATGCCCACCAGCGGCCGCCGCGAGCCTCACTCCAACCCATTACCACCATT
GCCACTGCTGCTTCTAGCTGCCTTCTTTCTGTGTAGCACTGCCTTTCACG
CGCCATCGACCCTTCGTTTCTCACATCCGTCTTGTTCATCGCTCGCTGCT
ACTTCCGCTGCCACCACCGTCGCAGCGTCTCCCAGTAGCAGCATCATTCC
CACCCCCACCTGCACTACCACCACTACCACCACCAGCAGCAGCAGAAGCA
GCAGCAGCAGTCGCAGCAGCAAACGGAAGAAGCACCCGTCCGCCCGTCAA
AACCGGGAGCCAAAAGGGGACCAAGGCCGCGTGGAGCGACAGGCTAATCA
CATGGACCAGCTGCACATCCGGAACGTGGCAGACGAGGCGGAGATCGAAC
TGACCTTCTTCGATGTGGATGGAAAGCTGTGTCAACTTCGTCGTGCACGG
ACTGAGACAGCAGGAGCGACATTACGGCGATTTGGGGCCAAGGTGGTGGG
GAGTGGTGGCGGCGGTGGAGGAAAAGGAGGGAAGGGTGGCAAGAAGCAAG
GAAAGAAGAATGTAATTGGGATGCAAGCGCAGCTGCACATGAAGCTGTTG
GATGGAACGAGTGAGCTGAACGTGGAGGAGATGAGTGTAGCCGATGCATG
GGCCGATGGGCGAGAGCTTTGGGTCCTGCGGGGCGCACAGGGCGTGGCTG
AGTGGGAGGGAAGGGAGGAGGGAGGGAAGGAGGAAGGGGAGGGAGGACGG
CGGTACGTGCTGAGGTATCGAGTGAGGGTAAATCCACCTCACATCACCGA
GCTGCGATTTTCGAGCAAATTAATCATGGCTGGCTTCCCAGTGAACGTCC
TGGCCCGTACACTCTTCGCAGACGGCGTCAACTATCGGTGGCAGGTGGAG
AGGGAGGATAAATGGACTCCATTCGACCCCACCGATGAGGCGGGCCCAGA
TACTCCTGTCGTTTACCCCTCCCTCCCTCCCTCCCTTCCTTCCTCTTCCT
CCTCCTCCCACCACCACCTCCACCACGTGGGCTGTCGGATGCGAGTGCTG
TGTACGCCGTACCGACATCAGCCGCAGCAACAAGCGCAACGGGAGGAGGG
GGCCAAAGGAGGGGAGAAAAAAGGACAAGACGAAAGGGAGGACGAGGAAG
CAGTCGTCTGGGGGAGGACCATTACCTGCTACACCAGCAAGGCCGTCACT
TCTCCCTCCTCTCCCTCCCTCACCCCTTGGCTGACACGCCTCCGGGTGCC
TCTTCCACTGGAGCGCCTGGAGCGGACCAGGAGGGAGGAGAGGGTGTTAA
GGCTCGTGTCTTACAATATCCTGGCCGACAACTACGCGACTTCTGCTTGG
TCACAGAAGCACCTGTATCCCTATGTGCATCCCTCCCATCTTCACTCCGA
ATATCGGACGCTCCTCACCGTGAAAGAGCTCTTGTCGTATAATGCAGACA
TGACCTGCTTGCAAGAGGTGGACGAGCGCGTCTTTCGAGACCTTCTCTCT
CCCATCCTCTCGGCTTCGGGCCTTCGCGGTTTTTTCCTTTCCAAGTGCGG
AGGGACAAGGGAAGGAGCCGCATTCTTCTATAGGACGGAACGGCTGTCGT
GCCTCGCTACCCACCGGGTTGTCATGCGCGAGGCTTTTCAAAAGGAAGAT
TCGCCCTTCAAGGCCCTTCAAGCCCGCTACCCATCCCTCCGTACCATCCT
CCAGGAGAAACTCACAACCGTCGGACAGATTGTGTTGCTGCGCCTCAAGG
CGGTAGACGGGGATGGACGAGACACACTCCTCCTGGTGGGCAACACGCAT
TTATTCTATCACCCCAAGGCACAGCACATCCGCCTGATGCAGATGGCCAC
CCTTCTGAGGGAAATGGAAGCTCATCAAGCCCGGGCGGAGGAGGAGTACG
GCATCTCCCCGCGCCTGGTCGTGTGCGGAGATCTGAACAGCACCCCGCAC
ACAGCCACCATTCGGTACCTGACTGGGGAAACTATTTCCCCTGGTGACGA
GGTCTGGAAGTGGATTAATGCCTTCGGGTGGGGGAAGCGGCAGGGGGAGG
CGGGAGAAGAGCCGGTGGGGACAGCAGCAGGAGTAACGGCTGTCGGAGCA
GCTGCAGGAGGGAAGGAGGTGGAGGAGGAGGAGGAGGAAGAGGTAGAAGA
AAGGGACCTGGACGCAGATGTAGCCGAGAAGATTAATGCAGGTCAAAGTA
GCGCCAGGATGGTGCCAAAAGAAGGCGGGAAGCAGGGGGCAGGGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGGAGGCGTGTTTGTGCCCGATGCCACTGTCATTCCCTCCTTGTCCC
TTGCGCGGCCTTTCATCTCTGCGTGTGGTTTCCCTGACTTTACCAATTAC
GTGCAGGGCTTCGTCGAGACCCTGGACTACATCTTCCTTCAATCATCCAC
CGCCACTACACCTACTGCTGCTGCTGCTGCTACAGCTACAGTTCCTGCTA
CTCCTGTTGCTCCTGCAGATTTTTCCGTCCTTTCCGTGGCGGCTATGCCA
ACGCGGGAGGAAGCAGGGGCTGACACCGCCCTGCCCTCCTGGCAAACCCC
CTCGGACCACGTCAGCATTATGTGCGACGTGCAATTAAAGTAG

Synonyms

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