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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr16 | genome | chr16:874582..878296 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G02990.4 vs.
Match: WP_012936588.1 (DUF4976 domain-containing protein [Conexibacter woesei]; ADB53537.1 sulfatase [Conexibacter woesei DSM 14684]) HSP 1 Score: 437.2 bits (1123), Expect = 7.800e-119 Identity = 225/433 (51.96%), Postives = 291/433 (67.21%), Query Frame = 0
Query: 43 GKNVIILIIDQMRQIQDFPPGWSEANLPGLTRLQQNGLTFTQATCNAAMCSPSRATLFTGRFPAQHGVRWVLEEGMPETKYPQRNMPLPDQLDNMATMAIEAGYEAVFKGKFHCVKKSTGSNGTWIGYDMAQYGFGRWNFPDAGANQMLSECADCNSTTGHNDFRFMNDVGNVVDGKEGAIAFIEYAAAQAQGQGKPFFMVLSLINPHDVLFQPQQFAASGYNETFLDGEIDLPMSVNESLSTKPTSQLQYRNIGIGAGITPSGYEEQLGYINFYGNLQKLVDSYVVQTLDKLTETGLLEDTLIVNMADHGEMGLSHGGQIQKDFNFYEETLRIPLTFSNPKLFPTPLESEQLVSLVDLLPTLATLLDAPKSAYPSRKKKWSGVDFSSVVLNPRKTKKVQDYTIFTFDDYTSGQPTVLANGTVGAWPQEPAHL 476
G NV++ + DQ R IQ FPPGWS+ N+PGLTRLQ++GLTF A NA MCSP+R+TL TG FPAQHGV++ LE MP +YPQ + L N AT+ AGY V+KGKFHCVK + GS TW+ D+ QYGF RW+ PDAGANQ + E T ND RFMN G G EGA+ ++ AAQ+Q PFFMV+SL+NPHDVLF P+ + + GY++++L GEI+ P + NE LSTKP Q Q++ + G P+ + + Y+NFYGNL K D+Y+V+ LD L TGLL+DTL++ ADHGEMG +HGG QK+FNFYEE+ R+PL +SNP+LF P S+ LVS VD LPTLA+L+ AP SA + W GVD+SS +L+ R K QDYT+FT+DD+ SGQ G +PQ P H+
Sbjct: 59 GMNVLLFLTDQQRAIQHFPPGWSQRNMPGLTRLQRHGLTFANAFTNACMCSPARSTLMTGYFPAQHGVKYTLETDMPSPQYPQ--VELATTFKNPATVVAAAGYTPVYKGKFHCVKPANGS--TWVPSDVNQYGFTRWDPPDAGANQDIPEEG---GGTYDNDGRFMNSQGTPEAGTEGALQYLSSVAAQSQ----PFFMVVSLVNPHDVLFYPKTYESGGYDDSWLRGEIEPPATANEDLSTKPAVQRQFQRLFSATGPLPTP-QMKRNYLNFYGNLMKASDAYLVKLLDTLKSTGLLDDTLVIATADHGEMGTAHGGLRQKNFNFYEESTRVPLVYSNPRLFRRPERSDALVSHVDFLPTLASLVGAPASA----RANWEGVDYSSQILD-RSPKPTQDYTVFTYDDWQSGQAR-------GPYPQPPNHI 467
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G02990.4 ID=NO16G02990.4|Name=NO16G02990.4|organism=Nannochloropsis oceanica|type=mRNA|length=3068bp CGAGACTTTAACTGAACCACCACTTGATCACACTCCAGCACCTATGGTAT CCTTACACACCGCATACGCTACATGCCGTATCACATTGGCCTGCTTCAGC ATGGATGATAGGCTATATGAGACCTTGTCAAAGTACAGGCAAGCCAGTTC CTTTTGTGAAGCTTTCTACATATGGGATGACGTTATGAGGGCGGCTGTCA AGTGCCTGTGTGAGGAGTTAATTCCCAGACGTGTTATGGGGCGACTATAT GTACTTGTCTACATCATATTCTATAACGCTGTTCGATTATGAATGAACTC CCGAACATCCTGCGAAGGGATATCAATCAGTCCTCTCGAAAATAGATACC ACGGTTACGACAAGGCCATGGCATGGCCTGCTCACCATTACCATCGGAAG GCGTGTAACATTGATACGCCGACGCCAAACCAAGCCCTAAGCTTGCAATA GTAGCATTCCCCCAAACCGGCCCTCATTGCGAGGCCGGGTCACATAAACT CCACACCATGTCCATGAGTAATATTATCGCAGCAACTGTGCGGTATATTT TCCGGAGGCAATTTCCAACTCTGATCCCTGTGTCTATCCTATCCTACAGG GAGATTTATTGGAAGGAAGCATACAATGACGTCGTCTTCGTTCCTCATTC GCGTGCTGGGCACTGGTGCTTTCTTTCTCTTGGGCGTCCTTTCCGGAAAG ACGGACGCCAAGAAGGGGCCCGATCCCAAATTACAAATTGACGATTTCAG AGGGAAAAATGTCATCATTCTTATCATTGATCAGATGCGTCAAATTCAAG ATTTTCCACCCGGCTGGAGCGAGGCGAATTTGCCTGGCCTCACCCGACTG CAGCAAAACGGCTTAACGTTTACCCAAGCCACGTGTAACGCAGCAATGTG CAGTCCATCGCGTGCGACGCTATTTACAGGAAGATTTCCGGCACAGCATG GAGTACGATGGGTGCTGGAAGAGGGAATGCCGGAAACGAAGTACCCGCAA CGCAATATGCCCCTTCCCGATCAGCTCGATAATATGGCGACCATGGCAAT AGAGGCCGGTTACGAAGCCGTCTTCAAAGGGAAGTTCCATTGTGTCAAGA AGAGCACTGGTTCTAATGGGACATGGATTGGCTACGACATGGCGCAATAC GGTTTCGGAAGATGGAATTTTCCGGACGCTGGGGCAAATCAAATGCTATC CGAGTGCGCAGACTGTAATTCTACGACTGGCCATAACGACTTTCGATTTA TGAACGACGTGGGAAATGTGGTTGATGGAAAGGAGGGCGCAATTGCATTC ATCGAGTACGCCGCTGCGCAAGCCCAAGGCCAAGGAAAGCCTTTTTTCAT GGTTTTATCCTTGATAAACCCTCACGACGTCCTCTTCCAGCCCCAACAAT TCGCCGCGTCAGGCTATAACGAGACATTTTTAGATGGAGAAATCGACCTC CCGATGTCAGTTAATGAAAGCTTATCAACCAAGCCCACGTCTCAGTTGCA GTACCGAAACATTGGTATCGGGGCAGGCATCACACCCAGCGGATATGAGG AGCAGCTGGGCTACATCAACTTTTACGGCAACCTTCAAAAGCTAGTTGAC TCGTATGTGGTCCAAACTCTTGACAAGCTGACCGAGACGGGCCTCCTGGA GGACACTCTGATAGTCAATATGGCCGACCACGGGGAAATGGGCCTGTCAC ACGGGGGTCAGATTCAAAAAGATTTCAATTTCTACGAGGAAACTTTGAGA ATTCCTTTGACTTTTTCGAATCCCAAGCTCTTTCCGACGCCTTTGGAAAG TGAGCAGCTTGTTTCACTCGTGGATCTACTCCCCACGTTGGCCACCCTTT TAGACGCGCCCAAGAGTGCCTACCCTTCGCGTAAGAAAAAATGGTCGGGG GTAGATTTCTCGTCGGTGGTTCTCAACCCTCGCAAGACCAAAAAAGTGCA GGACTATACGATTTTTACTTTTGATGACTACACGAGCGGGCAACCTACTG TTTTGGCGAACGGCACAGTCGGAGCTTGGCCTCAGGAGCCCGCCCATCTA AGTATGAGAATTTCTGTCTTCCGCGTCTTCCTTTCCCTTTCTGACCTCTG TCCACGCACCCTAGCTCTCTTTCATACAAATACACACACTAACTCACTAC ACTGCCTCTGCCATAACCGCATCCTCCTAGTCGGCATTCGCGAGAAGCGC TGGAAAATAGCCATGTATTATGATCCTGCTGAAGCCGTCACAAAAACGCC GCGACAGTGGGAGCTCTATGATCGCTTAACGGACCCCGAAGGTATGTCGA ACGAGGACTAAGTGGAAAGAGATCATTAAGAGAAAAAGGTTTGAACAACC TCCGAATACAAGGATTTGAAATTGTCTCAAATAATGTCGCGTCGGATTAC GAAATTGTTGATAATCTAGTTCGCTGTATTGACTCCCAAGTAATACTTAT GGCACTGAAACCCTTAATTCTTTGCATAACCTATAGAGCTAAATAATTTG GCCTACAGCAATGCCATCCGCACCAAGGCGCAAGAGCGGCAATACAGGCG ATTGCAAAAGAAATTAAAGCGCGTCATTCAGAAGCGCCTGGGGCCCGTGC CCCTTGAACGCTCCATTGAAATGATCGTCACGACCAATTCTTCTGCCATT CCTAACAAGAAAGAAACCTTGTCTCAAGAAGGCCCAGCCAGTGGCGTGCC CATAGGTCAAGGGACACTTTTTACAACTGTGAGATTGCGGAGATGTGAGG GGTTGGATATCCGTACGTGCGACTCGGCCTACATCAAATTTACTGTGTCC AGCCGCAGCGGTATTATTTATGGTCGGTGCGTGCGATGCAAGTACACTTA TGACCTGAAAAGTAATCAATACACGTTGGAAGGAAATGCCGAGCTGCAGG ATGGGACATGGGGCTTCCGCGACATTAAAAGCAAGTCCGTGAAATTCATA CAGACAGGGACCTTGAACGGTGTGAACGCCGTCACGACTATTGTGGGCTC GGCATGGTATTAAGAATATTGGGTGCACAAAGAGAGGTCTGGAGAAGAAG GACATATTCATAGTGTTG back to topprotein sequence of NO16G02990.4 >NO16G02990.4-protein ID=NO16G02990.4-protein|Name=NO16G02990.4|organism=Nannochloropsis oceanica|type=polypeptide|length=562bp MTSSSFLIRVLGTGAFFLLGVLSGKTDAKKGPDPKLQIDDFRGKNVIILI IDQMRQIQDFPPGWSEANLPGLTRLQQNGLTFTQATCNAAMCSPSRATLF TGRFPAQHGVRWVLEEGMPETKYPQRNMPLPDQLDNMATMAIEAGYEAVF KGKFHCVKKSTGSNGTWIGYDMAQYGFGRWNFPDAGANQMLSECADCNST TGHNDFRFMNDVGNVVDGKEGAIAFIEYAAAQAQGQGKPFFMVLSLINPH DVLFQPQQFAASGYNETFLDGEIDLPMSVNESLSTKPTSQLQYRNIGIGA GITPSGYEEQLGYINFYGNLQKLVDSYVVQTLDKLTETGLLEDTLIVNMA DHGEMGLSHGGQIQKDFNFYEETLRIPLTFSNPKLFPTPLESEQLVSLVD LLPTLATLLDAPKSAYPSRKKKWSGVDFSSVVLNPRKTKKVQDYTIFTFD DYTSGQPTVLANGTVGAWPQEPAHLSMRISVFRVFLSLSDLCPRTLALFH TNTHTNSLHCLCHNRILLVGIREKRWKIAMYYDPAEAVTKTPRQWELYDR LTDPEGMSNED* back to topmRNA from alignment at chr16:874582..878296+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G02990.4 ID=NO16G02990.4|Name=NO16G02990.4|organism=Nannochloropsis oceanica|type=mRNA|length=3715bp|location=Sequence derived from alignment at chr16:874582..878296+ (Nannochloropsis oceanica) CGAGACTTTAACTGAACCACCACTTGATCACACTCCAGCACCTATGGTAT
CCTTACACACCGCATACGCTACATGCCGTATCACATTGGCCTGCTTCAGC
ATGGATGATAGGCTATATGAGACCTTGTCAAAGTACAGGCAAGCCAGTTC
CTTTTGTGAAGCTTTCTACATATGGGATGACGTTATGAGGGCGGCTGTCA
AGTGCCTGTGTGAGGAGTTAATTCCCAGACGTGTTATGGGGCGACTATAT
GTACTTGTCTACATCATATTCTATAACGCTGTTCGATTATGAATGAACTC
CCGAACATCCTGCGAAGGGATATCAATCAGTCCTCTCGAAAATAGATACC
ACGGTTACGACAAGGCCATGGCATGGCCTGCTCACCATTACCATCGGAAG
GCGTGTAACATTGATACGCCGACGCCAAACCAAGCCCTAAGCTTGCAATA
GTAGCATTCCCCCAAACCGGCCCTCATTGCGAGGCCGGGTCACATAAACT
CCACACCATGTCCATGAGTAATATTATCGCAGCAACTGTGCGGTATATTT
TCCGGAGGCAATTTCCAACTCTGATCCCTGTGTCTATCCTATCCTACAGG
GAGATTTATTGGAAGGAAGCATACAATGACGTCGTCTTCGTTCCTCATTC
GCGTGCTGGGCACTGGTGCTTTCTTTCTCTTGGGCGTCCTTTCCGGAAAG
ACGGACGCCAAGAAGGGGCCCGATCCCAAATTACAAATTGACGATTTCAG
AGGGAAAAATGTCATCATTCTTATCATTGATCAGATGCGTCAAATTCAAG
ATTTTCCACCCGGCTGGAGCGAGGCGAATTTGCCTGGCCTCACCCGACTG
CAGCAAAACGGCTTAACGTTTACCCAAGCCACGTGTAACGCAGCAATGTG
CAGTCCATCGCGTGCGACGCTATTTACAGGAAGATTTCCGGCACAGCATG
GAGTACGATGGGTGCTGGAAGAGGGAATGCCGGAAACGAAGTACCCGCAA
CGCAATATGCCCCTTCCCGATCAGCTCGATAATATGGCGACCATGGCAAT
AGAGGCCGGTTACGAAGGTGGGGGGTTAGAGACGTTTCTTTCACTTTCTG
TTATCTTTCCTCCCTTCCTGATTTTCTGACAAACACTAACTTATTTTCCC
GTCCTTTGTTCCTATTTGTTCATCATTTCCTGCACTACCGTTCCTTTTTC
AGCCGTCTTCAAAGGGAAGTTCCATTGTGTCAAGAAGAGCACTGGTTCTA
ATGGGACATGGATTGGCTACGACATGGCGCAATACGGTTTCGGAAGATGG
AATTTTCCGGACGCTGGGGCAAATCAAATGCTATCCGAGTGCGCAGACTG
TAATTCTACGACTGGCCATAACGACTTTCGATTTATGGTATGTTTTGTGC
GGGAGAAGTACGGAGGTCGATAGGATGCGGGTTATGTATGCCTTTATGAG
TCTCTCCCTCAAAAAAGATCGAAGGCAAGTTTTGCCATAAGCCAAATGTG
CGCCTATAGGTCAAATTCACATCATTCCTTAACTCACACTGTGATCAGAA
CGACGTGGGAAATGTGGTTGATGGAAAGGAGGGCGCAATTGCATTCATCG
AGTACGCCGCTGCGCAAGCCCAAGGCCAAGGAAAGCCTTTTTTCATGGTT
TTATCCTTGATAAACCCTCACGACGTCCTCTTCCAGCCCCAACAATTCGC
CGCGTCAGGCTATAACGAGACATTTTTAGATGGAGAAATCGACCTCCCGA
TGTCAGTTAATGAAAGCTTATCAACCAAGCCCACGTCTCAGTTGCAGTAC
CGAAACATTGGTATCGGGGCAGGCATCACACCCAGCGGATATGAGGAGCA
GCTGGGCTACATGTAAGAATAGAGAGGCAGGAAAAGGGTCAACATATTTG
TATTTCCTGATTTAGTAGGTGGTGCCTCCTGTGGTCTCAGTGATTATAAT
CCCCGTGTTTGCGCTTTGTTATATGCTGACATATTCTTTTTCAAGTTTAT
TGTTTGTCTGTATACATGAAACAAGAATTGTTGTAAATCTAAATATTTCT
TCTCCCTTTTGACCTCCAGCAACTTTTACGGCAACCTTCAAAAGCTAGTT
GACTCGTATGTGGTCCAAACTCTTGACAAGCTGACCGAGACGGGCCTCCT
GGAGGACACTCTGATAGTCAATATGGCCGACCACGGGGAAATGGGCCTGT
CACACGGGTAAGGAGATTTATAAGGGAAAGTGGATCTTGGCAACGGAGGA
AGGCAAGAGCCAAAGGAAGATGCTGCGAAGATGCCTGATGGTCTTCTCAC
AAGTAGAAACGTCCCTAATATCACATTCCAAAATACACATAACAACCACA
GGGGTCAGATTCAAAAAGATTTCAATTTCTACGAGGAAACTTTGAGAATT
CCTTTGACTTTTTCGAATCCCAAGCTCTTTCCGACGCCTTTGGAAAGTGA
GCAGCTTGTTTCACTCGTGGATCTACTCCCCACGTTGGCCACCCTTTTAG
ACGCGCCCAAGAGTGCCTACCCTTCGCGTAAGAAAAAATGGTCGGGGGTA
GATTTCTCGTCGGTGGTTCTCAACCCTCGCAAGACCAAAAAAGTGCAGGA
CTATACGATTTTTACTTTTGATGACTACACGAGCGGGCAACCTACTGTTT
TGGCGAACGGCACAGTCGGAGCTTGGCCTCAGGAGCCCGCCCATCTAAGT
ATGAGAATTTCTGTCTTCCGCGTCTTCCTTTCCCTTTCTGACCTCTGTCC
ACGCACCCTAGCTCTCTTTCATACAAATACACACACTAACTCACTACACT
GCCTCTGCCATAACCGCATCCTCCTAGTCGGCATTCGCGAGAAGCGCTGG
AAAATAGCCATGTATTATGATCCTGCTGAAGCCGTCACAAAAACGCCGCG
ACAGTGGGAGCTCTATGATCGCTTAACGGACCCCGAAGGTATGTCGAACG
AGGACTAAGTGGAAAGAGATCATTAAGAGAAAAAGGTTTGAACAACCTCC
GAATACAAGGATTTGAAATTGTCTCAAATAATGTCGCGTCGGATTACGAA
ATTGTTGATAATCTAGTTCGCTGTATTGACTCCCAAGTAATACTTATGGC
ACTGAAACCCTTAATTCTTTGCATAACCTATAGAGCTAAATAATTTGGCC
TACAGCAATGCCATCCGCACCAAGGCGCAAGAGCGGCAATACAGGCGATT
GCAAAAGAAATTAAAGCGCGTCATTCAGAAGCGCCTGGGGCCCGTGCCCC
TTGAACGCTCCATTGAAATGATCGTCACGACCAATTCTTCTGCCATTCCT
AACAAGAAAGAAACCTTGTCTCAAGAAGGCCCAGCCAGTGGCGTGCCCAT
AGGTCAAGGGACACTTTTTACAACTGTGAGATTGCGGAGATGTGAGGGGT
TGGATATCCGTACGTGCGACTCGGCCTACATCAAATTTACTGTGTCCAGC
CGCAGCGGTATTATTTATGGTCGGTGCGTGCGATGCAAGTACACTTATGA
CCTGAAAAGTAATCAATACACGTTGGAAGGAAATGCCGAGCTGCAGGATG
GGACATGGGGCTTCCGCGACATTAAAAGCAAGTCCGTGAAATTCATACAG
ACAGGGACCTTGAACGGTGTGAACGCCGTCACGACTATTGTGGGCTCGGC
ATGGTATTAAGAATATTGGGTGCACAAAGAGAGGTCTGGAGAAGAAGGAC
ATATTCATAGTGTTG back to topCoding sequence (CDS) from alignment at chr16:874582..878296+ >NO16G02990.4 ID=NO16G02990.4|Name=NO16G02990.4|organism=Nannochloropsis oceanica|type=CDS|length=1686bp|location=Sequence derived from alignment at chr16:874582..878296+ (Nannochloropsis oceanica) ATGACGTCGTCTTCGTTCCTCATTCGCGTGCTGGGCACTGGTGCTTTCTT TCTCTTGGGCGTCCTTTCCGGAAAGACGGACGCCAAGAAGGGGCCCGATC CCAAATTACAAATTGACGATTTCAGAGGGAAAAATGTCATCATTCTTATC ATTGATCAGATGCGTCAAATTCAAGATTTTCCACCCGGCTGGAGCGAGGC GAATTTGCCTGGCCTCACCCGACTGCAGCAAAACGGCTTAACGTTTACCC AAGCCACGTGTAACGCAGCAATGTGCAGTCCATCGCGTGCGACGCTATTT ACAGGAAGATTTCCGGCACAGCATGGAGTACGATGGGTGCTGGAAGAGGG AATGCCGGAAACGAAGTACCCGCAACGCAATATGCCCCTTCCCGATCAGC TCGATAATATGGCGACCATGGCAATAGAGGCCGGTTACGAAGCCGTCTTC AAAGGGAAGTTCCATTGTGTCAAGAAGAGCACTGGTTCTAATGGGACATG GATTGGCTACGACATGGCGCAATACGGTTTCGGAAGATGGAATTTTCCGG ACGCTGGGGCAAATCAAATGCTATCCGAGTGCGCAGACTGTAATTCTACG ACTGGCCATAACGACTTTCGATTTATGAACGACGTGGGAAATGTGGTTGA TGGAAAGGAGGGCGCAATTGCATTCATCGAGTACGCCGCTGCGCAAGCCC AAGGCCAAGGAAAGCCTTTTTTCATGGTTTTATCCTTGATAAACCCTCAC GACGTCCTCTTCCAGCCCCAACAATTCGCCGCGTCAGGCTATAACGAGAC ATTTTTAGATGGAGAAATCGACCTCCCGATGTCAGTTAATGAAAGCTTAT CAACCAAGCCCACGTCTCAGTTGCAGTACCGAAACATTGGTATCGGGGCA GGCATCACACCCAGCGGATATGAGGAGCAGCTGGGCTACATCAACTTTTA CGGCAACCTTCAAAAGCTAGTTGACTCGTATGTGGTCCAAACTCTTGACA AGCTGACCGAGACGGGCCTCCTGGAGGACACTCTGATAGTCAATATGGCC GACCACGGGGAAATGGGCCTGTCACACGGGGGTCAGATTCAAAAAGATTT CAATTTCTACGAGGAAACTTTGAGAATTCCTTTGACTTTTTCGAATCCCA AGCTCTTTCCGACGCCTTTGGAAAGTGAGCAGCTTGTTTCACTCGTGGAT CTACTCCCCACGTTGGCCACCCTTTTAGACGCGCCCAAGAGTGCCTACCC TTCGCGTAAGAAAAAATGGTCGGGGGTAGATTTCTCGTCGGTGGTTCTCA ACCCTCGCAAGACCAAAAAAGTGCAGGACTATACGATTTTTACTTTTGAT GACTACACGAGCGGGCAACCTACTGTTTTGGCGAACGGCACAGTCGGAGC TTGGCCTCAGGAGCCCGCCCATCTAAGTATGAGAATTTCTGTCTTCCGCG TCTTCCTTTCCCTTTCTGACCTCTGTCCACGCACCCTAGCTCTCTTTCAT ACAAATACACACACTAACTCACTACACTGCCTCTGCCATAACCGCATCCT CCTAGTCGGCATTCGCGAGAAGCGCTGGAAAATAGCCATGTATTATGATC CTGCTGAAGCCGTCACAAAAACGCCGCGACAGTGGGAGCTCTATGATCGC TTAACGGACCCCGAAGGTATGTCGAACGAGGACTAA back to top
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