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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr16 | genome | chr16:959040..961861 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G03200.1 vs.
Match: EWM23777.1 (3mercaptopyruvate sulfurtransferase [Nannochloropsis gaditana]) HSP 1 Score: 502.3 bits (1292), Expect = 1.400e-138 Identity = 266/396 (67.17%), Postives = 302/396 (76.26%), Query Frame = 0
Query: 1 MLYRQDATVMTHLLLRRALPSTSRSSSRSGLL--TSPIASTVLKCLTMTSVMWYSAASASPSP--------------PPL----FQSPLVTVEQVRASLAASSGSGSGSGNARDRSIKFLDSSWHLDKTRDAKKEFLEEHLPGAQFFDIDAISDKSSPFPHMIPTATAFAEAASALGLENKDYIVVYTTQKCFSAARCWWTFRAFGHENVFVLQGGLPAWKAAGGKVEKGAAQVRSSRPPQGLVQQGGNAYLLGKEGFQAKMKPELVYSWQQVLTLVESAKDEKDR---IVDARGAPRFNAEVDEPRPGLARGHIPGSVNVPFDKVMVEGDWTRFKPKEEIFEAFRAGGLDLMALPKERKVITTCGSGVTAAALSFAMVLAGREVEAVPVFDASWA 374
M Y T M L L R +R L TSP+A+ +LKCLTMTSVMW+ +++ P PPL FQSPLVT EQV++SLA S+ SG G RSIKFLDSSWHLDK+RDAKKEFL EHLPGAQFFDIDAISD SSPFPHM+P+ATAF+EA SALGLENKD IVVYTTQKCFSAARCWWTFRAFGHE V++LQGGLPAW+AAGGK E G AQ R SRPP+GLV+QGGNA+LL K+GFQAK++ +LVYSWQQVL +VE + E + I DARG PRFNA+VDEPRPGLARGHIPGSVNVPFD+V EGDWTRF+ E+ E F A G+D+ +L KERKVITTCGSGVTAAALSFAMVLAG +V AVPVFDASWA
Sbjct: 1 MYYNGVGTGMKRLFLHRTNGLIARLPRSPTLTPPTSPLAAMLLKCLTMTSVMWFGVTASAARPNVNIGSSRNSGHQSPPLSPLMFQSPLVTAEQVKSSLAESNKSGDSKG----RSIKFLDSSWHLDKSRDAKKEFLGEHLPGAQFFDIDAISDTSSPFPHMLPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVEGEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTRFRRPAEVVEVFAAQGVDVRSLSKERKVITTCGSGVTAAALSFAMVLAGADVTAVPVFDASWA 392
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G03200.1 ID=NO16G03200.1|Name=NO16G03200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2109bp
ATGCTCTACCGACAGGACGCGACAGTGATGACGCATTTGCTCCTCCGTCG
GGCACTTCCTTCGACCTCAAGGTCGAGCAGCCGCAGCGGCCTGTTGACCT
CCCCTATTGCAAGCACCGTCCTCAAGTGCCTCACCATGACCAGCGTCATG
TGGTATAGCGCCGCTTCGGCAAGCCCTTCTCCGCCTCCTCTGTTTCAATC
GCCCTTGGTGACGGTCGAGCAGGTGCGTGCGTCCCTCGCTGCCAGCAGCG
GCAGCGGTAGCGGTAGCGGCAACGCTAGGGACCGGAGCATCAAGTTCCTC
GACTCTTCCTGGCATTTGGACAAGACACGCGATGCCAAGAAAGAGTTTCT
AGAGGAGCACTTGCCCGGCGCCCAGTTCTTCGACATCGACGCCATCAGCG
ATAAATCCTCTCCTTTCCCCCACATGATTCCCACGGCCACCGCCTTTGCC
GAAGCCGCCTCCGCCCTGGGTTTGGAGAACAAGGACTATATCGTCGTCTA
TACGACCCAGAAATGCTTCAGTGCCGCGCGGTGTTGGTGGACCTTTCGTG
CGTTTGGGCACGAGAACGTCTTCGTTCTTCAGGGGGGGTTGCCCGCGTGG
AAGGCAGCGGGAGGGAAGGTGGAGAAGGGAGCTGCACAAGTGCGTTCGAG
TCGGCCGCCACAAGGGTTGGTGCAGCAGGGAGGGAATGCGTATTTGTTGG
GGAAGGAGGGATTCCAGGCCAAGATGAAGCCGGAGCTAGTCTACTCGTGG
CAGCAGGTGCTCACATTGGTGGAGTCGGCGAAGGACGAGAAGGACCGTAT
CGTGGACGCCAGGGGAGCGCCGAGATTCAATGCAGAGGTGGATGAGCCAC
GCCCGGGATTGGCAAGGGGCCATATCCCCGGCTCTGTGAATGTGCCGTTC
GACAAGGTCATGGTGGAGGGAGACTGGACGCGGTTCAAACCCAAGGAGGA
GATCTTCGAGGCTTTCCGGGCTGGAGGCCTGGACCTGATGGCACTACCGA
AGGAGAGGAAGGTCATCACCACGTGCGGGTCGGGCGTGACGGCGGCGGCC
TTGTCGTTTGCCATGGTGTTGGCAGGGAGGGAGGTGGAGGCGGTGCCTGT
ATTCGACGCCTCCTGGGCGGGATGGGGTCAGTTGAAGGGAGTGCCCATCG
AGCCCCCACCGGTCGACCGCTCATGAGGGGAGGGAGGGAGGGAGGGAGGG
GGACAGGTTAGGGTGGTAGCAACGCGATTTTTTGTGTGGCTTTGGAAGAT
GGGAGGGGATGGAAGCATCCAAAGAGAGCAAGGAGAAGCTCGAGGCGAAG
GGAAGCTGGTTGGTGGGGTTGGTGTCGTACTACCTCTCCTTTCTTTGTTC
AGGGAGTCGATGCATCCTTTGCTTTCCTCTTGTTCCTCATCTCTGTTCTA
TCGCACACAAACAAACACACACACACACACACTTACTCAAACTTTTTCTC
TCTCCCTCTCCCCCTCTCTCTTTCTCTTTCGCTTTTTTTCTTGCTCCCTC
TCTCTCTCTCTGCTACTCTCACTTTTGCACACAATCGCCGCCTCCCTCCT
CCCTCCTTCCCTCCTTCCAGTTCTATCCCTCTTCTCTTCCTATCTCTTTC
TTGTTACTTGTTCCATTTTTATTTTATGCCCTCTACTGTCCAGCCTTATC
ACCACCTTGCATCTCTTCTTCCACTCTCTTCTCCATCATTTCCCCCTCCT
CCACCACCCCCTTCTCCTCGTTCTCTTGCTGCCCTCCTCCCTCTCCTCCC
CGTCCTCCATTTCCCAGATGAAGGAGGGCCAACGCGGCTGTTCTATGTTC
GTCCTTCCCTCCCTCCCTCTCCCTATCAAATTCCTTCTCTCTCTGTTCTC
CACTTCTCTGTGATGTCGTGGTGAGCTCCTCCCCCTCCCCTCGCTCCTTC
CCTTCCTTCCTCCTTCCTATAACCATCATTTCCGTCGAGGATGCTGAAGA
CAACGCAGGAGGATAATACACGAAAAAAACGTTTTCCATCTCGTCGTCGT
CCTTCTCCTCTCTCCCCTGCTCCTCCCCCTCCTCCCCCTCCTCCCTCTCT
TGCTCTCTCTCCATCTGCTTCGTCCTCAGCGCCTCCCCTTCCTCCTCCTC
CCCTTCCTC back to topprotein sequence of NO16G03200.1 >NO16G03200.1-protein ID=NO16G03200.1-protein|Name=NO16G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MLYRQDATVMTHLLLRRALPSTSRSSSRSGLLTSPIASTVLKCLTMTSVM
WYSAASASPSPPPLFQSPLVTVEQVRASLAASSGSGSGSGNARDRSIKFL
DSSWHLDKTRDAKKEFLEEHLPGAQFFDIDAISDKSSPFPHMIPTATAFA
EAASALGLENKDYIVVYTTQKCFSAARCWWTFRAFGHENVFVLQGGLPAW
KAAGGKVEKGAAQVRSSRPPQGLVQQGGNAYLLGKEGFQAKMKPELVYSW
QQVLTLVESAKDEKDRIVDARGAPRFNAEVDEPRPGLARGHIPGSVNVPF
DKVMVEGDWTRFKPKEEIFEAFRAGGLDLMALPKERKVITTCGSGVTAAA
LSFAMVLAGREVEAVPVFDASWAGWGQLKGVPIEPPPVDRS* back to topmRNA from alignment at chr16:959040..961861- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G03200.1 ID=NO16G03200.1|Name=NO16G03200.1|organism=Nannochloropsis oceanica|type=mRNA|length=2822bp|location=Sequence derived from alignment at chr16:959040..961861- (Nannochloropsis oceanica)
ATGCTCTACCGACAGGACGCGACAGTGATGACGCATTTGCTCCTCCGTCG
GGCACTTCCTTCGACCTCAAGGTCGAGCAGCCGCAGCGGCCTGTTGACCT
CCCCTATTGCAAGCACCGTCCTCAAGTGCCTCACCATGACCAGCGTCATG
TGGTATAGCGCCGCTTCGGCAAGCCCTTCTCCGCCTCCTCTGTTTCAATC
GCCCTTGGTGACGGTCGAGCAGGTGCGAAACGAGCAGGGGCGGGGAGTAG
AGCAGGGATATGAGGCAGAAGAGGGAAAGCATGCGCCTGCGAGAGCCACC
ACACGCCCTTTTTCAGGCATACACCAGCACATTTATACTTTTACCAACCT
TTCATTTAGTCGACTTTATGGTTTTCACTTCACGTTTCTTGATTTCTCTT
ACAGGTGCGTGCGTCCCTCGCTGCCAGCAGCGGCAGCGGTAGCGGTAGCG
GCAACGCTAGGGACCGGAGCATCAAGTTCCTCGACTCTTCCTGGCATTTG
GACAAGACACGCGATGCCAAGAAAGAGTTTCTAGGTACGGTTGTGTAGTA
TGCGGAGAGTATAGCTGGCGTTATCGTGTATGTCGCCGCCTGGACTCATT
ATTTCTCTACTTGTTTCTTTCCCCATTTCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCTGTTGCTTTCATCCCGCTTTCCCTGGACATGTCCA
AACGCTTTCCACAAATTATTTTGCCGTTGGTGTTTTTGTCCTACCTCATC
ACTCATCTTTCCCTTCATTCTCCCCCTCCTACTGCTCTCGAAGAGGAGCA
CTTGCCCGGCGCCCAGTTCTTCGACATCGACGCCATCAGCGATAAATCCT
CTCCTTTCCCCCACATGATTCCCACGGCCACCGCCTTTGCCGAAGCCGCC
TCCGCCCTGGGTTTGGAGAACAAGGACTATATCGTCGTCTATACGACCCA
GAAATGCTTCAGTGCCGCGCGGTGTTGGTGGACCTTTCGTGCGTTTGGGC
ACGAGAACGTCTTCGTTCTTCAGGGGGGGTTGCCCGCGTGGAAGGCAGCG
GGAGGGAAGGTGGAGAAGGGAGCTGCACAAGTGCGTTCGAGTCGGCCGCC
ACAAGGGTTGGTGCAGCAGGGAGGGAATGCGTATTTGTTGGGGAAGGAGG
GATTCCAGGCCAAGATGAAGCCGGAGCTAGTCTACTCGTGGCAGCAGGTG
CTCACATTGGTGGAGTCGGCGAAGGACGAGAAGGACCGTATCGTGGACGC
CAGGGGAGCGCCGAGATTCAATGCAGAGGTGGATGAGCCACGCCCGGGAT
TGGCAAGGGGCCATATCCCCGGCTCTGTGAATGTGCCGTTCGACAAGGTC
ATGGTGGAGGGAGACTGGACGCGGTTCAAACCCAAGGAGGAGATCTTCGA
GGCTTTCCGGGCTGGAGGCCTGGACCTGATGGCACTACCGAAGGAGAGGA
AGGTCATCACCACGTGCGGGTCGGGCGTGACGGCGGCGGCCTTGTCGTTT
GCCATGGTGTTGGCAGGGAGGGAGGTGGAGGCGGTGCCTGTATTCGACGC
CTCCTGGGCGGGATGTACGTAGGGGGTGGAAGGGAGGGGGGAGGAAGGGG
GGAAGGAAGGGGGGGAGAAAGAAAAGGATTTTAGAAGGAGCACTTAGAGG
GAGAAAGGGGAGGGGGGAGGAAAAGGGAGAGGGAAGAACGAGGGGTTTGT
GCGTGCCGACGTATTGATCTTGTGCGTCGTATGCAAGCTCGGCCCATGTC
CTTCTCCCTCCCTTCCTCTCCTTCTCCTCTACACGACGCACTTACCCACC
CACCCACATACACCATCACCTTAATCCATCACACAGGGGGTCAGTTGAAG
GGAGTGCCCATCGAGCCCCCACCGGTCGACCGCTCATGAGGGGAGGGAGG
GAGGGAGGGAGGGGGACAGGTTAGGGTGGTAGCAACGCGATTTTTTGTGT
GGCTTTGGAAGATGGGAGGGGATGGAAGCATCCAAAGAGAGCAAGGAGAA
GCTCGAGGCGAAGGGAAGCTGGTTGGTGGGGTTGGTGTCGTACTACCTCT
CCTTTCTTTGTTCAGGGAGTCGATGCATCCTTTGCTTTCCTCTTGTTCCT
CATCTCTGTTCTATCGCACACAAACAAACACACACACACACACACTTACT
CAAACTTTTTCTCTCTCCCTCTCCCCCTCTCTCTTTCTCTTTCGCTTTTT
TTCTTGCTCCCTCTCTCTCTCTCTGCTACTCTCACTTTTGCACACAATCG
CCGCCTCCCTCCTCCCTCCTTCCCTCCTTCCAGTTCTATCCCTCTTCTCT
TCCTATCTCTTTCTTGTTACTTGTTCCATTTTTATTTTATGCCCTCTACT
GTCCAGCCTTATCACCACCTTGCATCTCTTCTTCCACTCTCTTCTCCATC
ATTTCCCCCTCCTCCACCACCCCCTTCTCCTCGTTCTCTTGCTGCCCTCC
TCCCTCTCCTCCCCGTCCTCCATTTCCCAGATGAAGGAGGGCCAACGCGG
CTGTTCTATGTTCGTCCTTCCCTCCCTCCCTCTCCCTATCAAATTCCTTC
TCTCTCTGTTCTCCACTTCTCTGTGATGTCGTGGTGAGCTCCTCCCCCTC
CCCTCGCTCCTTCCCTTCCTTCCTCCTTCCTATAACCATCATTTCCGTCG
AGGATGCTGAAGACAACGCAGGAGGATAATACACGAAAAAAACGTTTTCC
ATCTCGTCGTCGTCCTTCTCCTCTCTCCCCTGCTCCTCCCCCTCCTCCCC
CTCCTCCCTCTCTTGCTCTCTCTCCATCTGCTTCGTCCTCAGCGCCTCCC
CTTCCTCCTCCTCCCCTTCCTC back to topCoding sequence (CDS) from alignment at chr16:959040..961861- >NO16G03200.1 ID=NO16G03200.1|Name=NO16G03200.1|organism=Nannochloropsis oceanica|type=CDS|length=1176bp|location=Sequence derived from alignment at chr16:959040..961861- (Nannochloropsis oceanica)
ATGCTCTACCGACAGGACGCGACAGTGATGACGCATTTGCTCCTCCGTCG
GGCACTTCCTTCGACCTCAAGGTCGAGCAGCCGCAGCGGCCTGTTGACCT
CCCCTATTGCAAGCACCGTCCTCAAGTGCCTCACCATGACCAGCGTCATG
TGGTATAGCGCCGCTTCGGCAAGCCCTTCTCCGCCTCCTCTGTTTCAATC
GCCCTTGGTGACGGTCGAGCAGGTGCGTGCGTCCCTCGCTGCCAGCAGCG
GCAGCGGTAGCGGTAGCGGCAACGCTAGGGACCGGAGCATCAAGTTCCTC
GACTCTTCCTGGCATTTGGACAAGACACGCGATGCCAAGAAAGAGTTTCT
AGAGGAGCACTTGCCCGGCGCCCAGTTCTTCGACATCGACGCCATCAGCG
ATAAATCCTCTCCTTTCCCCCACATGATTCCCACGGCCACCGCCTTTGCC
GAAGCCGCCTCCGCCCTGGGTTTGGAGAACAAGGACTATATCGTCGTCTA
TACGACCCAGAAATGCTTCAGTGCCGCGCGGTGTTGGTGGACCTTTCGTG
CGTTTGGGCACGAGAACGTCTTCGTTCTTCAGGGGGGGTTGCCCGCGTGG
AAGGCAGCGGGAGGGAAGGTGGAGAAGGGAGCTGCACAAGTGCGTTCGAG
TCGGCCGCCACAAGGGTTGGTGCAGCAGGGAGGGAATGCGTATTTGTTGG
GGAAGGAGGGATTCCAGGCCAAGATGAAGCCGGAGCTAGTCTACTCGTGG
CAGCAGGTGCTCACATTGGTGGAGTCGGCGAAGGACGAGAAGGACCGTAT
CGTGGACGCCAGGGGAGCGCCGAGATTCAATGCAGAGGTGGATGAGCCAC
GCCCGGGATTGGCAAGGGGCCATATCCCCGGCTCTGTGAATGTGCCGTTC
GACAAGGTCATGGTGGAGGGAGACTGGACGCGGTTCAAACCCAAGGAGGA
GATCTTCGAGGCTTTCCGGGCTGGAGGCCTGGACCTGATGGCACTACCGA
AGGAGAGGAAGGTCATCACCACGTGCGGGTCGGGCGTGACGGCGGCGGCC
TTGTCGTTTGCCATGGTGTTGGCAGGGAGGGAGGTGGAGGCGGTGCCTGT
ATTCGACGCCTCCTGGGCGGGATGGGGTCAGTTGAAGGGAGTGCCCATCG
AGCCCCCACCGGTCGACCGCTCATGA back to top
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