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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr16 | genome | chr16:187952..193231 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO16G00540.1 vs.
Match: EWM24057.1 (dead-box atp-dependent rna helicase 42-like protein [Nannochloropsis gaditana]) HSP 1 Score: 1213.0 bits (3137), Expect = 0.000e+0 Identity = 704/961 (73.26%), Postives = 769/961 (80.02%), Query Frame = 0
Query: 518 GTGDGIGGGRTGGRAGGRRGKANGGYDPLGSNTITMEELFGGGR-----------GVGRGEKKETGEEEEEEDEEKLEADRQAFLAAIRGEPAPTASTTTPAAAT-AAPTPAAAATPALPPSSTSTTTMPLPPPPTSSATRLGRLFQSDGDLEDEDEDALSRAAQQKTSLEILQEQVKKKELKPVDHSQVAYLPIRKKLYIIPRALHGLTDTELASRRDLLEIKVRGKGCPAPLETWEQSGLPERVLGLLKKWKLLEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPLLRHILDQEGTYPLGEGEGPIGLIMAPARELAVQIHLEAKKFCRPLGLRCVAVYGGAGIGDQIGELKRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMDEADRMFDMGFEPQIKMILTNVRPDRQTVLFSATFPKQVETLARKVLAFPLEILVGGRSVASDAITQYVEVREEGEEKFMRLLQLLGVWYEKGNVLIFVDTQAKCDNLFADLMKSGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSVAGRGLDVPELCCVINFSCPNHLEDYVHRVGRTGRAGRKGTAYTFITPEEDQYAPLLYKALTQSKQEVPPELRRMAEAFQEKVSQGQAQWAGSGFGGKGFTFDESEQTDAQRTAALQKRQYQIEQG--------------DEEEQEEEEDQRKKQASAAAAAAGAAAAAGIGG-----GGAGASVLPSLAGGGGG---GISAALERAKALAEKLKQGGPSVTVVPSAAATAVTPSASSPPS-----ASPSSTSDALARARAVAGKLAAAVPSFSSAAATAGAAGGGSSGSSSITAADAVKAALAIAGGKLMSKKE-TEHFFEELDVNDYPQQARWKATQKESVSQVQERTECSVITRGRYVAPGQEHTLEAGERKLYLLIEGKTELAVRQARREFQRILDEETLRVGARPQFGRFHV 1439
G G G GR GG+ GR+G+ +G YDPLGSNTIT ELFG G G E E G E+EEDEE+LEADRQAFLAA+RGE ++T P+ P A A P P +RLGRLFQSDGDLE+EDE+ KT+LEILQEQVKKKELKPVDH++V YLPIRKKLYI+PRALHG +D EL RR+ LEIKVRGKGCPAPLETWEQSGLP+RVLGLL+K+KL EPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLP+LRHILDQE ++PLGEGEGPIG++MAPARELAVQIH EAKKFCRPLGLRCVAVYGGAGIGDQIGELKRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMDEADRMFDMGFEPQIKMILTN+RPDRQTVLFSATFPKQVE+LARKVLAFPLEILVGGRSVASDAITQYVEVREEGEEK+MRLLQLLGVWYEKGNVLIFVDTQ KCDNLFADLM+SGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSVAGRGLDVPELCCVIN++CPNHLEDYVHRVGRTGRAGRKGTAYTF+T EE+QYAPLL KALTQSKQEVPPELR MAEAFQ+KV+ G A WAGSGFGGKGFTF++SEQTDAQRTAALQK+QYQIEQG +EE E EE++RK+ + AAA + G S P + G G GI AA+ERAKALAE+LKQGG SA + TPS SPP A P STSDALARARA+A K AA PS ++AAA GA S++TAADA+KAALAIAGG K E EHFFEEL++N+YPQQARWKATQK++VSQ+QERTECSVITRGRYVAPGQEHTLE GERKLYLLIEG+TELAVRQARREFQRILDEETLRVG+RPQFGR+ V
Sbjct: 3 GWEGGQGKGRGGGK--GRKGRLDG-YDPLGSNTITAAELFGKKSVEKAAWESDTDGDGEEEDGEEGMMEDEEDEEQLEADRQAFLAALRGE----STTQKPSVGDPVGSVPPKAGLDAEGPEGGKGGEGG-EGPSKEPRSRLGRLFQSDGDLEEEDEEGPREGP--KTALEILQEQVKKKELKPVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYGGAGIGDQIGELKRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMDEADRMFDMGFEPQIKMILTNIRPDRQTVLFSATFPKQVESLARKVLAFPLEILVGGRSVASDAITQYVEVREEGEEKYMRLLQLLGVWYEKGNVLIFVDTQQKCDNLFADLMRSGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSVAGRGLDVPELCCVINYACPNHLEDYVHRVGRTGRAGRKGTAYTFLTSEEEQYAPLLLKALTQSKQEVPPELRAMAEAFQQKVTAGTAHWAGSGFGGKGFTFEDSEQTDAQRTAALQKKQYQIEQGLVAEEGGAGGGGDSSDEEAELEEEKRKRATTPTTEGTAGGAAAVVEGVAPKIPSQAVSGSPGVGEGESGVSTGILAAVERAKALAERLKQGGTGA----SANVPSTTPSLPSPPGGTGAPAPPPSTSDALARARALAEKFGAA-PSTAAAAAGLGA-------GSTVTAADALKAALAIAGGVSAEKVEKKEHFFEELEINEYPQQARWKATQKDNVSQIQERTECSVITRGRYVAPGQEHTLEPGERKLYLLIEGRTELAVRQARREFQRILDEETLRVGSRPQFGRYSV 941
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO16G00540.1 ID=NO16G00540.1|Name=NO16G00540.1|organism=Nannochloropsis oceanica|type=mRNA|length=4449bp
ATGACGGACGACAAGCCCAGCGGCAGCAGCAAGAGCAACAAGAGCGGAAA
GAACAGCAGCAGCCGGAAGCGAGAGCGAGATAGCTCCCTTCCGCGGGGCA
GCAGCGGGCGCAGCAGCAGTGGCAGCATCCACCACCACCATCACCGTAAT
GATCGCAGCGACCGCAGCGACCGCAATAGTGAGAAGGAAAAGAAGCAGAA
GCGCGAAAAACGGCGAGGAGAGACGAGTCGGAGTCCTTCCCCCTCCAATA
TTTCCTCCGCCGCTGCGTCCTCCTCCCGCCACACCGACCCATCCACCTCC
TCGTCCTCCTCCCGTCACCACCACCACAGGGATCGGGACCGAGACCGAGA
AAAAGAGTCTGAGAGTCAACATAGGCGGAGGGGGAGTGGGGGAGGAGGGG
GAGGTGGAGAGGGAGGAAGCAGCAGCCGCAGACGAAGCAGGAGCAGGAGC
AACGACAGGAGCAGGAGCCGGTCGCGGTCGCGGGAACGGAAGGAGAAGAG
GAGTAGGCTGGAGAAGAAGAAAGAGAGGCCTGATAGGGAGAGGGAAAGGG
AGAAGGGGAGAGACAGGGATGGAGGCAGGGAAGGAGAGAGGGGGGAGAGA
AAGCGGGAGCACCGTCGGGGAGGGAATGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAACAGGAGGAGGAGGAACAGGAGGGGAGGCCGAGAAGGAGGAAA
AGGCCAGGGCCGCCTCTACTGCAAGCGCTGCTGCCCTCTCCGTGATTGCT
CGACTCAACCAAAAGATGCAACAGAAGCCGGCCGCTATTGTCGTTCCTTC
TTCCCTCCCTTCCGCGCCTCCTGCTGCTCCGGGGCAAGCATCCGCCGCGC
TCGCGCAATTTGTGGCTGCGCAGCAGCTTCTGAAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGAACCAAGCAGGGACAGCAGCAGCAGTAGCGGCAGCGAG
TACCCTTCTAGCCTCCTCCTCCCCTCCTTCTGCATCTGCAGCACCGCCGG
CGACGACGACCACGACGGAGGAAGCGGGGCAGGGAGGGCAGGGAGGGCAG
GAGGTGGAAGATGCTGAGGCAGTAGCGGAGAGAGAGATGCAGAAAAGGGC
GGAGCGTATTCGGCTTTTCCAGGAGGAACGTCGGCAGAAGGAAGCTGCTG
CTGCTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCCAGCACCACAGCTAGG
CTGGCGCAGGCCGCTCTGGCCCTGACTGGGAGTGTGGGTGGAAAGATAGG
AGGAGGGATAAAGGGAGTGAAAAAGTGGTCTTTGGAGGATGATGGAGAGG
AGGAGGAGGAGTTGGAGGGAGGGATGGTGCCATCGGAGAGGAGGAGTGGC
AGTAATGATACGCCTTCAAGTGTTTTATCGGTGGAGAAACATCTATCACT
CAATGGGATGGAGGAGGACGAGGAGGAGGAGGGGGATCCCCTCGATGCTT
TCATGTCTTCCCTGGAGAGAAATGTGGAGGGAGGGAGGGAGAGGCAGGAT
GGAGGGGAGGGGGGAGGGGTCCGGGCACAGGCAGAGATGTACGGGGCGTT
CGGCACGGGGGACGGCATAGGGGGAGGGAGGACGGGGGGGAGGGCTGGGG
GGAGGAGGGGGAAGGCGAATGGTGGATATGATCCTTTGGGGAGTAACACG
ATAACGATGGAGGAGCTCTTTGGTGGAGGAAGGGGGGTTGGAAGGGGGGA
GAAGAAAGAGACAGGAGAGGAGGAAGAGGAGGAGGACGAGGAGAAACTTG
AGGCGGACCGGCAGGCGTTCTTGGCAGCCATTCGGGGGGAGCCAGCACCG
ACAGCTTCTACAACTACTCCTGCTGCTGCGACTGCTGCTCCTACTCCTGC
TGCTGCTGCTACTCCTGCTCTTCCTCCTTCCTCCACCAGCACCACTACCA
TGCCCCTACCTCCCCCACCCACCTCCTCTGCAACCCGTCTGGGCCGGCTC
TTCCAATCGGACGGCGACTTGGAGGACGAGGATGAGGACGCCCTGTCGAG
AGCCGCCCAACAGAAGACCTCCCTCGAGATTCTTCAAGAGCAAGTTAAGA
AGAAGGAACTTAAGCCCGTCGACCATTCCCAAGTCGCCTACCTTCCCATC
CGCAAGAAACTCTACATCATCCCCCGTGCCCTCCACGGCCTCACAGACAC
GGAACTCGCCTCCCGCCGGGACCTCCTGGAGATCAAAGTGCGAGGAAAGG
GCTGTCCGGCGCCTCTCGAGACATGGGAGCAATCAGGTTTGCCGGAACGC
GTGCTAGGGCTCCTTAAAAAATGGAAGCTCTTGGAACCCTTTCCCATTCA
ACGGCAGGCCTTGCCCGCCATCATGGCGGGGAGGGACATCATAGGCGTTG
CCAAAACCGGGTCTGGGAAGACACTGGCCTTCCTCTTGCCCCTCTTGCGG
CACATCTTGGATCAGGAGGGGACTTACCCCTTGGGGGAGGGGGAGGGACC
CATTGGGCTCATCATGGCCCCGGCACGGGAGTTGGCAGTACAGATTCATT
TGGAAGCGAAGAAGTTTTGCCGGCCCTTGGGCTTGAGGTGTGTGGCTGTG
TATGGCGGCGCAGGCATCGGCGATCAGATAGGGGAGTTGAAACGAGGTGC
GCACATTGTAGTGTGTACCCCGGGGAGGATGATTGATATCCTGACTATGC
AAGCGGGGAAGCTCATGAGCCTCTCGCGGGTGAGCTTCGTAGTGATGGAT
GAGGCTGATCGGATGTTTGACATGGGTTTCGAACCGCAGATCAAGATGAT
CCTGACAAATGTGCGACCTGACCGACAGACGGTTTTGTTCTCGGCGACGT
TCCCCAAGCAGGTCGAAACGTTGGCCCGAAAGGTCCTGGCATTCCCGTTG
GAGATTCTGGTGGGCGGGCGAAGCGTGGCGTCGGATGCGATCACGCAGTA
CGTGGAAGTGAGGGAGGAAGGGGAAGAGAAGTTCATGCGGTTGTTACAGC
TGTTAGGGGTATGGTACGAGAAGGGGAATGTGTTGATATTCGTGGACACG
CAGGCGAAGTGCGACAACCTGTTTGCGGATTTGATGAAGAGTGGCTACCC
TTGCTTGTCCCTACACGGGGGCATGGATCAGATGGACCGCGACTCGACGA
TCCATGACTTTAAATCGAGGGCGAGGACATTGATGGTGGCGACGAGCGTG
GCAGGGCGGGGGTTGGACGTGCCGGAATTGTGTTGTGTGATTAATTTCTC
ATGCCCGAACCACTTGGAAGACTATGTCCACCGTGTCGGGAGGACGGGGA
GGGCGGGAAGGAAAGGGACGGCCTACACCTTCATTACCCCGGAGGAAGAT
CAGTACGCGCCGTTGTTATACAAGGCGTTGACGCAGAGCAAGCAGGAGGT
GCCTCCGGAGCTGAGGAGGATGGCCGAGGCTTTCCAAGAGAAGGTGAGCC
AGGGCCAGGCCCAGTGGGCGGGATCGGGCTTTGGGGGCAAAGGGTTCACG
TTTGATGAGAGCGAGCAGACGGACGCCCAGCGCACGGCGGCGTTGCAGAA
ACGGCAGTATCAGATAGAGCAGGGTGATGAGGAGGAGCAGGAAGAGGAGG
AGGATCAACGGAAGAAGCAAGCTTCTGCAGCAGCTGCAGCGGCGGGAGCG
GCAGCCGCAGCAGGAATAGGAGGAGGAGGAGCAGGCGCCTCTGTACTTCC
TAGCCTTGCCGGAGGAGGTGGTGGAGGAATTTCCGCTGCTCTTGAACGTG
CGAAGGCGCTGGCTGAGAAGCTCAAACAAGGAGGACCGTCTGTGACTGTT
GTCCCCTCTGCAGCAGCTACAGCAGTGACACCCTCCGCGTCTTCCCCTCC
CTCCGCTTCTCCGTCCTCCACCTCCGACGCCTTGGCCCGCGCTCGGGCCG
TGGCTGGAAAACTTGCTGCTGCTGTCCCTTCTTTTTCCTCTGCTGCGGCC
ACTGCAGGTGCTGCTGGTGGCGGTTCTTCGGGCTCCTCGTCAATCACAGC
AGCGGATGCTGTCAAGGCCGCGTTGGCTATTGCTGGTGGGAAGTTAATGA
GTAAGAAGGAGACTGAGCACTTTTTTGAAGAACTGGACGTTAACGATTAC
CCGCAGCAGGCACGGTGGAAGGCCACGCAAAAGGAATCTGTTTCTCAAGT
GCAGGAGCGGACGGAGTGTTCGGTGATTACGAGGGGGAGGTATGTCGCCC
CTGGGCAGGAACACACGCTGGAGGCGGGTGAGAGGAAGCTTTATCTTTTG
ATTGAAGGCAAGACCGAGCTTGCGGTCCGGCAGGCGCGGAGAGAGTTCCA
GCGGATTTTGGATGAGGAGACTTTGAGGGTGGGGGCTCGACCGCAATTTG
GACGGTTTCACGTCCCTTTTACTACCACCACCCCATCCATCCCCCACTAT
GCAGGCAGGCCGCAGGAGGGCGATGTACATATTCCCCTCTCTTCCCTTCC
TCGGTTCTCCGCGAAAGAAGCCGTGAACTTTCGATGGGCCTTTCTGTGA back to topprotein sequence of NO16G00540.1 >NO16G00540.1-protein ID=NO16G00540.1-protein|Name=NO16G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1483bp
MTDDKPSGSSKSNKSGKNSSSRKRERDSSLPRGSSGRSSSGSIHHHHHRN
DRSDRSDRNSEKEKKQKREKRRGETSRSPSPSNISSAAASSSRHTDPSTS
SSSSRHHHHRDRDRDREKESESQHRRRGSGGGGGGGEGGSSSRRRSRSRS
NDRSRSRSRSRERKEKRSRLEKKKERPDREREREKGRDRDGGREGERGER
KREHRRGGNGGGGGGGGGGTGGGGTGGEAEKEEKARAASTASAAALSVIA
RLNQKMQQKPAAIVVPSSLPSAPPAAPGQASAALAQFVAAQQLLKQQQQQ
QQQQNQAGTAAAVAAASTLLASSSPPSASAAPPATTTTTEEAGQGGQGGQ
EVEDAEAVAEREMQKRAERIRLFQEERRQKEAAAAAAAAAAAAAASTTAR
LAQAALALTGSVGGKIGGGIKGVKKWSLEDDGEEEEELEGGMVPSERRSG
SNDTPSSVLSVEKHLSLNGMEEDEEEEGDPLDAFMSSLERNVEGGRERQD
GGEGGGVRAQAEMYGAFGTGDGIGGGRTGGRAGGRRGKANGGYDPLGSNT
ITMEELFGGGRGVGRGEKKETGEEEEEEDEEKLEADRQAFLAAIRGEPAP
TASTTTPAAATAAPTPAAAATPALPPSSTSTTTMPLPPPPTSSATRLGRL
FQSDGDLEDEDEDALSRAAQQKTSLEILQEQVKKKELKPVDHSQVAYLPI
RKKLYIIPRALHGLTDTELASRRDLLEIKVRGKGCPAPLETWEQSGLPER
VLGLLKKWKLLEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPLLR
HILDQEGTYPLGEGEGPIGLIMAPARELAVQIHLEAKKFCRPLGLRCVAV
YGGAGIGDQIGELKRGAHIVVCTPGRMIDILTMQAGKLMSLSRVSFVVMD
EADRMFDMGFEPQIKMILTNVRPDRQTVLFSATFPKQVETLARKVLAFPL
EILVGGRSVASDAITQYVEVREEGEEKFMRLLQLLGVWYEKGNVLIFVDT
QAKCDNLFADLMKSGYPCLSLHGGMDQMDRDSTIHDFKSRARTLMVATSV
AGRGLDVPELCCVINFSCPNHLEDYVHRVGRTGRAGRKGTAYTFITPEED
QYAPLLYKALTQSKQEVPPELRRMAEAFQEKVSQGQAQWAGSGFGGKGFT
FDESEQTDAQRTAALQKRQYQIEQGDEEEQEEEEDQRKKQASAAAAAAGA
AAAAGIGGGGAGASVLPSLAGGGGGGISAALERAKALAEKLKQGGPSVTV
VPSAAATAVTPSASSPPSASPSSTSDALARARAVAGKLAAAVPSFSSAAA
TAGAAGGGSSGSSSITAADAVKAALAIAGGKLMSKKETEHFFEELDVNDY
PQQARWKATQKESVSQVQERTECSVITRGRYVAPGQEHTLEAGERKLYLL
IEGKTELAVRQARREFQRILDEETLRVGARPQFGRFHVPFTTTTPSIPHY
AGRPQEGDVHIPLSSLPRFSAKEAVNFRWAFL* back to topmRNA from alignment at chr16:187952..193231+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO16G00540.1 ID=NO16G00540.1|Name=NO16G00540.1|organism=Nannochloropsis oceanica|type=mRNA|length=5280bp|location=Sequence derived from alignment at chr16:187952..193231+ (Nannochloropsis oceanica)
ATGACGGACGACAAGCCCAGCGGCAGCAGCAAGAGCAACAAGAGCGGAAA
GAACAGCAGCAGCCGGAAGCGAGAGCGAGATAGCTCCCTTCCGCGGGGCA
GCAGCGGGCGCAGCAGCAGTGGCAGCATCCACCACCACCATCACCGTAAT
GATCGCAGCGACCGCAGCGACCGCAATAGTGAGAAGGAAAAGAAGCAGAA
GCGCGAAAAACGGCGAGGAGAGACGAGTCGGAGTCCTTCCCCCTCCAATA
TTTCCTCCGCCGCTGCGTCCTCCTCCCGCCACACCGACCCATCCACCTCC
TCGTCCTCCTCCCGTCACCACCACCACAGGGATCGGGACCGAGACCGAGA
AAAAGAGTCTGAGAGTCAACATAGGCGGAGGGGGAGTGGGGGAGGAGGGG
GAGGTGGAGAGGGAGGAAGCAGCAGCCGCAGACGAAGCAGGAGCAGGAGC
AACGACAGGAGCAGGAGCCGGTCGCGGTCGCGGGAACGGAAGGAGAAGAG
GAGTAGGCTGGAGAAGAAGAAAGAGAGGCCTGATAGGGAGAGGGAAAGGG
AGAAGGGGAGAGACAGGGATGGAGGCAGGGAAGGAGAGAGGGGGGAGAGA
AAGCGGGAGCACCGTCGGGGAGGGAATGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAACAGGAGGAGGAGGAACAGGAGGGGAGGCCGAGAAGGAGGAAA
AGGCCAGGGCCGCCTCTACTGCAAGCGCTGCTGCCCTCTCCGTGATTGCT
CGACTCAACCAAAAGATGCAACAGAAGCCGGCCGCTATTGTCGTTCCTTC
TTCCCTCCCTTCCGCGCCTCCTGCTGCTCCGGGGCAAGCATCCGCCGCGC
TCGCGCAATTTGTGGCTGCGCAGCAGCTTCTGAAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGAACCAAGCAGGGACAGCAGCAGCAGTAGCGGCAGCGAG
TACCCTTCTAGCCTCCTCCTCCCCTCCTTCTGCATCTGCAGCACCGCCGG
CGACGACGACCACGACGGAGGAAGCGGGGCAGGGAGGGCAGGGAGGGCAG
GAGGTGGAAGATGCTGAGGCAGTAGCGGAGAGAGAGATGCAGAAAAGGGC
GGAGCGTATTCGGCTTTTCCAGGAGGAACGTCGGCAGAAGGAAGCTGCTG
CTGCTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCCAGCACCACAGCTAGG
CTGGCGCAGGCCGCTCTGGCCCTGACTGGGAGTGTGGGTGGAAAGATAGG
AGGAGGGATAAAGGGAGTGAAAAAGTGGTCTTTGGAGGATGATGGAGAGG
AGGAGGAGGAGTTGGAGGGAGGGATGGTGCCATCGGAGAGGAGGAGTGGC
AGTAATGATACGCCTTCAAGTGTTTTATCGGTGGAGAAACATCTATCACT
CAATGGGATGGAGGAGGACGAGGAGGAGGAGGGGGATCCCCTCGATGCTT
TCATGTCTTCCCTGGAGAGAAATGTGGAGGGAGGGAGGGAGAGGCAGGAT
GGAGGGGAGGGGGGAGGGGTCCGGGCACAGGCAGAGATGTACGGGGCGTT
CGGCACGGGGGACGGCATAGGGGGAGGGAGGACGGGGGGGAGGGCTGGGG
GGAGGAGGGGGAAGGCGAATGGTGGATATGATCCTTTGGGGAGTAACACG
ATAACGATGGAGGAGCTCTTTGGTGGAGGAAGGGGGGTTGGAAGGTCAGG
AGGGAAGGCAGGGTGGGAGTCGGACACGGACATCGACGGAGAGGACGCGG
AGGAGGATGAGGGAGGGATGATGGACGAGGAGGAGAACGGGAGGCAAGGG
GGGAGAAGAAAGAGACAGGAGAGGAGGAAGAGGAGGAGGACGAGGAGAAA
CTTGAGGCGGACCGGCAGGCGTTCTTGGCAGCCATTCGGGGGGAGCCAGC
ACCGACAGCTTCTACAACTACTCCTGCTGCTGCGACTGCTGCTCCTACTC
CTGCTGCTGCTGCTACTCCTGCTCTTCCTCCTTCCTCCACCAGCACCACT
ACCATGCCCCTACCTCCCCCACCCACCTCCTCTGCAACCCGTCTGGGCCG
GCTCTTCCAATCGGACGGCGACTTGGAGGACGAGGATGAGGACGCCCTGT
CGAGAGCCGCCCAACAGAAGACCTCCCTCGAGATTCTTCAAGAGCAAGTT
AAGAAGAAGGAACTTAAGCCCGTCGACCATTCCCAAGTCGCCTACCTTCC
CATCCGCAAGAAACTCTACATCATCCCCCGTGCCCTCCACGGCCTCACAG
ACACGGAACTCGCCTCCCGCCGGGACCTCCTGGAGATCAAAGTGCGAGGA
AAGGGCTGTCCGGCGCCTCTCGAGACATGGGAGCAATCAGGTTTGCCGGA
ACGCGTGCTAGGGCTCCTTAAAAAATGGAAGCTCTTGGAACCCTTTCCCA
TTCAACGGCAGGCCTTGCCCGCCATCATGGCGGGGAGGGACATCATAGGC
GTTGCCAAAACCGGGTCTGGGAAGACACTGGCCTTCCTCTTGCCCCTCTT
GCGGCACATCTTGGATCAGGAGGGGACTTACCCCTTGGGGGAGGGGGAGG
GACCCATTGGGCTCATCATGGCCCCGGCACGGGAGTTGGCAGTACAGATT
CATTTGGAAGCGAAGAAGTTTTGCCGGCCCTTGGGCTTGAGGTGTGTGGC
TGTGTATGGCGGCGCAGGCATCGGCGATCAGATAGGGGAGTTGAAACGAG
GTGCGCACATTGTAGTGTGTACCCCGGGGAGGATGATTGATATCCTGACT
ATGCAAGCGGGGAAGCTCATGAGCCTCTCGCGGGTGAGCTTCGTAGTGAT
GGATGAGGCTGATCGGATGTTTGACATGGGTTTCGAACCGCAGATCAAGA
TGATCCTGACAAATGTGCGACCTGACCGACAGACGGTTTTGTTCTCGGCG
ACGTTCCCCAAGCAGGTCGAAACGTTGGCCCGAAAGGTCCTGGCATTCCC
GTTGGAGATTCTGGTGGGCGGGCGAAGCGTGGCGTCGGATGCGATCACGC
AGTACGTGGAAGTGAGGGAGGAAGGGGAAGAGAAGTTCATGCGGTTGTTA
CAGCTGTTAGGGGTATGGTACGAGAAGGGGAATGTGTTGATATTCGTGGA
CACGCAGGCGAAGTGCGACAACCTGTTTGCGGATTTGATGAAGAGTGGCT
ACCCTTGCTTGTCCCTACACGGGGGCATGGATCAGATGGACCGCGACTCG
ACGATCCATGACTTTAAATCGAGGGCGAGGACATTGATGGTGGCGACGAG
CGTGGCAGGGCGGGGGTTGGACGTGCCGGAATTGTGTTGTGTGATTAATT
TCTCATGCCCGAACCACTTGGAAGACTATGTCCACCGTGTCGGGAGGACG
GGGAGGGCGGGAAGGAAAGGGACGGCCTACACCTTCATTACCCCGGAGGA
AGATCAGTACGCGCCGTTGTTATACAAGGCGTTGACGCAGAGCAAGCAGG
AGGTGCCTCCGGAGCTGAGGAGGATGGCCGAGGCTTTCCAAGAGAAGGTG
AGCCAGGGCCAGGCCCAGTGGGCGGGATCGGGCTTTGGGGGCAAAGGGTT
CACGTTTGATGAGAGCGAGCAGACGGACGCCCAGCGCACGGCGGCGTTGC
AGAAACGGCAGTATCAGATAGAGCAGGGGTTGGTCACCGAGGAGGGGAAG
GGGGGAGGGGGGAGGGGGGGGACAGTGATGAGGAGGAGCAGGAAGAGGAG
GAGGATCAACGGAAGAAGCAAGCTTCTGCAGCAGCTGCAGCGGCGGGAGC
GGCAGCCGCAGCAGGAATAGGAGGAGGAGGAGCAGGCGCCTCTGTACTTC
CTAGCCTTGCCGGAGGAGGTGGTGGAGGAATTTCCGCTGCTCTTGAACGT
GCGAAGGCGCTGGCTGAGAAGCTCAAACAAGGAGGACCGTCTGTGACTGT
TGTCCCCTCTGCAGCAGCTACAGCAGTGACACCCTCCGCGTCTTCCCCTC
CCTCCGCTTCTCCGTCCTCCACCTCCGACGCCTTGGCCCGCGCTCGGGCC
GTGGCTGGAAAACTTGCTGCTGCTGTCCCTTCTTTTTCCTCTGCTGCGGC
CACTGCAGGTGCTGCTGGTGGCGGTTCTTCGGGCTCCTCGTCAATCACAG
CAGCGGATGCTGTCAAGGCCGCGTTGGCTATTGCTGGTGGGAAGTTAATG
AGTAAGAAGGAGACTGAGCACTTTTTTGAAGAACTGGACGTTAACGATTA
CCCGCAGCAGGCACGGTGGAAGGCCACGCAAAAGGAATCTGTTTCTCAAG
TGCAGGAGCGGACGGAGTGTTCGGTGATTACGAGGGGGAGGTATGTCGCC
CCTGGGCAGGAACACACGCTGGAGGCGGGTGAGAGGAAGCTTTATCTTTT
GATTGAAGGCAAGACCGAGCTTGCGGTCCGGCAGGCGCGGAGAGAGTTCC
AGCGGATTTTGGATGAGGAGACTTTGAGGGTGGGGGCTCGACCGCAATTT
GGACGGTACTCTGTGCTATAAAAGAGGGAGGGAAGGATGGGGGGAGGGGA
AAAGGGGAGGGACGGAGAAAGGGTGGCGGGAAGGAGAAGGAAGACCTCGG
GGGTTTGTTCATGGAGAAGAAGGAGGGGCGGAGGAAAGGGAGGGAGACAT
TGAGGACAAGAGGTGAAGATTTTGAAGAGAGCAGCAAGGGATAGCAGCAG
GAGCAGCAATAGCAGTGGATCAGAAGCTAGCCGATTGCGGCAAGTGATGA
CACCCACTCTCATAGCTTGCCTAGCAGTAAAGGCATTCATTGATCGATGC
CTCTCCCTCCCTCCCTTCCTCCCTCCCTACTCCTAGGTTTCACGTCCCTT
TTACTACCACCACCCCATCCATCCCCCACTATGCAGGCAGGCCGCAGGAG
GGCGATGTACATATTCCCCTCTCTTCCCTTCCTCGGTTCTCCGCGAAAGA
AGGTACACAACCTGTCCTCAGCCCCTCCCTCCCGTCTTTTCCGACGTTTT
CACTATGCATATGTCGTGAAGGGAGGGAGGCAGACATGGAGGGAAGGAAG
AAAAATGAGAGACGGGAGACGATATCAGCAGCATTCACATTCTGTCTTTC
CGCTTCTCCCTTTTCTCACTCTCACTCTCTCTCTTAACCTCTTTCTGCTG
CCGTTTTGGGTTGCTTTGCTGCTGCTGTTGCTGCCAATTATCGGGCCACT
CATTACCACTGCTTCTTCTCTCCTACTTCCACCATTATCGTCGAAATTGG
CACTTATTTACCTTTGCTACGTCCTTGTCATCGTCGTCCTCTTCCTCCCA
GCCGTGAACTTTCGATGGGCCTTTCTGTGA back to topCoding sequence (CDS) from alignment at chr16:187952..193231+ >NO16G00540.1 ID=NO16G00540.1|Name=NO16G00540.1|organism=Nannochloropsis oceanica|type=CDS|length=4449bp|location=Sequence derived from alignment at chr16:187952..193231+ (Nannochloropsis oceanica)
ATGACGGACGACAAGCCCAGCGGCAGCAGCAAGAGCAACAAGAGCGGAAA
GAACAGCAGCAGCCGGAAGCGAGAGCGAGATAGCTCCCTTCCGCGGGGCA
GCAGCGGGCGCAGCAGCAGTGGCAGCATCCACCACCACCATCACCGTAAT
GATCGCAGCGACCGCAGCGACCGCAATAGTGAGAAGGAAAAGAAGCAGAA
GCGCGAAAAACGGCGAGGAGAGACGAGTCGGAGTCCTTCCCCCTCCAATA
TTTCCTCCGCCGCTGCGTCCTCCTCCCGCCACACCGACCCATCCACCTCC
TCGTCCTCCTCCCGTCACCACCACCACAGGGATCGGGACCGAGACCGAGA
AAAAGAGTCTGAGAGTCAACATAGGCGGAGGGGGAGTGGGGGAGGAGGGG
GAGGTGGAGAGGGAGGAAGCAGCAGCCGCAGACGAAGCAGGAGCAGGAGC
AACGACAGGAGCAGGAGCCGGTCGCGGTCGCGGGAACGGAAGGAGAAGAG
GAGTAGGCTGGAGAAGAAGAAAGAGAGGCCTGATAGGGAGAGGGAAAGGG
AGAAGGGGAGAGACAGGGATGGAGGCAGGGAAGGAGAGAGGGGGGAGAGA
AAGCGGGAGCACCGTCGGGGAGGGAATGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAACAGGAGGAGGAGGAACAGGAGGGGAGGCCGAGAAGGAGGAAA
AGGCCAGGGCCGCCTCTACTGCAAGCGCTGCTGCCCTCTCCGTGATTGCT
CGACTCAACCAAAAGATGCAACAGAAGCCGGCCGCTATTGTCGTTCCTTC
TTCCCTCCCTTCCGCGCCTCCTGCTGCTCCGGGGCAAGCATCCGCCGCGC
TCGCGCAATTTGTGGCTGCGCAGCAGCTTCTGAAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGAACCAAGCAGGGACAGCAGCAGCAGTAGCGGCAGCGAG
TACCCTTCTAGCCTCCTCCTCCCCTCCTTCTGCATCTGCAGCACCGCCGG
CGACGACGACCACGACGGAGGAAGCGGGGCAGGGAGGGCAGGGAGGGCAG
GAGGTGGAAGATGCTGAGGCAGTAGCGGAGAGAGAGATGCAGAAAAGGGC
GGAGCGTATTCGGCTTTTCCAGGAGGAACGTCGGCAGAAGGAAGCTGCTG
CTGCTGCTGCTGCTGCAGCAGCAGCAGCAGCAGCCAGCACCACAGCTAGG
CTGGCGCAGGCCGCTCTGGCCCTGACTGGGAGTGTGGGTGGAAAGATAGG
AGGAGGGATAAAGGGAGTGAAAAAGTGGTCTTTGGAGGATGATGGAGAGG
AGGAGGAGGAGTTGGAGGGAGGGATGGTGCCATCGGAGAGGAGGAGTGGC
AGTAATGATACGCCTTCAAGTGTTTTATCGGTGGAGAAACATCTATCACT
CAATGGGATGGAGGAGGACGAGGAGGAGGAGGGGGATCCCCTCGATGCTT
TCATGTCTTCCCTGGAGAGAAATGTGGAGGGAGGGAGGGAGAGGCAGGAT
GGAGGGGAGGGGGGAGGGGTCCGGGCACAGGCAGAGATGTACGGGGCGTT
CGGCACGGGGGACGGCATAGGGGGAGGGAGGACGGGGGGGAGGGCTGGGG
GGAGGAGGGGGAAGGCGAATGGTGGATATGATCCTTTGGGGAGTAACACG
ATAACGATGGAGGAGCTCTTTGGTGGAGGAAGGGGGGTTGGAAGGGGGGA
GAAGAAAGAGACAGGAGAGGAGGAAGAGGAGGAGGACGAGGAGAAACTTG
AGGCGGACCGGCAGGCGTTCTTGGCAGCCATTCGGGGGGAGCCAGCACCG
ACAGCTTCTACAACTACTCCTGCTGCTGCGACTGCTGCTCCTACTCCTGC
TGCTGCTGCTACTCCTGCTCTTCCTCCTTCCTCCACCAGCACCACTACCA
TGCCCCTACCTCCCCCACCCACCTCCTCTGCAACCCGTCTGGGCCGGCTC
TTCCAATCGGACGGCGACTTGGAGGACGAGGATGAGGACGCCCTGTCGAG
AGCCGCCCAACAGAAGACCTCCCTCGAGATTCTTCAAGAGCAAGTTAAGA
AGAAGGAACTTAAGCCCGTCGACCATTCCCAAGTCGCCTACCTTCCCATC
CGCAAGAAACTCTACATCATCCCCCGTGCCCTCCACGGCCTCACAGACAC
GGAACTCGCCTCCCGCCGGGACCTCCTGGAGATCAAAGTGCGAGGAAAGG
GCTGTCCGGCGCCTCTCGAGACATGGGAGCAATCAGGTTTGCCGGAACGC
GTGCTAGGGCTCCTTAAAAAATGGAAGCTCTTGGAACCCTTTCCCATTCA
ACGGCAGGCCTTGCCCGCCATCATGGCGGGGAGGGACATCATAGGCGTTG
CCAAAACCGGGTCTGGGAAGACACTGGCCTTCCTCTTGCCCCTCTTGCGG
CACATCTTGGATCAGGAGGGGACTTACCCCTTGGGGGAGGGGGAGGGACC
CATTGGGCTCATCATGGCCCCGGCACGGGAGTTGGCAGTACAGATTCATT
TGGAAGCGAAGAAGTTTTGCCGGCCCTTGGGCTTGAGGTGTGTGGCTGTG
TATGGCGGCGCAGGCATCGGCGATCAGATAGGGGAGTTGAAACGAGGTGC
GCACATTGTAGTGTGTACCCCGGGGAGGATGATTGATATCCTGACTATGC
AAGCGGGGAAGCTCATGAGCCTCTCGCGGGTGAGCTTCGTAGTGATGGAT
GAGGCTGATCGGATGTTTGACATGGGTTTCGAACCGCAGATCAAGATGAT
CCTGACAAATGTGCGACCTGACCGACAGACGGTTTTGTTCTCGGCGACGT
TCCCCAAGCAGGTCGAAACGTTGGCCCGAAAGGTCCTGGCATTCCCGTTG
GAGATTCTGGTGGGCGGGCGAAGCGTGGCGTCGGATGCGATCACGCAGTA
CGTGGAAGTGAGGGAGGAAGGGGAAGAGAAGTTCATGCGGTTGTTACAGC
TGTTAGGGGTATGGTACGAGAAGGGGAATGTGTTGATATTCGTGGACACG
CAGGCGAAGTGCGACAACCTGTTTGCGGATTTGATGAAGAGTGGCTACCC
TTGCTTGTCCCTACACGGGGGCATGGATCAGATGGACCGCGACTCGACGA
TCCATGACTTTAAATCGAGGGCGAGGACATTGATGGTGGCGACGAGCGTG
GCAGGGCGGGGGTTGGACGTGCCGGAATTGTGTTGTGTGATTAATTTCTC
ATGCCCGAACCACTTGGAAGACTATGTCCACCGTGTCGGGAGGACGGGGA
GGGCGGGAAGGAAAGGGACGGCCTACACCTTCATTACCCCGGAGGAAGAT
CAGTACGCGCCGTTGTTATACAAGGCGTTGACGCAGAGCAAGCAGGAGGT
GCCTCCGGAGCTGAGGAGGATGGCCGAGGCTTTCCAAGAGAAGGTGAGCC
AGGGCCAGGCCCAGTGGGCGGGATCGGGCTTTGGGGGCAAAGGGTTCACG
TTTGATGAGAGCGAGCAGACGGACGCCCAGCGCACGGCGGCGTTGCAGAA
ACGGCAGTATCAGATAGAGCAGGGTGATGAGGAGGAGCAGGAAGAGGAGG
AGGATCAACGGAAGAAGCAAGCTTCTGCAGCAGCTGCAGCGGCGGGAGCG
GCAGCCGCAGCAGGAATAGGAGGAGGAGGAGCAGGCGCCTCTGTACTTCC
TAGCCTTGCCGGAGGAGGTGGTGGAGGAATTTCCGCTGCTCTTGAACGTG
CGAAGGCGCTGGCTGAGAAGCTCAAACAAGGAGGACCGTCTGTGACTGTT
GTCCCCTCTGCAGCAGCTACAGCAGTGACACCCTCCGCGTCTTCCCCTCC
CTCCGCTTCTCCGTCCTCCACCTCCGACGCCTTGGCCCGCGCTCGGGCCG
TGGCTGGAAAACTTGCTGCTGCTGTCCCTTCTTTTTCCTCTGCTGCGGCC
ACTGCAGGTGCTGCTGGTGGCGGTTCTTCGGGCTCCTCGTCAATCACAGC
AGCGGATGCTGTCAAGGCCGCGTTGGCTATTGCTGGTGGGAAGTTAATGA
GTAAGAAGGAGACTGAGCACTTTTTTGAAGAACTGGACGTTAACGATTAC
CCGCAGCAGGCACGGTGGAAGGCCACGCAAAAGGAATCTGTTTCTCAAGT
GCAGGAGCGGACGGAGTGTTCGGTGATTACGAGGGGGAGGTATGTCGCCC
CTGGGCAGGAACACACGCTGGAGGCGGGTGAGAGGAAGCTTTATCTTTTG
ATTGAAGGCAAGACCGAGCTTGCGGTCCGGCAGGCGCGGAGAGAGTTCCA
GCGGATTTTGGATGAGGAGACTTTGAGGGTGGGGGCTCGACCGCAATTTG
GACGGTTTCACGTCCCTTTTACTACCACCACCCCATCCATCCCCCACTAT
GCAGGCAGGCCGCAGGAGGGCGATGTACATATTCCCCTCTCTTCCCTTCC
TCGGTTCTCCGCGAAAGAAGCCGTGAACTTTCGATGGGCCTTTCTGTGA back to top
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