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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr18 | genome | chr18:698241..700129 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO18G02180.1 ID=NO18G02180.1|Name=NO18G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=1889bp GGGGGGGTTGGTCAATGTCGAAGTAATTTCCTCATTTCCTCTGCCGTGGT AACTTCAAGGAGCATCGGTCCGTTTTCGCCCCCAAAAGCTCGGTTTCTCA TTTTTCGATCAGGTTTAATTGGTTTCACCCTCATTTGTATGCCTCTCTCT CCTGGCTTGTGTTTATTTTTAAGATACATGTATTTTGCTGGTGCCCTGAT ATTTTGAACACATCTTTTCCATTCTCATACACACAAATTAAGGCCTCCTT CCTCCCAAGATGCTTCCCTCCTCCTCCTCCTCCTCGTTGTCGCCGTCGTC ACTGGTTCGCGTGAGGAAGCGTCTACTCATCCGCGCCGCAGTCCATGCAC CGCATTCGACTTTACGTGCCCTCTTCACTCCTTTCTGCCAGCCTCCTGAG GTTACAAGAAGGAGGGAAGGGGATGACTCGGCCGCCACCTGCCATCTCAC CAAGGCCGACATACTTGCTGCAATGGGCCAGCCACAGAGAGATAGAGGAG GGACAGCAGCGGCGTGGCTCGACGCCCTCTTCGCTAACATCGTGGAAGAA GATGGGAGGGAAGAAAAGGCCCTCGACTTGGAGTCATTCCTGGCCTTCCT GGAGCGCGGGTCCTGTCTTCACTCTCCTTCACCGCAACCACCCATCTCCT CCTCATCCCCATCCTCACTCTACCCCCTCCCCGTCCTCACCCCACCCTTG GGGCGCAAGCCCCTCTCAAGAGCATTATCCACTTCCATTGCTTCTACTCT CACGCTCATCCCTTCTTCCTGCTCCTCCACCCTGTCCACCACCTTGTCCT CCCTCCCTCCTTACCCCCGCTGGCAAAAACGGGAATTCACGCACCACATC CACGTAGTAGAATACATGACCATCGATAAAGACGGGAGGATGGAGTCTTT GTTAGAAAAAGAGGTGACGGGGAAGGAAGTGCTGCACGTAGAGTGGGAAG GGGAAAGCAACAGGGGAAAGGAGGAGGGAAGGAAAGGAGGAGGAGGAGAA GAAGGAGGATGGGGACGCGGGGGTACTGCGCATCGGGAGAGGATTGAATA CTCGTTCAGGGAAATAATGGATGGAGGAGTGGTGGTGGAGGAAGAATGTG GAAGGGAGGAGTATGTGCACCTAGCCAGAAGAAGGGAAAGCGGGACACAT GAAGTGGGCTTAGAAGGCGAGGAGGAGGGGGAGGAGGAGGAAGAGGAGTG GGAGCGGATGGAAAGCTCGTTGCCGGCGAGGTATTTTAATACGGAGGAAG GGAAAGGGGGAAGAGGAGAGGACGAGTGGAAGAGGAGAAGAAGGGGAGAT GAAGGAGGAGGAGGAGAAGAGCGGCCTGAGGAGCAGCAGGAGGGCGGGAG GGAGGGAGGGGAGGAAGGCGGGTTGCGGCAAGGAGAGAGTGTAAGACGGC CATCACCTCCACCGGGGGTAGAATCATATCGACCGCAGACGATAGTGACA GAAGGGGGATTCAGGATGAAATTGGTGCATAAACAGGGGCATCAGTGGTG GAAGACAGAACGGGAGGAGGAAGAGGGGGAGAGAGAGGGGGAGGAAGGGG CGTCGTGTGGGGGGCAGTTGGGGAGGGAGATAAGGAAGCAGTCGAAGGGG AAGAGTTGAGAGACATGCCGTGCGCTTACAAAGAGAGAAAGGTATAAATA ATCGAAATAAAGCAAAAAAGTGTGCGTATGGTGCGTGTAACCCGCGCGAC GGCGCCTTTTAGGACAGTGAAGCATCAGAAGAGGGATGAGAGGAGGGACG GCGAAAGAGAAGGAACCACCAATTCAAAGCGGGTTCGATTTATTTATATT GTCACGGGGGCGGGTAGCGAGCAAAGGCTGCGAAGCCGACACTTACAAAT GCATAAGCAAATGAAATGAAAAAAAGAATGAAAGACGAG back to topprotein sequence of NO18G02180.1 >NO18G02180.1-protein ID=NO18G02180.1-protein|Name=NO18G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp MLPSSSSSSLSPSSLVRVRKRLLIRAAVHAPHSTLRALFTPFCQPPEVTR RREGDDSAATCHLTKADILAAMGQPQRDRGGTAAAWLDALFANIVEEDGR EEKALDLESFLAFLERGSCLHSPSPQPPISSSSPSSLYPLPVLTPPLGRK PLSRALSTSIASTLTLIPSSCSSTLSTTLSSLPPYPRWQKREFTHHIHVV EYMTIDKDGRMESLLEKEVTGKEVLHVEWEGESNRGKEEGRKGGGGEEGG WGRGGTAHRERIEYSFREIMDGGVVVEEECGREEYVHLARRRESGTHEVG LEGEEEGEEEEEEWERMESSLPARYFNTEEGKGGRGEDEWKRRRRGDEGG GGEERPEEQQEGGREGGEEGGLRQGESVRRPSPPPGVESYRPQTIVTEGG FRMKLVHKQGHQWWKTEREEEEGEREGEEGASCGGQLGREIRKQSKGKS* back to topmRNA from alignment at chr18:698241..700129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO18G02180.1 ID=NO18G02180.1|Name=NO18G02180.1|organism=Nannochloropsis oceanica|type=mRNA|length=1889bp|location=Sequence derived from alignment at chr18:698241..700129+ (Nannochloropsis oceanica) GGGGGGGTTGGTCAATGTCGAAGTAATTTCCTCATTTCCTCTGCCGTGGT
AACTTCAAGGAGCATCGGTCCGTTTTCGCCCCCAAAAGCTCGGTTTCTCA
TTTTTCGATCAGGTTTAATTGGTTTCACCCTCATTTGTATGCCTCTCTCT
CCTGGCTTGTGTTTATTTTTAAGATACATGTATTTTGCTGGTGCCCTGAT
ATTTTGAACACATCTTTTCCATTCTCATACACACAAATTAAGGCCTCCTT
CCTCCCAAGATGCTTCCCTCCTCCTCCTCCTCCTCGTTGTCGCCGTCGTC
ACTGGTTCGCGTGAGGAAGCGTCTACTCATCCGCGCCGCAGTCCATGCAC
CGCATTCGACTTTACGTGCCCTCTTCACTCCTTTCTGCCAGCCTCCTGAG
GTTACAAGAAGGAGGGAAGGGGATGACTCGGCCGCCACCTGCCATCTCAC
CAAGGCCGACATACTTGCTGCAATGGGCCAGCCACAGAGAGATAGAGGAG
GGACAGCAGCGGCGTGGCTCGACGCCCTCTTCGCTAACATCGTGGAAGAA
GATGGGAGGGAAGAAAAGGCCCTCGACTTGGAGTCATTCCTGGCCTTCCT
GGAGCGCGGGTCCTGTCTTCACTCTCCTTCACCGCAACCACCCATCTCCT
CCTCATCCCCATCCTCACTCTACCCCCTCCCCGTCCTCACCCCACCCTTG
GGGCGCAAGCCCCTCTCAAGAGCATTATCCACTTCCATTGCTTCTACTCT
CACGCTCATCCCTTCTTCCTGCTCCTCCACCCTGTCCACCACCTTGTCCT
CCCTCCCTCCTTACCCCCGCTGGCAAAAACGGGAATTCACGCACCACATC
CACGTAGTAGAATACATGACCATCGATAAAGACGGGAGGATGGAGTCTTT
GTTAGAAAAAGAGGTGACGGGGAAGGAAGTGCTGCACGTAGAGTGGGAAG
GGGAAAGCAACAGGGGAAAGGAGGAGGGAAGGAAAGGAGGAGGAGGAGAA
GAAGGAGGATGGGGACGCGGGGGTACTGCGCATCGGGAGAGGATTGAATA
CTCGTTCAGGGAAATAATGGATGGAGGAGTGGTGGTGGAGGAAGAATGTG
GAAGGGAGGAGTATGTGCACCTAGCCAGAAGAAGGGAAAGCGGGACACAT
GAAGTGGGCTTAGAAGGCGAGGAGGAGGGGGAGGAGGAGGAAGAGGAGTG
GGAGCGGATGGAAAGCTCGTTGCCGGCGAGGTATTTTAATACGGAGGAAG
GGAAAGGGGGAAGAGGAGAGGACGAGTGGAAGAGGAGAAGAAGGGGAGAT
GAAGGAGGAGGAGGAGAAGAGCGGCCTGAGGAGCAGCAGGAGGGCGGGAG
GGAGGGAGGGGAGGAAGGCGGGTTGCGGCAAGGAGAGAGTGTAAGACGGC
CATCACCTCCACCGGGGGTAGAATCATATCGACCGCAGACGATAGTGACA
GAAGGGGGATTCAGGATGAAATTGGTGCATAAACAGGGGCATCAGTGGTG
GAAGACAGAACGGGAGGAGGAAGAGGGGGAGAGAGAGGGGGAGGAAGGGG
CGTCGTGTGGGGGGCAGTTGGGGAGGGAGATAAGGAAGCAGTCGAAGGGG
AAGAGTTGAGAGACATGCCGTGCGCTTACAAAGAGAGAAAGGTATAAATA
ATCGAAATAAAGCAAAAAAGTGTGCGTATGGTGCGTGTAACCCGCGCGAC
GGCGCCTTTTAGGACAGTGAAGCATCAGAAGAGGGATGAGAGGAGGGACG
GCGAAAGAGAAGGAACCACCAATTCAAAGCGGGTTCGATTTATTTATATT
GTCACGGGGGCGGGTAGCGAGCAAAGGCTGCGAAGCCGACACTTACAAAT
GCATAAGCAAATGAAATGAAAAAAAGAATGAAAGACGAG back to topCoding sequence (CDS) from alignment at chr18:698241..700129+ >NO18G02180.1 ID=NO18G02180.1|Name=NO18G02180.1|organism=Nannochloropsis oceanica|type=CDS|length=1350bp|location=Sequence derived from alignment at chr18:698241..700129+ (Nannochloropsis oceanica) ATGCTTCCCTCCTCCTCCTCCTCCTCGTTGTCGCCGTCGTCACTGGTTCG CGTGAGGAAGCGTCTACTCATCCGCGCCGCAGTCCATGCACCGCATTCGA CTTTACGTGCCCTCTTCACTCCTTTCTGCCAGCCTCCTGAGGTTACAAGA AGGAGGGAAGGGGATGACTCGGCCGCCACCTGCCATCTCACCAAGGCCGA CATACTTGCTGCAATGGGCCAGCCACAGAGAGATAGAGGAGGGACAGCAG CGGCGTGGCTCGACGCCCTCTTCGCTAACATCGTGGAAGAAGATGGGAGG GAAGAAAAGGCCCTCGACTTGGAGTCATTCCTGGCCTTCCTGGAGCGCGG GTCCTGTCTTCACTCTCCTTCACCGCAACCACCCATCTCCTCCTCATCCC CATCCTCACTCTACCCCCTCCCCGTCCTCACCCCACCCTTGGGGCGCAAG CCCCTCTCAAGAGCATTATCCACTTCCATTGCTTCTACTCTCACGCTCAT CCCTTCTTCCTGCTCCTCCACCCTGTCCACCACCTTGTCCTCCCTCCCTC CTTACCCCCGCTGGCAAAAACGGGAATTCACGCACCACATCCACGTAGTA GAATACATGACCATCGATAAAGACGGGAGGATGGAGTCTTTGTTAGAAAA AGAGGTGACGGGGAAGGAAGTGCTGCACGTAGAGTGGGAAGGGGAAAGCA ACAGGGGAAAGGAGGAGGGAAGGAAAGGAGGAGGAGGAGAAGAAGGAGGA TGGGGACGCGGGGGTACTGCGCATCGGGAGAGGATTGAATACTCGTTCAG GGAAATAATGGATGGAGGAGTGGTGGTGGAGGAAGAATGTGGAAGGGAGG AGTATGTGCACCTAGCCAGAAGAAGGGAAAGCGGGACACATGAAGTGGGC TTAGAAGGCGAGGAGGAGGGGGAGGAGGAGGAAGAGGAGTGGGAGCGGAT GGAAAGCTCGTTGCCGGCGAGGTATTTTAATACGGAGGAAGGGAAAGGGG GAAGAGGAGAGGACGAGTGGAAGAGGAGAAGAAGGGGAGATGAAGGAGGA GGAGGAGAAGAGCGGCCTGAGGAGCAGCAGGAGGGCGGGAGGGAGGGAGG GGAGGAAGGCGGGTTGCGGCAAGGAGAGAGTGTAAGACGGCCATCACCTC CACCGGGGGTAGAATCATATCGACCGCAGACGATAGTGACAGAAGGGGGA TTCAGGATGAAATTGGTGCATAAACAGGGGCATCAGTGGTGGAAGACAGA ACGGGAGGAGGAAGAGGGGGAGAGAGAGGGGGAGGAAGGGGCGTCGTGTG GGGGGCAGTTGGGGAGGGAGATAAGGAAGCAGTCGAAGGGGAAGAGTTGA back to top
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