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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr16 | genome | chr16:874582..878296 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G02990.5 vs.
Match: OJU84559.1 (hypothetical protein BGO11_16195 [Solirubrobacterales bacterium 70-9]) HSP 1 Score: 301.2 bits (770), Expect = 6.600e-78 Identity = 181/424 (42.69%), Postives = 250/424 (58.96%), Query Frame = 0
Query: 1 MAQYGFGRWNFPDAGANQMLSECADCNSTTGHNDFRFMNDVGNVVDGKEGAIAFIEYAAAQAQGQGK-PFFMVLSLINPHDVLFQPQQ-FAASGYNETFLDGEIDLPMSVNESLSTKPTSQLQYRNIGIGAGITPSGYEEQLGYINFYGNLQKLVDSYVVQTLDKLTETGLLEDTLIVNMADHGEMGLSHGGQIQKDFNFYEETLRIPLTFSNPKLFPTPLESEQLVSLVDLLPTLATLLDAPKSAYPSRKKKWSGVDFSSVVLNPRKTKKVQDYTIFTFDDYTSGQPTVLANGTVGAWPQEPAHLSMRISVFRVFLSLSDLCPRTLALFHTNTHTNSLHCLCHNRILLVGIREKRWKIAMYYDPAEAVTKTPRQWELYDRLTDPEELNNLAYSNAIRTKAQERQYRRLQKKLKRVIQKRLGPV 423
+ +YGF RW+ PDAGANQ + + + +ND R + G + KEGA+ +IE A G GK PFF+++SL+NPHDVLF P + F SGY+ ++L G+I++P + E LSTKPT Q ++ I G P E+ Y+NFYGNL + D+Y+V+ L+KL GL EDTLI+ +DHGEMGLSHGG QK+FNFYEE+L++PL +SNPK+FP P+ S+ LVS VDLLPTLA+L DAPK+A ++ W GVD+S +VLNP + K+ QDY FT+DD+ SGQ T G +P++P H+ S+ + + T + G + +W+ MY D TDP E NLA+ RT AQE Q+ RL+KKL+RV + RL P+
Sbjct: 175 LERYGFSRWDPPDAGANQSIPQAGGGYT---NNDGRIIESKGPYQESKEGALQYIEEVA----GLGKRPFFLIISLVNPHDVLFYPSRTFEESGYDTSWLAGDIEVPPTSEEDLSTKPTVQEEFLKIFNLTG-KPKKEAEKKAYLNFYGNLMRSSDNYLVEVLNKLEAKGLYEDTLIIRTSDHGEMGLSHGGLRQKNFNFYEESLKVPLVYSNPKMFPRPVTSDALVSHVDLLPTLASLADAPKAA----RRNWQGVDYSDIVLNPHRGKEPQDYIAFTYDDFQSGQHT-------GPYPKQPNHVR----------SIREKRWKLAKYVDIKTEVKEA-----KPVERPGPKPPQWE--MY-----------------DLKTDPNEEINLAFEGYERTPAQEAQFIRLKKKLERVEKTRLKPL 545
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G02990.5 ID=NO16G02990.5|Name=NO16G02990.5|organism=Nannochloropsis oceanica|type=mRNA|length=3008bp CGAGACTTTAACTGAACCACCACTTGATCACACTCCAGCACCTATGGTAT CCTTACACACCGCATACGCTACATGCCGTATCACATTGGCCTGCTTCAGC ATGGATGATAGGCTATATGAGACCTTGTCAAAGTACAGGCAAGCCAGTTC CTTTTGTGAAGCTTTCTACATATGGGATGACGTTATGAGGGCGGCTGTCA AGTGCCTGTGTGAGGAGTTAATTCCCAGACGTGTTATGGGGCGACTATAT GTACTTGTCTACATCATATTCTATAACGCTGTTCGATTATGAATGAACTC CCGAACATCCTGCGAAGGGATATCAATCAGTCCTCTCGAAAATAGATACC ACGGTTACGACAAGGCCATGGCATGGCCTGCTCACCATTACCATCGGAAG GCGTGTAACATTGATACGCCGACGCCAAACCAAGCCCTAAGCTTGCAATA GTAGCATTCCCCCAAACCGGCCCTCATTGCGAGGCCGGGTCACATAAACT CCACACCATGTCCATGAGTAATATTATCGCAGCAACTGTGCGGTATATTT TCCGGAGGCAATTTCCAACTCTGATCCCTGTGTCTATCCTATCCTACAGG GAGATTTATTGGAAGGAAGCATACAATGACGTCGTCTTCGTTCCTCATTC GCGTGCTGGGCACTGGTGCTTTCTTTCTCTTGGGCGTCCTTTCCGGAAAG ACGGACGCCAAGAAGGGGCCCGATCCCAAATTACAAATTGACGATTTCAG AGGGAAAAATGTCATCATTCTTATCATTGATCAGATGCGTCAAATTCAAG ATTTTCCACCCGGCTGGAGCGAGGCGAATTTGCCTGGCCTCACCCGACTG CAGCAAAACGGCTTAACGTTTACCCAAGCCACGTGTAACGCAGCAATGTG CAGTCCATCGCGTGCGACGCTATTTACAGGAAGATTTCCGGCACAGCATG GAGTACGATGGGTGCTGGAAGAGGGAATGCCGGAAACGAAGTACCCGCAA CGCAATATGCCCCTTCCCGATCAGCTCGATAATATGGCGACCATGGCAAT AGAGGCCGGTTACGAAGGTGGGGGGTTAGAGACGTTTCTTTCACTTTCTG TTATCTTTCCTCCCTTCCTGATTTTCTGACAAACACTAACTTATTTTCCC GTCCTTTGTTCCTATTTGTTCATCATTTCCTGCACTACCGTTCCTTTTTC AGCCGTCTTCAAAGGGAAGTTCCATTGTGTCAAGAAGAGCACTGGTTCTA ATGGGACATGGATTGGCTACGACATGGCGCAATACGGTTTCGGAAGATGG AATTTTCCGGACGCTGGGGCAAATCAAATGCTATCCGAGTGCGCAGACTG TAATTCTACGACTGGCCATAACGACTTTCGATTTATGAACGACGTGGGAA ATGTGGTTGATGGAAAGGAGGGCGCAATTGCATTCATCGAGTACGCCGCT GCGCAAGCCCAAGGCCAAGGAAAGCCTTTTTTCATGGTTTTATCCTTGAT AAACCCTCACGACGTCCTCTTCCAGCCCCAACAATTCGCCGCGTCAGGCT ATAACGAGACATTTTTAGATGGAGAAATCGACCTCCCGATGTCAGTTAAT GAAAGCTTATCAACCAAGCCCACGTCTCAGTTGCAGTACCGAAACATTGG TATCGGGGCAGGCATCACACCCAGCGGATATGAGGAGCAGCTGGGCTACA TCAACTTTTACGGCAACCTTCAAAAGCTAGTTGACTCGTATGTGGTCCAA ACTCTTGACAAGCTGACCGAGACGGGCCTCCTGGAGGACACTCTGATAGT CAATATGGCCGACCACGGGGAAATGGGCCTGTCACACGGGGGTCAGATTC AAAAAGATTTCAATTTCTACGAGGAAACTTTGAGAATTCCTTTGACTTTT TCGAATCCCAAGCTCTTTCCGACGCCTTTGGAAAGTGAGCAGCTTGTTTC ACTCGTGGATCTACTCCCCACGTTGGCCACCCTTTTAGACGCGCCCAAGA GTGCCTACCCTTCGCGTAAGAAAAAATGGTCGGGGGTAGATTTCTCGTCG GTGGTTCTCAACCCTCGCAAGACCAAAAAAGTGCAGGACTATACGATTTT TACTTTTGATGACTACACGAGCGGGCAACCTACTGTTTTGGCGAACGGCA CAGTCGGAGCTTGGCCTCAGGAGCCCGCCCATCTAAGTATGAGAATTTCT GTCTTCCGCGTCTTCCTTTCCCTTTCTGACCTCTGTCCACGCACCCTAGC TCTCTTTCATACAAATACACACACTAACTCACTACACTGCCTCTGCCATA ACCGCATCCTCCTAGTCGGCATTCGCGAGAAGCGCTGGAAAATAGCCATG TATTATGATCCTGCTGAAGCCGTCACAAAAACGCCGCGACAGTGGGAGCT CTATGATCGCTTAACGGACCCCGAAGAGCTAAATAATTTGGCCTACAGCA ATGCCATCCGCACCAAGGCGCAAGAGCGGCAATACAGGCGATTGCAAAAG AAATTAAAGCGCGTCATTCAGAAGCGCCTGGGGCCCGTGCCCCTTGAACG CTCCATTGAAATGATCGTCACGACCAATTCTTCTGCCATTCCTAACAAGA AAGAAACCTTGTCTCAAGAAGGCCCAGCCAGTGGCGTGCCCATAGGTCAA GGGACACTTTTTACAACTGTGAGATTGCGGAGATGTGAGGGGTTGGATAT CCGTACGTGCGACTCGGCCTACATCAAATTTACTGTGTCCAGCCGCAGCG GTATTATTTATGGTCGGTGCGTGCGATGCAAGTACACTTATGACCTGAAA AGTAATCAATACACGTTGGAAGGAAATGCCGAGCTGCAGGATGGGACATG GGGCTTCCGCGACATTAAAAGCAAGTCCGTGAAATTCATACAGACAGGGA CCTTGAACGGTGTGAACGCCGTCACGACTATTGTGGGCTCGGCATGGTAT TAAGAATATTGGGTGCACAAAGAGAGGTCTGGAGAAGAAGGACATATTCA TAGTGTTG back to topprotein sequence of NO16G02990.5 >NO16G02990.5-protein ID=NO16G02990.5-protein|Name=NO16G02990.5|organism=Nannochloropsis oceanica|type=polypeptide|length=560bp MAQYGFGRWNFPDAGANQMLSECADCNSTTGHNDFRFMNDVGNVVDGKEG AIAFIEYAAAQAQGQGKPFFMVLSLINPHDVLFQPQQFAASGYNETFLDG EIDLPMSVNESLSTKPTSQLQYRNIGIGAGITPSGYEEQLGYINFYGNLQ KLVDSYVVQTLDKLTETGLLEDTLIVNMADHGEMGLSHGGQIQKDFNFYE ETLRIPLTFSNPKLFPTPLESEQLVSLVDLLPTLATLLDAPKSAYPSRKK KWSGVDFSSVVLNPRKTKKVQDYTIFTFDDYTSGQPTVLANGTVGAWPQE PAHLSMRISVFRVFLSLSDLCPRTLALFHTNTHTNSLHCLCHNRILLVGI REKRWKIAMYYDPAEAVTKTPRQWELYDRLTDPEELNNLAYSNAIRTKAQ ERQYRRLQKKLKRVIQKRLGPVPLERSIEMIVTTNSSAIPNKKETLSQEG PASGVPIGQGTLFTTVRLRRCEGLDIRTCDSAYIKFTVSSRSGIIYGRCV RCKYTYDLKSNQYTLEGNAELQDGTWGFRDIKSKSVKFIQTGTLNGVNAV TTIVGSAWY* back to topmRNA from alignment at chr16:874582..878296+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G02990.5 ID=NO16G02990.5|Name=NO16G02990.5|organism=Nannochloropsis oceanica|type=mRNA|length=3715bp|location=Sequence derived from alignment at chr16:874582..878296+ (Nannochloropsis oceanica) CGAGACTTTAACTGAACCACCACTTGATCACACTCCAGCACCTATGGTAT
CCTTACACACCGCATACGCTACATGCCGTATCACATTGGCCTGCTTCAGC
ATGGATGATAGGCTATATGAGACCTTGTCAAAGTACAGGCAAGCCAGTTC
CTTTTGTGAAGCTTTCTACATATGGGATGACGTTATGAGGGCGGCTGTCA
AGTGCCTGTGTGAGGAGTTAATTCCCAGACGTGTTATGGGGCGACTATAT
GTACTTGTCTACATCATATTCTATAACGCTGTTCGATTATGAATGAACTC
CCGAACATCCTGCGAAGGGATATCAATCAGTCCTCTCGAAAATAGATACC
ACGGTTACGACAAGGCCATGGCATGGCCTGCTCACCATTACCATCGGAAG
GCGTGTAACATTGATACGCCGACGCCAAACCAAGCCCTAAGCTTGCAATA
GTAGCATTCCCCCAAACCGGCCCTCATTGCGAGGCCGGGTCACATAAACT
CCACACCATGTCCATGAGTAATATTATCGCAGCAACTGTGCGGTATATTT
TCCGGAGGCAATTTCCAACTCTGATCCCTGTGTCTATCCTATCCTACAGG
GAGATTTATTGGAAGGAAGCATACAATGACGTCGTCTTCGTTCCTCATTC
GCGTGCTGGGCACTGGTGCTTTCTTTCTCTTGGGCGTCCTTTCCGGAAAG
ACGGACGCCAAGAAGGGGCCCGATCCCAAATTACAAATTGACGATTTCAG
AGGGAAAAATGTCATCATTCTTATCATTGATCAGATGCGTCAAATTCAAG
ATTTTCCACCCGGCTGGAGCGAGGCGAATTTGCCTGGCCTCACCCGACTG
CAGCAAAACGGCTTAACGTTTACCCAAGCCACGTGTAACGCAGCAATGTG
CAGTCCATCGCGTGCGACGCTATTTACAGGAAGATTTCCGGCACAGCATG
GAGTACGATGGGTGCTGGAAGAGGGAATGCCGGAAACGAAGTACCCGCAA
CGCAATATGCCCCTTCCCGATCAGCTCGATAATATGGCGACCATGGCAAT
AGAGGCCGGTTACGAAGGTGGGGGGTTAGAGACGTTTCTTTCACTTTCTG
TTATCTTTCCTCCCTTCCTGATTTTCTGACAAACACTAACTTATTTTCCC
GTCCTTTGTTCCTATTTGTTCATCATTTCCTGCACTACCGTTCCTTTTTC
AGCCGTCTTCAAAGGGAAGTTCCATTGTGTCAAGAAGAGCACTGGTTCTA
ATGGGACATGGATTGGCTACGACATGGCGCAATACGGTTTCGGAAGATGG
AATTTTCCGGACGCTGGGGCAAATCAAATGCTATCCGAGTGCGCAGACTG
TAATTCTACGACTGGCCATAACGACTTTCGATTTATGGTATGTTTTGTGC
GGGAGAAGTACGGAGGTCGATAGGATGCGGGTTATGTATGCCTTTATGAG
TCTCTCCCTCAAAAAAGATCGAAGGCAAGTTTTGCCATAAGCCAAATGTG
CGCCTATAGGTCAAATTCACATCATTCCTTAACTCACACTGTGATCAGAA
CGACGTGGGAAATGTGGTTGATGGAAAGGAGGGCGCAATTGCATTCATCG
AGTACGCCGCTGCGCAAGCCCAAGGCCAAGGAAAGCCTTTTTTCATGGTT
TTATCCTTGATAAACCCTCACGACGTCCTCTTCCAGCCCCAACAATTCGC
CGCGTCAGGCTATAACGAGACATTTTTAGATGGAGAAATCGACCTCCCGA
TGTCAGTTAATGAAAGCTTATCAACCAAGCCCACGTCTCAGTTGCAGTAC
CGAAACATTGGTATCGGGGCAGGCATCACACCCAGCGGATATGAGGAGCA
GCTGGGCTACATGTAAGAATAGAGAGGCAGGAAAAGGGTCAACATATTTG
TATTTCCTGATTTAGTAGGTGGTGCCTCCTGTGGTCTCAGTGATTATAAT
CCCCGTGTTTGCGCTTTGTTATATGCTGACATATTCTTTTTCAAGTTTAT
TGTTTGTCTGTATACATGAAACAAGAATTGTTGTAAATCTAAATATTTCT
TCTCCCTTTTGACCTCCAGCAACTTTTACGGCAACCTTCAAAAGCTAGTT
GACTCGTATGTGGTCCAAACTCTTGACAAGCTGACCGAGACGGGCCTCCT
GGAGGACACTCTGATAGTCAATATGGCCGACCACGGGGAAATGGGCCTGT
CACACGGGTAAGGAGATTTATAAGGGAAAGTGGATCTTGGCAACGGAGGA
AGGCAAGAGCCAAAGGAAGATGCTGCGAAGATGCCTGATGGTCTTCTCAC
AAGTAGAAACGTCCCTAATATCACATTCCAAAATACACATAACAACCACA
GGGGTCAGATTCAAAAAGATTTCAATTTCTACGAGGAAACTTTGAGAATT
CCTTTGACTTTTTCGAATCCCAAGCTCTTTCCGACGCCTTTGGAAAGTGA
GCAGCTTGTTTCACTCGTGGATCTACTCCCCACGTTGGCCACCCTTTTAG
ACGCGCCCAAGAGTGCCTACCCTTCGCGTAAGAAAAAATGGTCGGGGGTA
GATTTCTCGTCGGTGGTTCTCAACCCTCGCAAGACCAAAAAAGTGCAGGA
CTATACGATTTTTACTTTTGATGACTACACGAGCGGGCAACCTACTGTTT
TGGCGAACGGCACAGTCGGAGCTTGGCCTCAGGAGCCCGCCCATCTAAGT
ATGAGAATTTCTGTCTTCCGCGTCTTCCTTTCCCTTTCTGACCTCTGTCC
ACGCACCCTAGCTCTCTTTCATACAAATACACACACTAACTCACTACACT
GCCTCTGCCATAACCGCATCCTCCTAGTCGGCATTCGCGAGAAGCGCTGG
AAAATAGCCATGTATTATGATCCTGCTGAAGCCGTCACAAAAACGCCGCG
ACAGTGGGAGCTCTATGATCGCTTAACGGACCCCGAAGGTATGTCGAACG
AGGACTAAGTGGAAAGAGATCATTAAGAGAAAAAGGTTTGAACAACCTCC
GAATACAAGGATTTGAAATTGTCTCAAATAATGTCGCGTCGGATTACGAA
ATTGTTGATAATCTAGTTCGCTGTATTGACTCCCAAGTAATACTTATGGC
ACTGAAACCCTTAATTCTTTGCATAACCTATAGAGCTAAATAATTTGGCC
TACAGCAATGCCATCCGCACCAAGGCGCAAGAGCGGCAATACAGGCGATT
GCAAAAGAAATTAAAGCGCGTCATTCAGAAGCGCCTGGGGCCCGTGCCCC
TTGAACGCTCCATTGAAATGATCGTCACGACCAATTCTTCTGCCATTCCT
AACAAGAAAGAAACCTTGTCTCAAGAAGGCCCAGCCAGTGGCGTGCCCAT
AGGTCAAGGGACACTTTTTACAACTGTGAGATTGCGGAGATGTGAGGGGT
TGGATATCCGTACGTGCGACTCGGCCTACATCAAATTTACTGTGTCCAGC
CGCAGCGGTATTATTTATGGTCGGTGCGTGCGATGCAAGTACACTTATGA
CCTGAAAAGTAATCAATACACGTTGGAAGGAAATGCCGAGCTGCAGGATG
GGACATGGGGCTTCCGCGACATTAAAAGCAAGTCCGTGAAATTCATACAG
ACAGGGACCTTGAACGGTGTGAACGCCGTCACGACTATTGTGGGCTCGGC
ATGGTATTAAGAATATTGGGTGCACAAAGAGAGGTCTGGAGAAGAAGGAC
ATATTCATAGTGTTG back to topCoding sequence (CDS) from alignment at chr16:874582..878296+ >NO16G02990.5 ID=NO16G02990.5|Name=NO16G02990.5|organism=Nannochloropsis oceanica|type=CDS|length=1680bp|location=Sequence derived from alignment at chr16:874582..878296+ (Nannochloropsis oceanica) ATGGCGCAATACGGTTTCGGAAGATGGAATTTTCCGGACGCTGGGGCAAA TCAAATGCTATCCGAGTGCGCAGACTGTAATTCTACGACTGGCCATAACG ACTTTCGATTTATGAACGACGTGGGAAATGTGGTTGATGGAAAGGAGGGC GCAATTGCATTCATCGAGTACGCCGCTGCGCAAGCCCAAGGCCAAGGAAA GCCTTTTTTCATGGTTTTATCCTTGATAAACCCTCACGACGTCCTCTTCC AGCCCCAACAATTCGCCGCGTCAGGCTATAACGAGACATTTTTAGATGGA GAAATCGACCTCCCGATGTCAGTTAATGAAAGCTTATCAACCAAGCCCAC GTCTCAGTTGCAGTACCGAAACATTGGTATCGGGGCAGGCATCACACCCA GCGGATATGAGGAGCAGCTGGGCTACATCAACTTTTACGGCAACCTTCAA AAGCTAGTTGACTCGTATGTGGTCCAAACTCTTGACAAGCTGACCGAGAC GGGCCTCCTGGAGGACACTCTGATAGTCAATATGGCCGACCACGGGGAAA TGGGCCTGTCACACGGGGGTCAGATTCAAAAAGATTTCAATTTCTACGAG GAAACTTTGAGAATTCCTTTGACTTTTTCGAATCCCAAGCTCTTTCCGAC GCCTTTGGAAAGTGAGCAGCTTGTTTCACTCGTGGATCTACTCCCCACGT TGGCCACCCTTTTAGACGCGCCCAAGAGTGCCTACCCTTCGCGTAAGAAA AAATGGTCGGGGGTAGATTTCTCGTCGGTGGTTCTCAACCCTCGCAAGAC CAAAAAAGTGCAGGACTATACGATTTTTACTTTTGATGACTACACGAGCG GGCAACCTACTGTTTTGGCGAACGGCACAGTCGGAGCTTGGCCTCAGGAG CCCGCCCATCTAAGTATGAGAATTTCTGTCTTCCGCGTCTTCCTTTCCCT TTCTGACCTCTGTCCACGCACCCTAGCTCTCTTTCATACAAATACACACA CTAACTCACTACACTGCCTCTGCCATAACCGCATCCTCCTAGTCGGCATT CGCGAGAAGCGCTGGAAAATAGCCATGTATTATGATCCTGCTGAAGCCGT CACAAAAACGCCGCGACAGTGGGAGCTCTATGATCGCTTAACGGACCCCG AAGAGCTAAATAATTTGGCCTACAGCAATGCCATCCGCACCAAGGCGCAA GAGCGGCAATACAGGCGATTGCAAAAGAAATTAAAGCGCGTCATTCAGAA GCGCCTGGGGCCCGTGCCCCTTGAACGCTCCATTGAAATGATCGTCACGA CCAATTCTTCTGCCATTCCTAACAAGAAAGAAACCTTGTCTCAAGAAGGC CCAGCCAGTGGCGTGCCCATAGGTCAAGGGACACTTTTTACAACTGTGAG ATTGCGGAGATGTGAGGGGTTGGATATCCGTACGTGCGACTCGGCCTACA TCAAATTTACTGTGTCCAGCCGCAGCGGTATTATTTATGGTCGGTGCGTG CGATGCAAGTACACTTATGACCTGAAAAGTAATCAATACACGTTGGAAGG AAATGCCGAGCTGCAGGATGGGACATGGGGCTTCCGCGACATTAAAAGCA AGTCCGTGAAATTCATACAGACAGGGACCTTGAACGGTGTGAACGCCGTC ACGACTATTGTGGGCTCGGCATGGTATTAA back to top
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