Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr2 genome chr2:1638877..1643363 +
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G06130.1 vs.
Match: ORY67939.1 (concanavalin A-like lectin/glucanase domain-containing protein [Leucosporidium creatinivorum])
HSP 1 Score: 98.6 bits (244), Expect = 1.000e-16
Identity = 73/208 (35.10%), Postives = 93/208 (44.71%), Query Frame = 0
Query: 555 YFEVTIEGAMLPDFPETERMDHERTYSSCISIGVGTKNFPLKGKQPGWTSNSWGYHGDDGHIFHGSGQGRPYGPTFGEGDTVGCGMAYFSEDERLQLKTQFRALARAGREGWREAWPEGEEAKEKTEETSEAENRNCRDPGGRIFFTKNGRFLGWTFDFVPLSVRALYPLVGLDS-YHAIRVNFGGGGGRSNAPMPFVFDLWGFQQEQ 762
Y+EVTI ++ S I IG + L + PGW NSWGYHGDDG F G G +GPTF GD VGCG+ Y A PE +E KE++ ET+ + GGR+FFTKNG LG+ F V LYP VGL + +R NFG PF FD+ G +++
Sbjct: 165 YYEVTIT---------------DKGLSGYIGIGFSHREVSLS-RLPGWEDNSWGYHGDDGRAFCCLGTGESFGPTFTTGDVVGCGVDYTG------------------------AGPE-KEGKERSRETAAKKGEG---EGGRVFFTKNGDMLGYAFSNVH---GKLYPSVGLRTPGEVVRANFGS--------EPFKFDIEGLVRDR 317
The following BLAST results are available for this feature:
BLAST of NO02G06130.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 Expect = 1.00e-16 / Id = 35.10 Sequence ORY67939.1
Match Name E-value Identity Description
ORY67939.1 1.000e-16 35.10 concanavalin A-like lectin/glucanase domain-contai... [more]
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Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO02G06130.1 ID=NO02G06130.1|Name=NO02G06130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2705bp back to top protein sequence of NO02G06130.1
>NO02G06130.1-protein ID=NO02G06130.1-protein|Name=NO02G06130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=880bp back to top mRNA from alignment at chr2:1638877..1643363+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G06130.1 ID=NO02G06130.1|Name=NO02G06130.1|organism=Nannochloropsis oceanica|type=mRNA|length=4487bp|location=Sequence derived from alignment at chr2:1638877..1643363+ (Nannochloropsis oceanica)ATGGGTGGTGATGAAGTCTTTTGCCAGCCAGCTCA
TTTTGGTGGGAGGGGGGTCATATTATTGTCTGCCAATGTCGCCGCCTCCT
CCGTCCATCCCACTTCTTCTCACAGCTCCAATTCACCATCACGGTGCCCC
ACCAAACACCCAGTAAGACACCTGTCACTTACATCTAAGTATCCCTTTAC
CCCCCTTCAGGGACGCACAGAGCGTCCACGCACAATGGCGACCCAAAAAA
TCGAGTCGGAGGCGCCGCTGGAGCAGCAGTTGCAGCGTGCGCAGGACGTG
CCCTCCTCGACCGAAGCGACAGCAACCTCCACGTTTGAATGCCAGCCAAA
ACTACTACTGGTCAGACCGCCAAGGCCTTTTCGCTTCTGCGAAGAATGCA
ATTTGAACAGATACTTTGAAGACTCAGATTACGAAAGGGAGGCTGAATTA
GCGCGCACCCGACCTTGGGGAACACGGCCGCCCTCTGAAACATCCTGGGC
TCGACTGTCGGAAGCGACTGACCTGCTCTCCACCATTTTCCGCTTTTTGC
AGCTGCGGGAGTTGATGGCCAT GTAAGTTCTGGTCCACGCTCTCCTCTTC
CCCTTTTCGAGTGTCTCATGCCTGGTTCTACCCCTCCTATCTCATGTCGA
CCTTCCAGCCTCGTACACCATCCCATCCCTCATTCCTTGCTTCCTCATTC
GCTCTCTCCCCTCACAGCTCTCGATGCGGTTCCCATGCTTGCTTGCAAGC
ATCTCGCAAAGATGGCATGTGGAAGGAGATAGCCTTGAGGATGTGGGCCA
CCCTGATGGATGCTACCCTAGGAGAGGGGACGCAGGACGAGGCGTCTAAA
TTG GTACGGACGGAGGGAGGAAGGGAGAGAGGGAGGTACGGAATAGAGGC
GAGGCCCTCGTGTGATACATTTACATCAAGTGAAAATAGCTTGCTCACAC
AGCAGCAAATGTTCCGAGCTATCTACCTTGTTCATTCCGTTTATCCTTCC
TTCTTTTCATCTTCTTTTGGTTTATAGGGCGTGTCCCACCACGAAGCCTC
CATCGGTAGCGCCCTATCCCCCTCCCTCCTGAGCTACAAGGACGTAGTGC
GCACCATGGCCTACTCCTGGCCCACCGAGTTCGACCCCATCTCGATAGAT
CTCAGCGGCTTGCACAAG GTCGGTACTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCGCCTTCCCTCCCCCCTCCCGACCTCTTTCCCTCGAT
CGCTCCACTCGTGCTTACCTTGTCTCCACACAGCTTATCGTCCTTCCCTC
TCCCTTCCTCCCTCCCTCCTCTTTCAGATCTCTGTCCTCCCCTCCTCTGC
CCCCTCCTCCTGGCTGTTTCCCCGTAAAATAACTCGTGTCGTTTATTCCG
GACCGAGGCTGGGCGGTGACCGTGCACTGCGCGCGGACAGACCCTTTCCC
CTGCGTGTGGCTCGGCCCCGAGTGGCGGACAGGGAGTGGCAGGGAGGGGA
GGGAAAGGAGGCGACGGCGGAGAGGGGGGGAAATGCAGGTCCGGGTGAGA
AGGAGGAAGCGAGGGAGGGAGAGGGGGAGGGAGTGGGGGAGGGCGAGGGG
GAGGAGAAGGGGAAAGGGAAGAAGAAAGCGAAGTTGGTGCACCCTTGTAG
CGCGGCGAAAGAGAGAGAAGAGAGAGATCAGGCAGGTGGAGAGAGGGCGG
TGCCAGGAAAAGGAGGAGGGGGAGGAGGAGACCCTGTTCGCTTCAAGGTT
GCAGTTGAGGACGAGAGGCAGGAGAAGGCCACTGAAGCACGAGGGGGAAA
GGGAAGCAGAACAAAAGTGCAGGAAAAGGAGGGAGGGGGGAGGGGGGGAG
GGAAAGTATCGGCGTCTCCCCAACCATCTTACCCGTCCAGTGAGGCTGTC
GTGCGCGTAGCTCCCTTCACGGTCTTTGCTGCCATCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCC
ATCAACCTTCCCCCTCTGCTGCCGCCATAAATGAAACCTCCCCAAACGTC
TCTGCTGGCTCCTCCACTGCTCCACCGCCTACGGGCCCTTCCTCCTCCTC
GCCCTCCTCCACGTCCTCCTCCCCTACCTACGCCTTCCTCCCCTCCACCA
TGGCCTACTTCGAGGTTACCATCGAGG GTCAGTGCCCTCCCTCCCTCCCT
CCCTCCCTCCTTGCCTCCCTTCATCCCTCCATCCCTCCTTCCATCCCTCC
CTCCATCCCTCCCTCCTGCCTCCCCTCCTCCCTTCCTCCCTACCCCCGCC
TCCCTCCCTCGCTCCCTTCATTTTCTTTAACCTGATTTTTCTCTCTCCCT
TCTTCCAGGCCGGGGCCTGCACTGACACCTACATGTCAAATCATCCTCCC
CCCTCCCTCCCTCCCCTTTCCTCCCTCCCACCCAGGGGCCATGCTTCCCG
ACTTCCCAGAGACCGAGCGCATGGACCACGAGAGGACGTATAGCAGCTGC
ATCTCCATTGGGGTGGGCACCAAGAACTTTCCCTTGAAGG GTAAGGAGGG
ACGGAGGGAGGGACAGAATAGGAGAGGGAAAGAGGGAAGGGTCGATGGAC
GCGGCATGTCAAGGAAGGCTCCGACTCCTCCCCTCCCTCCCCCCTGTCCT
CCCTCCCTCCCTCCCTTCCCAGGCAAGCAACCGGGTTGGACCTCAAACTC
GTGGGGCTACCACGGCGACGACGGTCACATTTTCCACGGGAGTGGGCAGG
GACGGCCGTATGGGCCCACCTTCG GTAGGACGGACCGGGGCCGGGGGGGA
GGGAGGGAGGGGATCTACGCTCTAGTCCGGTGAGTGGTTCCCATCCTTCC
TCACCATTCGCTCCTCTTTCCCTCCTCCCCTCTCACCCTCCGCCCTCGTC
AGGGGAAGGCGATACAGTCGGCTGTGGCATGGCCTACTTCTCCGAGGACG
AAAGACTGCAACTGAAAACGCAGTTCCGGGCCTTGGCGCGGGCAGGGAGG
GAGGGATGGAGGGAGGCGTGGCCGGAGGGGGAGGAAGCAAAGGAAAAGAC
AGAGGAGACATCGGAGGCAGAAAACCGAAATTGCC GTGAGTTGTGGGATA
GGAGTTGTGAGGTGTGGGATACGATGGATGAGTGAAGAGCAAGAGCAGAT
GCCAGGTCCGAAAAAACGTGTGCCCTTCCTCTCTCCCGCCTTCCCTCCCG
CCTTCCCTCCCGCCCTGCATCGGCTCCTTCCTCCTTGGCCTTTGAATGAT
CCGAGTGACCATGACGTACAACTCTCCTTCCCCCCCATCCTCCCCCCCTC
CCTCAGGCGACCCCGGGGGCCGCATTTTCTTCACCAAGAACGGCCGTTTT
CTCGGATGGACGTTCGATTTTGTCCCTCTCTCTGTCCGAGCCCTCTACCC
CCTCGTGGGCCTGGACAGCTACCACGCCATCCGCGTCAACTTCGGGGGAG
GTACCTCCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTTAAC
TGTACCTCACCACTTCCAATCCCCTCTCCATCTTTCCCTCCCTCCCTCCC
TCTTTCCTAGGTGGTGGCCGCAGTAATGCCCCCATGCCGTTCGTCTTCGA
TTTGTGGGGATTCCAGCAAGAGCAGCTGGGCGGAAGGAAGACG GTGAGTG
GGAGGGAGGGAAGAAAGGAGGGGGCGAGGGAAGGAGGGAGGGAGGGGACG
ATGGGTGGGTGGTTGTTGGAGGATTTCCCCCTTTTCTTATCTGCGCACGT
TCACCAATCCTCCCTCCCTCCCTCCCTCCCCTCCTCCCTTCCTCAGGCGG
ACGGCGCCTTGGCAGCAGGAGTGCGTTTCGGCTATTACAAGACCCACCTT
TTGCACGTACACATGGACGACGACATCAGTGGCAGGGCATTGCGGGCGGA
GGAGGGCCGCCGAGTG GTAAGAAGGATGCGTGGGAGGGAGGGAGGGAGGG
AAGCGCAAAGGGAGTGGAGGGCGGTAGGAGACAGAATGTCTTCCTTGACG
AAAATTGGCTCCTCCCTCTTTGACTCCCTTTCTCCCTTCCTCTTCCCGCC
CTCCCCCTCCCTTCCTCCCTCCCTGCCCCCAGAACCACCTGAGGCGGCTG
GGCTTGGAGACGTCTTACTCCGACAGCGACTTCGATGAGGGTGACTACGA
TGATGATGACGACTACGATGATGATGATGGTGACGACGTT GTAAGTCTCC
TTTCTCCCTCCCTCCCTCCTCCCATTGCCTCTCCATCTCACGGCTCTCTT
CCTCCGATCCCCTCTTTTTTCGCCAGGAGGATGAGGATGACGACGAGGGT
GAAGATGAGGGTGAGGATTTCGTAGAGTATGAGTACGGAGACGAGGAGGG
TTTCGTAGAGTATGAGTACGGAGACGATGCGGATTAG back to top Coding sequence (CDS) from alignment at chr2:1638877..1643363+
>NO02G06130.1 ID=NO02G06130.1|Name=NO02G06130.1|organism=Nannochloropsis oceanica|type=CDS|length=2640bp|location=Sequence derived from alignment at chr2:1638877..1643363+ (Nannochloropsis oceanica) back to top