NO16G03170.2, NO16G03170.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO16G03170.2
Unique Name	NO16G03170.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4925
Alignment location	chr16:948874..956194 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr16	genome	chr16:948874..956194 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO16G03170.2 vs.
Match: CBN74091.1 (Adenylate kinase family protein [Ectocarpus siliculosus])

HSP 1 Score: 446.8 bits (1148), Expect = 1.300e-121
Identity = 263/599 (43.91%), Postives = 352/599 (58.76%), Query Frame = 0

Query:   93 ITSGAARDVDQGAVLSDANAAFA--YSTAEERRAASEPVGDEPQG--LKVVLTGKPCSGKGTQAPMMGRKYRMVHIATGNLLRAEIQAETELGLIAKEQMEKGELLPDELIIALVKKRVSADDCRRNGWILDGFPRTVRQAKLMQKAGIEPDAVIELDRPDELVEEWCLGRYHDAATGVIYHPKFNPPPPEIVPRLIWRTDDTPETLKRRLQIYREQTQPIYGLYPDCFYS-VNSAKNELEVLRDICHVLTMVGAARDPSKVAPR--REANAEDLVPDVPPPSREEEAQNKAEGREGLLEVVRRCNQYSLSDYLPVYLTLPEGKAGGREGGREGGDVLVGYAHRDFASELTLLLQGE---------GGGGVKVELDRYVELAPGAETVTQRTRAVADLVQSLTAAGVIAKEKIRNELMDVRPMLSPL-FKEPALFQIERGAMIKFGVPTHGVHINGYVRLPSSPAPASPPASPPASPPASHPASPPTSIHIWVGTRSPSKATYPGLLDVLAAGGQPSGLTFRENAFKEAEEEASIPRGLLEGLRPGGMISYRYQTRHGLSTKLLKVFDLELPPSFVPYNGDGEVESFQLMSLTDALHSL 675
            +T+   RDV+     S +N  +   Y   + RR A++       G  LK+++TGKP SGKG+ +PM+ R YR V+IA+GNLLR+E QAET LG  A E M +GE+LP E++++LV KR++  DC +NGWILDGFPRT  QA  +    I PD ++ L+RPD LV+E+ LGR  D  TGVIYHPKF+PPPP++VPRL WRTDDT + +++RL+ Y E ++ I   Y D     V+S+K++L+   ++C  +  V  A+   ++ P   RE      +         EE Q   E +  LL   +RCN+Y  SD+ PVY+                 DV VG     FASEL L   G+         G G V +E   YV LAP A +V +RTR V+ LVQ L   G I K  +RNEL DVR     L      LF++ER AMI FGVP++GVH+NGYV+                       A+    + +W+G RS SKATYPG+ D + AGGQP+G+ F+EN  KE EEEAS+P  L   ++P G +SYRY TR GLSTK L VFDLE+P  FVPYNGDGEVE F LM + +AL ++
Sbjct:    1 MTTEPYRDVESQEYKSKSNQPWQLKYHDIKTRRDAADARSKAYDGPPLKIIVTGKPSSGKGSISPMLSRAYRGVYIASGNLLRSEAQAETSLGRRANEFMSRGEMLPSEVVLSLVTKRLAQRDCAQNGWILDGFPRTRGQAADLGGEDIVPDLIVMLERPDGLVKEFSLGRCTDPTTGVIYHPKFSPPPPDVVPRLTWRTDDTKDVIEKRLKQYAETSEGIREAYEDVPRKVVDSSKSDLDTFAEVCDFVEEVAKAK-AERLGPEGMREILEMGDIRMSDVQRLTEEEQRAFEEQPTLLAAAQRCNRYVASDFTPVYVE----------------DVKVGAVSSQFASELNLFSSGDAVMYRASVPGAGPVGMEGPAYV-LAPYAASVEERTRVVSGLVQGLVDTGAIPKGALRNELQDVRSATGKLSVTGDVLFRLERAAMIHFGVPSYGVHLNGYVK-----------------------ATDTEPMRVWIGVRSVSKATYPGMWDQMVAGGQPAGMGFKENMQKECEEEASLPSSLSCKIQPTGQVSYRYGTRKGLSTKFLCVFDLEVPEDFVPYNGDGEVEEFILMPVEEALKTI 558

The following BLAST results are available for this feature:

BLAST of NO16G03170.2 vs.

BLAST of NO16G03170.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBN74091.1	1.300e-121	43.91	Adenylate kinase family protein [Ectocarpus silicu...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO16G03170	NO16G03170	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO16G03170.2	NO16G03170.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO16G03170.2.cds1	NO16G03170.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds2	NO16G03170.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds3	NO16G03170.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds4	NO16G03170.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds5	NO16G03170.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds6	NO16G03170.2.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds7	NO16G03170.2.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds8	NO16G03170.2.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds9	NO16G03170.2.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds10	NO16G03170.2.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds11	NO16G03170.2.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds12	NO16G03170.2.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds13	NO16G03170.2.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds14	NO16G03170.2.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds15	NO16G03170.2.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO16G03170.2.cds16	NO16G03170.2.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:948874..956194-
coding sequence from alignment at chr16:948874..956194-

mRNA sequence

>NO16G03170.2 ID=NO16G03170.2|Name=NO16G03170.2|organism=Nannochloropsis oceanica|type=mRNA|length=4925bp
GGAGGAGGAAGAGGGGGGGGGGAGAGGAAGACGGGTGGCCATACCATGGA
GGGAAGAGGAGGAGGAGGAGGAGGCGGCGGCGGCGATTGAGATTGAATGA
GGATAAGAGGAGGAGTTTGAGGACGTTCTGGCGCCGCGGAAGGTCCGCTG
TTGCTTCTTGGTTTTTTTGGAGATGCGCTTCTTGCCACTCGTGTACCAGT
TCATCAGCTTCTTAGGGGCCGGAGCGAGCAGATGTGACCGTAGCTTAGCC
TTTTCGGCTTTCACGGAGCTTCAAAACTTGGCGTGAAGGCGAAGGATACG
ACGTTCAGTTGTGTCGTCCTCCTCCTTATCTTGTCGTCGAACGTGCGCAA
TGCTTGCGGGGTTGTGGTGGATGCTGAGGGTAGGCAGAAGACGAAAGGGA
CCAGATTTTCACGCCTGGGGCTGGGGGTAGGGGGAAATGAGGAAGGTGGG
GAGGGTGTGAATGAGGTAAAGAGGATGAGGATGATCGATGATGATGAGGA
GGAGGGGCAGATGTAGGAAGGGAGGGAGGAGGGAGGAAGATAGGGAGGGG
AGGAGGCGTGAGCGAGGGGACTTGATGAGGCAGGACAATGCCAAGCTCAT
CCTCACAATCTCTACTCTTCGCATTTCATGCCTTTTTGGTGTGAGATTGC
AAATGGTTCTCTTGCATTTCTTCATTTTGGCTAAGGAACCAAACCAAGTC
TTACGTTCCTACCTCCCTTCGACGAAGAAAAGAACGAATGATTGCAGCTC
GCTTGAGGCTGGCCTACCGGGTGGTGCACAAGTGCCAAAAGTCTTTAATT
CACAAGCTCCCTGCAGTCAACCATGCCTTGCTGATTTACTGGCCATGCCT
TCTCAGACCTGCAGGCATGCGTTGTGCAAATTCGTCCGCAACTCGTGCAA
ACTCCCAGCCCGTTGTCGTTAACCTCTTCATTTCATTCCGACATAGCCAG
GTCTCACCGCTCACGCCGTCCTCACTAGCCACACACAGAACCGCACCAGC
AGCATAAGGAGGAGCTGCTTAATCCTGGAACGATGCCGCCCATGTCCCTA
TCCTATCGTTACCGGCCACCAGGCGCGACACACACCCCTTTCCGATTTTC
CTATCGCCTGCTTAACGTTGCCCTCCTCGCCTGCTTCCTGTCCTTGTCCG
ACGCCTTCGTCCCTACCACACCATACCCGGTGGATTTCGGTCGAAAGGCA
TCTTCCCGCTCTGCTGGCGTCAAGACAGCGGACAGTATTTCCCGCCTGTC
TCCGCTCCGTGCCCAGGACGCGGCCAAAGTGGAAGACCGTATCGATGACA
ACAAGCAGATCACCTCAGGCGCGGCGCGTGACGTGGATCAGGGGGCTGTC
TTGAGCGACGCGAATGCTGCATTCGCCTATAGCACAGCCGAGGAGCGGAG
GGCGGCCTCGGAGCCAGTGGGAGACGAGCCCCAGGGCCTAAAAGTGGTGC
TAACGGGCAAGCCGTGCTCGGGCAAGGGCACGCAAGCGCCAATGATGGGC
CGCAAGTACCGGATGGTTCACATCGCTACCGGTAACCTGCTCAGGGCCGA
GATCCAGGCGGAGACGGAGTTAGGCCTGATAGCGAAGGAGCAGATGGAGA
AGGGGGAGCTGCTCCCGGACGAGCTGATCATCGCCCTTGTCAAGAAACGG
GTCTCGGCGGACGACTGTCGGCGTAACGGCTGGATCTTGGACGGTTTCCC
CCGCACAGTTCGACAAGCCAAGCTTATGCAGAAAGCGGGCATTGAGCCTG
ACGCCGTGATCGAGCTCGACCGCCCGGACGAGCTCGTGGAAGAGTGGTGC
CTCGGCCGCTACCACGACGCCGCCACTGGTGTGATTTATCATCCCAAATT
TAACCCTCCCCCCCCCGAGATCGTCCCTCGGTTGATCTGGCGCACGGACG
ATACGCCCGAGACCCTGAAACGCCGCCTTCAGATCTACAGGGAGCAGACC
CAGCCAATTTACGGCCTCTACCCCGACTGCTTCTACTCCGTCAACTCTGC
CAAGAACGAGCTCGAGGTGCTGCGTGATATTTGCCACGTTCTGACCATGG
TCGGGGCTGCTCGCGACCCCTCCAAGGTGGCCCCCCGTCGAGAGGCTAAC
GCCGAGGACCTAGTGCCCGACGTTCCTCCCCCCTCTCGGGAGGAGGAAGC
ACAAAACAAGGCCGAGGGGAGAGAGGGGCTGCTGGAGGTGGTGCGACGCT
GCAACCAGTACAGCCTCAGCGACTACCTCCCTGTGTATCTCACCCTGCCC
GAGGGGAAGGCGGGGGGGAGGGAGGGGGGGAGGGAGGGGGGGGACGTGCT
CGTCGGGTACGCCCACCGGGATTTTGCCTCCGAATTGACACTTCTGCTGC
AAGGGGAGGGGGGCGGGGGGGTCAAGGTTGAGCTCGACCGGTACGTGGAG
CTGGCCCCGGGAGCGGAGACTGTCACCCAACGCACTCGCGCCGTGGCCGA
TCTGGTGCAGAGCCTCACGGCCGCAGGCGTCATTGCCAAGGAGAAGATTC
GCAACGAGCTGATGGACGTGAGGCCAATGCTCTCCCCGCTCTTCAAGGAA
CCTGCCCTATTCCAGATCGAACGCGGCGCCATGATCAAATTCGGGGTTCC
AACCCACGGGGTCCACATCAACGGATACGTCCGCCTTCCCTCCAGCCCTG
CCCCTGCCTCGCCCCCTGCCTCGCCTCCTGCCTCGCCCCCTGCCTCGCAC
CCTGCCTCGCCCCCAACATCCATCCACATATGGGTGGGCACGCGATCTCC
TTCCAAGGCCACCTACCCGGGGCTGCTCGATGTATTGGCAGCCGGCGGAC
AACCGTCAGGCCTGACGTTCCGTGAAAACGCTTTCAAGGAGGCGGAGGAG
GAGGCCAGCATTCCCAGGGGCCTGCTGGAGGGGCTTCGGCCCGGAGGAAT
GATTTCCTACAGGTACCAAACCCGGCACGGCCTGTCAACTAAGCTGCTCA
AGGTGTTCGACTTGGAGCTTCCTCCCTCCTTCGTGCCCTACAATGGTGAC
GGAGAGGTGGAGAGCTTCCAGTTGATGAGTCTCACAGACGCTCTCCACAG
CCTGGGTAGGGAGGAAAGGAGGGAGGGAGGGAGGGAAGAAGGAAGGGAGG
GAGGGAGGGAGGGAAGAAGGAAGGGAGGGAGGGAGAAAGAAGACGTTGGT
ATGGAAACCTACCGTCCAATGGCTGCAAATGCCACGAGCTGTCTTGTGTA
AGCATCTCTCACTGTCTCTTGTGTCTCTCTCCGTCACCCTTAGAACATAA
TCTGGGTCTGTGGAAGCCCAATGCGGCCTTGACGGTCTTAGACTTCGCGG
TGCGCCACGGGGCAGTGGACGCGGACCACGAGAACTACATCGAGATCTGT
CACCTGCTCCGAGGGGCCTTTACAGACAAGAAACAGAGTGAGCCGCGGAG
AAAGAGCAAAGGAGGATTCTACTTTGGGACGGAGTACGACTCGGACTGAG
GAGTCGGAGGGCAGTGGATGATGTGTGTATATATACATATATGTTGTCAC
CCAAGCTGGTCAACAGGTGAGCTTCGTCTGAATGTATTTCCTTCCCTGTC
CGGTCGCGCTCATGTTCTCCTCGTGAAAAAGGGCGGGGGTGGGGAGGAAA
GGAAGGAGGAACTCGGTGTTATAATGTGGGAATGGGGCATGATTATGGGC
ATGTGGCTTAATGTAAATGAGGAATGCGCCGCCTCTTTTCCCTCCCTCCT
TCCGTCGGTCTCTGTGTGTGTCTGTGTGTGTGTGTGTGTATCTGTGTCTG
TGCAGTGGAGACGGGTATAGGGGGAAAGAAAGATCTTGCGGCATAGGATA
CATTCATTGCAAGGAGAGTGGGCAAAGAATGATGACGTAGAAGGAGGAGG
CGAATGACAAAGAGAATAGTGAAAAAGGAGTAAGGGGAAGTAGCACCCAA
AAAGAGGACGGGGGTGAGAGCAGAGCCCTGTGCCGAGCAATGGCTGCAAG
AGAAAGGCGGGCCAGCTCTCACGAGTCGTACTCGCTGCCAACAAGTGAAT
CACAAACCGTCAAAGTGAAAGAGATGAGAAGGGCAGGAATGCCTGCTACC
TGCCCTCATTGTACAAGTCAGGGACACAGAAAGAGCTTCCAAAGCGCGGC
ATGCACGTCTGCTTGAAGCTCCATGAGAAGGAGATAAGCACAAAAATAAT
GATTTATTTGCCACATGAAATCTTTACTCGACATTTCCAGTCATTGCTGT
ATCGTTACTTACTTCCCCATATCTGTCTATCTATTTTCACAACTTTTGCA
ATTTCTGTCTCACTCACGCACAAAACCACTAATCAGATCTTCATTGAGCA
CCTACCAACGCCCCCTCCCCTCCCTCCCTTCCCCCCCTTCCCCTCCCTCT
GCTCCTTCTCCTCGACTGGAAGAAGATCGGCTGGTCGAAATCGCCTCCTT
CCGTCTTCCACTGCATTCTAACCATCGTCCTCATTACCCCTCCATCATTC
CCTCCTCCTTTCCCTTTCCTCCCCCCTCCCTCCCCGTCCCTCTTCTGTTG
ATGGGCGCCCCCCACTTGACGGCGCGCTCCACCACCTCTTCCTCCCCCCC
GACCTCCATGCCGTGCAGTCGGATGGCTTCCTCTCTGCAAAGGGTCAGGA
AGAAGCGAGGGGGATGGATGGGCATATGCACGCTGGATAGACAACAAGGC
GGATACGACGAAAGCGTAAATACGAAGGGAGGGAGAGAGGGAGGGAGGGA
GAAAGGAGGGGAGGTAGCAAAGACGTACCGCAAGCCCCTTCCCATTTCGT
CGTCCCCTTCGCAAAAGCAGGCTGTCAGGGCAGCTTGATAGAGCCCTCTC
TCCGCCCGTAGCCCCCAGCCCTTGTTGCGCATGACACGCAAGGTTTGATA
CATGCCCTCTGCGTCACTGGTACGGCGGCAGGCAAGGAGGACCTGGGGAG
GGAGGGAGGGCGGGAGGGAGGGCGG

protein sequence of NO16G03170.2

>NO16G03170.2-protein ID=NO16G03170.2-protein|Name=NO16G03170.2|organism=Nannochloropsis oceanica|type=polypeptide|length=723bp
MPPMSLSYRYRPPGATHTPFRFSYRLLNVALLACFLSLSDAFVPTTPYPV
DFGRKASSRSAGVKTADSISRLSPLRAQDAAKVEDRIDDNKQITSGAARD
VDQGAVLSDANAAFAYSTAEERRAASEPVGDEPQGLKVVLTGKPCSGKGT
QAPMMGRKYRMVHIATGNLLRAEIQAETELGLIAKEQMEKGELLPDELII
ALVKKRVSADDCRRNGWILDGFPRTVRQAKLMQKAGIEPDAVIELDRPDE
LVEEWCLGRYHDAATGVIYHPKFNPPPPEIVPRLIWRTDDTPETLKRRLQ
IYREQTQPIYGLYPDCFYSVNSAKNELEVLRDICHVLTMVGAARDPSKVA
PRREANAEDLVPDVPPPSREEEAQNKAEGREGLLEVVRRCNQYSLSDYLP
VYLTLPEGKAGGREGGREGGDVLVGYAHRDFASELTLLLQGEGGGGVKVE
LDRYVELAPGAETVTQRTRAVADLVQSLTAAGVIAKEKIRNELMDVRPML
SPLFKEPALFQIERGAMIKFGVPTHGVHINGYVRLPSSPAPASPPASPPA
SPPASHPASPPTSIHIWVGTRSPSKATYPGLLDVLAAGGQPSGLTFRENA
FKEAEEEASIPRGLLEGLRPGGMISYRYQTRHGLSTKLLKVFDLELPPSF
VPYNGDGEVESFQLMSLTDALHSLGREERREGGREEGREGGREGRRKGGR
EKEDVGMETYRPMAANATSCLV*

mRNA from alignment at chr16:948874..956194-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO16G03170.2 ID=NO16G03170.2|Name=NO16G03170.2|organism=Nannochloropsis oceanica|type=mRNA|length=7321bp|location=Sequence derived from alignment at chr16:948874..956194- (Nannochloropsis oceanica)
GGAGGAGGAAGAGGGGGGGGGGAGAGGAAGACGGGTGGCCATACCATGGA
GGGAAGAGGAGGAGGAGGAGGAGGCGGCGGCGGCGATTGAGATTGAATGA
GGATAAGAGGAGGAGTTTGAGGACGTTCTGGCGCCGCGGAAGGTCCGCTG
TTGCTTCTTGGTTTTTTTGGAGATGCGCTTCTTGCCACTCGTGTACCAGT
TCATCAGCTTCTTAGGGGCCGGAGCGAGCAGATGTGACCGTAGCTTAGCC
TTTTCGGCTTTCACGGAGCTTCAAAACTTGGCGTGAAGGCGAAGGATACG
ACGTTCAGTTGTGTCGTCCTCCTCCTTATCTTGTCGTCGAACGTGCGCAA
TGCTTGCGGGGTTGTGGTGGATGCTGAGGGTAGGCAGAAGACGAAAGGGA
CCAGATTTTCACGCCTGGGGCTGGGGGTAGGGGGAAATGAGGAAGGTGGG
GAGGGTGTGAATGAGGTAAAGAGGATGAGGATGATCGATGATGATGAGGA
GGAGGGGCAGATGTAGGAAGGGAGGGAGGAGGGAGGAAGATAGGGAGGGG
AGGAGGCGTGAGCGAGGGGACTTGATGAGGCAGGACAATGCCAAGCTCAT
CCTCACAATCTCTACTCTTCGCATTTCATGCCTTTTTGGTGTGAGATTGC
AAATGGTTCTCTTGCATTTCTTCATTTTGGCTAAGGAACCAAACCAAGTC
TTACGTTCCTACCTCCCTTCGACGAAGAAAAGAACGAATGATTGCAGCTC
GCTTGAGGCTGGCCTACCGGGTGGTGCACAAGTGCCAAAAGTCTTTAATT
CACAAGCTCCCTGCAGTCAACCATGCCTTGCTGATTTACTGGCCATGCCT
TCTCAGACCTGCAGGCATGCGTTGTGCAAATTCGTCCGCAACTCGTGCAA
ACTCCCAGCCCGTTGTCGTTAACCTCTTCATTTCATTCCGACATAGCCAG
GTCTCACCGCTCACGCCGTCCTCACTAGCCACACACAGAACCGCACCAGC
AGCATAAGGAGGAGCTGCTTAATCCTGGAACGATGCCGCCCATGTCCCTA
TCCTATCGTTACCGGCCACCAGGCGCGACACACACCCCTTTCCGATTTTC
CTATCGCCTGCTTAACGTTGCCCTCCTCGCCTGCTTCCTGTCCTTGTCCG
ACGCCTTCGTCCCTACCACACCATACCCGGTGGATTTCGGTCGAAAGGCA
TCTTCCCGCTCTGCTGGCGTCAAGACAGGTGCGTGATGGCTCGCCTGATC
CAATTTGTGCAGGACGTTTGTCCATCACATCGGCTCCGGCACGACGAGAT
GAGGTGGCATGCTCACACGTTTCGTCCCTCTACCTGACCGCCTCTCTTCA
TTATGTCATTATTATGCCAACTTGCTTATCTTCCGTTCCATCCATCTGTT
CACTCCTTTTCTCGACAATATTCCCCTTTCTCGTAGCGGACAGTATTTCC
CGCCTGTCTCCGCTCCGTGCCCAGGACGCGGCCAAAGTGGAAGACCGTAT
CGATGACAACAAGGTAGGGCGGAGGGATGAGTGGAAGGAGGGAATGGATT
TTGATGTATGAGCGTACAACAACGAGTAAGCTTCCCATGTTCACGTCTCC
CACCCTTTCTCCCTTTCTTCCTTCCTTCCCTTCAGCAGATCACCTCAGGC
GCGGCGCGTGACGTGGATCAGGGGGCTGTCTTGAGCGACGCGAATGCTGC
ATTCGCCTATAGCACAGCCGAGGAGCGGAGGGCGGCCTCGGAGCCAGTGG
GAGGTAGGGAGGGAGAGAAAGGAGGGAAGGGAGGGAATGCATGGAGGAAA
AGCAGGGAGGGAAAAGGTGGAAGAAACGGGTTGAGCGGCTAGCGTCTTCT
CCAAGGGACGAAGCTGTCGAGAAAGCGCATGACTCACCCTTCCCTCCCTC
CCTCCGTCCCAGACGAGCCCCAGGGCCTAAAAGTGGTGCTAACGGGCAAG
CCGTGCTCGGGCAAGGGCACGCAAGCGCCAATGATGGGCCGCAAGTACCG
GATGGTTCACATCGCTACCGGTGCGTGCGGCGTTGGCCCGCCCTCCCTCC
CTCCCCCCCTCCCTCCCTCCCTCCTTGTGGGCAACGTGTGCTATCCACCC
TCCCTCCCTCCCTTCCTTCCCCCCTCCCACCTACCCTCCCTCCCTCAATT
CGGTCAATCTCGCCGTGTGCGACCCACCTCCTTTCCCCTCTTTCTTCCGT
CCTTTTATACACCCATCCCTCCCTCCCTCGCTCGCTCCCTCCCTTCCTCC
CCCGTATCCATCCAGGTAACCTGCTCAGGGCCGAGATCCAGGCGGAGACG
GAGTTAGGCCTGATAGCGAAGGAGCAGATGGAGAAGGGGGAGCTGCTCCC
GGACGAGCTGATCGTAAGGGGAAGGAGGGAGAGAGGGAGGGAGGGAAAGA
GGGAGAGAGGGAGTCTGATTGGGGTTTAATTAAGTAGTACCTTTGCGCCT
GTTAGCGTGTACGGCCCTTGGTGGTGGTGTTGTCGTCATCCCATCCACTC
TCTTTCTTGCTCTCCCTTCCTCCCTCCCTCCCTCACTCCCTCCCTCCAGA
TCGCCCTTGTCAAGAAACGGGTCTCGGCGGACGACTGTCGGCGTAACGGC
TGGATCTTGGACGGTTTCCCCCGCACAGTTCGACAAGCCAAGCTTATGCA
GGTACACCTATCCCTCCCTCCATCCCTCCATCCCTCCCTCGCTCCATCCC
TCCTTGCACCCTCCCTCGCTCCCTCCCTCTTTCCCTTTCTTCATCCTCTT
GTCTATCTCCAAGGACCCAGGAGGCCTCGCGCCTGCCCTCTCACGTCTTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTTCCCTCGCTCCTCTAG
AAAGCGGGCATTGAGCCTGACGCCGTGATCGAGCTCGACCGCCCGGACGA
GCTCGTGGAAGAGTGGTGCCTCGGCCGCTACCACGACGCCGCCACTGGTC
GGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCGTTAAC
CTGTACTCACACGCTGACCCTTCCTACCTCCCCCTCCCTCTCCCCCCCCC
TCCTTTCTGCGGCCTTAGGTGTGATTTATCATCCCAAATTTAACCCTCCC
CCCCCCGAGATCGTCCCTCGGTTGATCTGGCGCACGGACGATACGCCCGA
GACCCTGGTATGCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
TTCCCACGTGCCTTCCTTCCCTCCCGCCATTCCCCCTTTGGTTACATCCT
CATCATTCGCCTCCCTCCCTCCCTCCCTCCCTCAGAAACGCCGCCTTCAG
ATCTACAGGGAGCAGACCCAGCCAATTTACGGCCTCTACCCCGACTGCTT
CTACTCCGTCAACTCTGCCAAGAACGAGCTCGAGGTAAGCCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCTCCTCCTCCCTCCTCTTCTTGCT
TGCTCCTTCCATTGCACCCATCTTACACCCCCTCCCTCCCTCCCTCCCTC
TCTCCCTACCTCCAGGTGCTGCGTGATATTTGCCACGTTCTGACCATGGT
CGGGGCTGCTCGCGACCCCTCCAAGGTAGGCCCCTCCCTCCCTCCCTCCC
TCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCTTCCCTCCTTCCCTC
CTTCCCTCCTCTCTCTCCCTCCTTTCTCTCCCCTCCCCCCCCTCTCTCTC
TCTCTCTCATTCTTTCTTTCCCTTCCTCCATTTTTTTCACCGTCCGTCCC
TCCCTCCGTCCCGCCCTCCGTCCCTCCCTCAGGTGGCCCCCCGTCGAGAG
GCTAACGCCGAGGACCTAGTGCCCGACGTTCCTCCCCCCTCTCGGGAGGA
GGAAGCACAAAACAAGGCCGAGGGGAGAGAGGGGCTGCTGGAGGTGGTGC
GACGGTAAGGAGGGAGGGAGGGAAGGTAAGGGGGAGGAGGAGACCGAAGA
GGTTGTTGCTCTTTGTGCGTATTCTTACTCCCTTTTTTTCTCCCTCCCTC
CCTCGGCTTCTCCGCAGCTGCAACCAGTACAGCCTCAGCGACTACCTCCC
TGTGTATCTCACCCTGCCCGAGGGGAAGGCGGGGGGGAGGGAGGGGGGGA
GGGAGGGGGGGGACGTGCTCGTCGGGTACGCCCACCGGGATTTTGCCTCC
GAATTGACACTTCTGCTGCAAGGGGAGGGGGGCGGGGGGGTCAAGGTCAG
GAGGGAGGGAAGGAGGGAAGGGAAGGGGAGGGAAGGAGGGAAGGGAAGGG
GAGGGAGAGAACGGAGAGGTCGACAGTGACCCTTGCGGTTGCTCACCTCC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGTAGGTTGAGCT
CGACCGGTACGTGGAGCTGGCCCCGGGAGCGGAGACTGTCACCCAACGCA
CTCGCGCCGTGGCCGATCTGGTGCAGAGCCTCACGGCCGCAGGCGTCATT
GCCAAGGTAGGTAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAG
GATTCCATATGAGTAGTACTCAAATCCTTTGTTCTTTCCTCTCCCTTCCT
CCCTCCCTCCCTCCCTCCCTCCCTTTTGCAGGAGAAGATTCGCAACGAGC
TGATGGACGTGAGGCCAATGCTCTCCCCGCTCTTCAAGGAACCTGCCCTA
TTCCAGATCGAACGGTCAGGAGGGAAGGAGGGAAGGAGAGAGGACAGAGA
GACACGGAGGGTTTTCCGACTAACACGTCTCATCGACCATTCCCCCCTCC
CTCCCTCCCTCCCTCCCTCCACAGCGGCGCCATGATCAAATTCGGGGTTC
CAACCCACGGGGTCCACATCAACGGATACGTCCGCCTTCCCTCCAGCCCT
GCCCCTGCCTCGCCCCCTGCCTCGCCTCCTGCCTCGCCCCCTGCCTCGCA
CCCTGCCTCGCCCCCAACATCCATCCACATATGGGTGGGCACGCGATCTC
CTTCCAAGGCCACCTACCCGGGGCTGCTCGATGTATTGGCAGCCGGCGGA
CAACCGTCAGGCCTGACGTTCCGTGAAAACGCTTTCAAGGAGGCGGAGGA
GGAGGCCAGCATTCCCAGGGGCCTGCTGGAGGGGCTTCGGCCCGGAGGAA
TGATTTCCTACAGGTACGGAGGGAGGGAGGGAGGGAGGGAGAGAGAGGGA
ACGCAGGGGAAGAAAGGAGGGGAGGAAAGATCTGAGGATTGCTCGTCTTT
CGTCGTCCTGTTCTCGATCGATTCTCACATCCACGATTCCCTCCTTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTCTCCTTCCCTT
CCTACCAGGTACCAAACCCGGCACGGCCTGTCAACTAAGCTGCTCAAGGT
GTTCGACTTGGAGCTTCCTCCCTCCTTCGTGCCCTACAATGGTGACGGAG
AGGTGGAGAGCTTCCAGTTGATGAGTCTCACAGACGCTCTCCACAGCCTG
GGTAGGGAGGAAAGGAGGGAGGGAGGGAGGGAAGAAGGAAGGGAGGGAGG
GAGGGAGGGAAGAAGGAAGGGAGGGAGGGAGAAAGAAGACGTTGGTATGG
AAACCTACCGTCCAATGGCTGCAAATGCCACGAGCTGTCTTGTGTAAGCA
TCTCTCACTGTCTCTTGTGTCTCTCTCCGTCACCCTTAGAACATAATCTG
GGTCTGTGGAAGCCCAATGCGGCCTTGACGGTCTTAGACTTCGCGGTGCG
CCACGGGGCAGTGGACGCGGACCACGAGAACTACATCGAGATCTGTCACC
TGCTCCGAGGGGCCTTTACAGACAAGAAACAGAGTGAGCCGCGGAGAAAG
AGCAAAGGAGGATTCTACTTTGGGACGGAGTACGACTCGGACTGAGGAGT
CGGAGGGCAGTGGATGATGTGTGTATATATACATATATGTTGTCACCCAA
GCTGGTCAACAGGTGAGCTTCGTCTGAATGTATTTCCTTCCCTGTCCGGT
CGCGCTCATGTTCTCCTCGTGAAAAAGGGCGGGGGTGGGGAGGAAAGGAA
GGAGGAACTCGGTGTTATAATGTGGGAATGGGGCATGATTATGGGCATGT
GGCTTAATGTAAATGAGGAATGCGCCGCCTCTTTTCCCTCCCTCCTTCCG
TCGGTCTCTGTGTGTGTCTGTGTGTGTGTGTGTGTATCTGTGTCTGTGCA
GTGGAGACGGGTATAGGGGGAAAGAAAGATCTTGCGGCATAGGATACATT
CATTGCAAGGAGAGTGGGCAAAGAATGATGACGTAGAAGGAGGAGGCGAA
TGACAAAGAGAATAGTGAAAAAGGAGTAAGGGGAAGTAGCACCCAAAAAG
AGGACGGGGGTGAGAGCAGAGCCCTGTGCCGAGCAATGGCTGCAAGAGAA
AGGCGGGCCAGCTCTCACGAGTCGTACTCGCTGCCAACAAGTGAATCACA
AACCGTCAAAGTGAAAGAGATGAGAAGGGCAGGAATGCCTGCTACCTGCC
CTCATTGTACAAGTCAGGGACACAGAAAGAGCTTCCAAAGCGCGGCATGC
ACGTCTGCTTGAAGCTCCATGAGAAGGAGATAAGCACAAAAATAATGATT
TATTTGCCACATGAAATCTTTACTCGACATTTCCAGTCATTGCTGTATCG
TTACTTACTTCCCCATATCTGTCTATCTATTTTCACAACTTTTGCAATTT
CTGTCTCACTCACGCACAAAACCACTAATCAGATCTTCATTGAGCACCTA
CCAACGCCCCCTCCCCTCCCTCCCTTCCCCCCCTTCCCCTCCCTCTGCTC
CTTCTCCTCGACTGGAAGAAGATCGGCTGGTCGAAATCGCCTCCTTCCGT
CTTCCACTGCATTCTAACCATCGTCCTCATTACCCCTCCATCATTCCCTC
CTCCTTTCCCTTTCCTCCCCCCTCCCTCCCCGTCCCTCTTCTGTTGATGG
GCGCCCCCCACTTGACGGCGCGCTCCACCACCTCTTCCTCCCCCCCGACC
TCCATGCCGTGCAGTCGGATGGCTTCCTCTCTGCAAAGGGTCAGGAAGAA
GCGAGGGGGATGGATGGGCATATGCACGCTGGATAGACAACAAGGCGGAT
ACGACGAAAGCGTAAATACGAAGGGAGGGAGAGAGGGAGGGAGGGAGAAA
GGAGGGGAGGTAGCAAAGACGTACCGCAAGCCCCTTCCCATTTCGTCGTC
CCCTTCGCAAAAGCAGGCTGTCAGGGCAGCTTGATAGAGCCCTCTCTCCG
CCCGTAGCCCCCAGCCCTTGTTGCGCATGACACGCAAGGTTTGATACATG
CCCTCTGCGTCACTGGTACGGCGGCAGGCAAGGAGGACCTGGGGAGGGAG
GGAGGGCGGGAGGGAGGGCGG

Coding sequence (CDS) from alignment at chr16:948874..956194-

>NO16G03170.2 ID=NO16G03170.2|Name=NO16G03170.2|organism=Nannochloropsis oceanica|type=CDS|length=2169bp|location=Sequence derived from alignment at chr16:948874..956194- (Nannochloropsis oceanica)
ATGCCGCCCATGTCCCTATCCTATCGTTACCGGCCACCAGGCGCGACACA
CACCCCTTTCCGATTTTCCTATCGCCTGCTTAACGTTGCCCTCCTCGCCT
GCTTCCTGTCCTTGTCCGACGCCTTCGTCCCTACCACACCATACCCGGTG
GATTTCGGTCGAAAGGCATCTTCCCGCTCTGCTGGCGTCAAGACAGCGGA
CAGTATTTCCCGCCTGTCTCCGCTCCGTGCCCAGGACGCGGCCAAAGTGG
AAGACCGTATCGATGACAACAAGCAGATCACCTCAGGCGCGGCGCGTGAC
GTGGATCAGGGGGCTGTCTTGAGCGACGCGAATGCTGCATTCGCCTATAG
CACAGCCGAGGAGCGGAGGGCGGCCTCGGAGCCAGTGGGAGACGAGCCCC
AGGGCCTAAAAGTGGTGCTAACGGGCAAGCCGTGCTCGGGCAAGGGCACG
CAAGCGCCAATGATGGGCCGCAAGTACCGGATGGTTCACATCGCTACCGG
TAACCTGCTCAGGGCCGAGATCCAGGCGGAGACGGAGTTAGGCCTGATAG
CGAAGGAGCAGATGGAGAAGGGGGAGCTGCTCCCGGACGAGCTGATCATC
GCCCTTGTCAAGAAACGGGTCTCGGCGGACGACTGTCGGCGTAACGGCTG
GATCTTGGACGGTTTCCCCCGCACAGTTCGACAAGCCAAGCTTATGCAGA
AAGCGGGCATTGAGCCTGACGCCGTGATCGAGCTCGACCGCCCGGACGAG
CTCGTGGAAGAGTGGTGCCTCGGCCGCTACCACGACGCCGCCACTGGTGT
GATTTATCATCCCAAATTTAACCCTCCCCCCCCCGAGATCGTCCCTCGGT
TGATCTGGCGCACGGACGATACGCCCGAGACCCTGAAACGCCGCCTTCAG
ATCTACAGGGAGCAGACCCAGCCAATTTACGGCCTCTACCCCGACTGCTT
CTACTCCGTCAACTCTGCCAAGAACGAGCTCGAGGTGCTGCGTGATATTT
GCCACGTTCTGACCATGGTCGGGGCTGCTCGCGACCCCTCCAAGGTGGCC
CCCCGTCGAGAGGCTAACGCCGAGGACCTAGTGCCCGACGTTCCTCCCCC
CTCTCGGGAGGAGGAAGCACAAAACAAGGCCGAGGGGAGAGAGGGGCTGC
TGGAGGTGGTGCGACGCTGCAACCAGTACAGCCTCAGCGACTACCTCCCT
GTGTATCTCACCCTGCCCGAGGGGAAGGCGGGGGGGAGGGAGGGGGGGAG
GGAGGGGGGGGACGTGCTCGTCGGGTACGCCCACCGGGATTTTGCCTCCG
AATTGACACTTCTGCTGCAAGGGGAGGGGGGCGGGGGGGTCAAGGTTGAG
CTCGACCGGTACGTGGAGCTGGCCCCGGGAGCGGAGACTGTCACCCAACG
CACTCGCGCCGTGGCCGATCTGGTGCAGAGCCTCACGGCCGCAGGCGTCA
TTGCCAAGGAGAAGATTCGCAACGAGCTGATGGACGTGAGGCCAATGCTC
TCCCCGCTCTTCAAGGAACCTGCCCTATTCCAGATCGAACGCGGCGCCAT
GATCAAATTCGGGGTTCCAACCCACGGGGTCCACATCAACGGATACGTCC
GCCTTCCCTCCAGCCCTGCCCCTGCCTCGCCCCCTGCCTCGCCTCCTGCC
TCGCCCCCTGCCTCGCACCCTGCCTCGCCCCCAACATCCATCCACATATG
GGTGGGCACGCGATCTCCTTCCAAGGCCACCTACCCGGGGCTGCTCGATG
TATTGGCAGCCGGCGGACAACCGTCAGGCCTGACGTTCCGTGAAAACGCT
TTCAAGGAGGCGGAGGAGGAGGCCAGCATTCCCAGGGGCCTGCTGGAGGG
GCTTCGGCCCGGAGGAATGATTTCCTACAGGTACCAAACCCGGCACGGCC
TGTCAACTAAGCTGCTCAAGGTGTTCGACTTGGAGCTTCCTCCCTCCTTC
GTGCCCTACAATGGTGACGGAGAGGTGGAGAGCTTCCAGTTGATGAGTCT
CACAGACGCTCTCCACAGCCTGGGTAGGGAGGAAAGGAGGGAGGGAGGGA
GGGAAGAAGGAAGGGAGGGAGGGAGGGAGGGAAGAAGGAAGGGAGGGAGG
GAGAAAGAAGACGTTGGTATGGAAACCTACCGTCCAATGGCTGCAAATGC
CACGAGCTGTCTTGTGTAA

Synonyms

Publications