NO15G00400.1, NO15G00400.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO15G00400.1
Unique NameNO15G00400.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3548
Alignment locationchr15:136164..141276 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:136164..141276 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO15G00400.1 vs.
Match: EWM20785.1 (Isopenicillin N synthase [Nannochloropsis gaditana])

HSP 1 Score: 486.1 bits (1250), Expect = 1.400e-133
Identity = 240/342 (70.18%), Postives = 272/342 (79.53%), Query Frame = 0
Query:  189 SSPTACPLPQLHHAALPIVDFSNTDEAPSVLYKACKEFGFFYLVNHGVPQSLIDDMLAQSKAFFSLPLSAKKELSASLNKINRGYTGFEEETLDPALQKGKGDTKEGYYIGREVPAESEEAKAFPLHGPNVWPAKEVLPLWRDTMTSYFAALSSLGLQTVHLLLRSLHLPESAFDANFTRPMAALRLLHYSPQASNPSEGIFAAGAHSDYGMFTFLITDGTPGLQVWREGRKEGGRDGGGIWQDVPAVEGAFIVNLGDMLQRWTNDVFRSTKHRVLIKGGGREGGREGGRYSAPFFYEPNFDTLVECLPGFEGEKGERRYAPVKSGEYLLGKYRQTHKDFVE 531
            S+P    L  L+ AALPIVD +  +EAP +LY AC++FGFFYL+NHGVPQ+LIDDML +SKAFFSLPL  K+++S   NKINRGYT FEEETLDP  Q  +GDTKEG+Y+GREV  ESEEA++FPLHGPNVWP    LP WR  M +YF ALSSLGL+TV LLLR+L LPE   D  FTRPMAALRLLHYS QASNPSEG++AAGAH+DYGMFTFL+TD TPGLQVWR G   G  DG   WQ+VPAVEGAFIVNLGDMLQRWTNDVF+ST HRV+I     +   E GRYSAPFFYEPNFDTLV CLPGF  E    R+ P+KSGEYLLGKYRQTH+DFVE
Sbjct:    7 STPQVLSLHALNRAALPIVDLAAPEEAPRILYDACRDFGFFYLINHGVPQALIDDMLTESKAFFSLPLDEKEKVSVRHNKINRGYTAFEEETLDPTRQT-RGDTKEGFYLGREVAMESEEARSFPLHGPNVWPDPVKLPRWRPVMNAYFTALSSLGLRTVRLLLRALGLPEHHLDDTFTRPMAALRLLHYSTQASNPSEGVYAAGAHTDYGMFTFLMTDHTPGLQVWRGG--AGQEDGS--WQEVPAVEGAFIVNLGDMLQRWTNDVFKSTAHRVVI-----QEATEEGRYSAPFFYEPNFDTLVACLPGFVKEGEVPRHVPIKSGEYLLGKYRQTHRDFVE 338          
The following BLAST results are available for this feature:
BLAST of NO15G00400.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM20785.11.400e-13370.18Isopenicillin N synthase [Nannochloropsis gaditana... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G00400NO15G00400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO15G00400.1NO15G00400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO15G00400.1.cds1NO15G00400.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G00400.1.cds2NO15G00400.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G00400.1.cds3NO15G00400.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G00400.1.cds4NO15G00400.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G00400.1.cds5NO15G00400.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO15G00400.1.cds6NO15G00400.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO15G00400.1 ID=NO15G00400.1|Name=NO15G00400.1|organism=Nannochloropsis oceanica|type=mRNA|length=3548bp
AGGATTGTACAATGAGTGCCTTTGTATCGATACAAGAAGCGAGACACGAC
ACCACCTCTGTCTCGTGGCATTTGAATGAAAAATGGGCAGGCAAGCTTCT
CTCTTTTGGCCCATGGGAAATGTATGTTCAGGGCGCGATGGGGGACGGGA
TAATGTCAGAGCAGCATAATGTAACGCAGAAGAACGAGGTTTGGTGAGTC
TAGCCTCTGGAGGGGGGACGAGCAGGTGGCAGGAGGAGATCGTGACTCGA
TGGGATTTGTAAACTCATTTAAATAAGAGTGTCATATGGGAATCCCATGT
ATGGTCCTTTGGAAAATGAGCAGGCCTTGCTTCTCTCTCTGGCCCATTAG
CCATGTGTGTTGTGCGCACAGTGAGACCACACATGGTGACATGATCAGAG
GCAAAATCACAAAACGGGGAGAAATAGTAATCTCGCCTCTAGACGAATGG
CAAACAGATGGCTCTGGAAAAGGGAGGTTCACTGAATCATTTATTGGGAC
ATACACACGCTGTAAGGAATCCGACGGGTTATGATGTTTATCACATGGGC
CTCCACAAGGCCTCGCACCGCCGCCTTGGGCAAGGCCAACGTATCATACA
AACACAGCTCTCGACCGTCAGCTAGAATCCGAACGCACGCAGCAAGTATA
ATTTGTGCCAATACAAGAAGGAGGATGGGAGGGGGGCGCAAACCATTTGC
CAGAAAAGATAAAGATTAAAAAAAAAAAAGATGGAAATGTTCTCGTTTAG
GGGTCTCACAACCCGGTGGCATCGGAGGAAGCAGGGTTCAATACAACAAG
GCGTGGTCTGTGTAAGCAATCCTGCTGTTCAGTGCTTCCTGAGAGATGAA
TATGTACAAGAACACACATCTATGATATTGTATTATTTGCTTTTACGAAG
GAAAAGCAACCGACTTACTTAACCGATTTTCTCTCATCGTACTGATGGAT
TATGGATAGGGATGGATTTTGATTTTTTCCGCCTACTGTGGTGGTTCTTT
CGTCCTCTAGAGCTATCGCATGCAACCTGACGTCCACTAGATTTTGCATA
CGAGGGGGAGCCTTCCAACAAGAAATTGCTGAATGTTCACCCCTAATTCC
TTGTCCGAGTTTTACTTGCGGCTTTGACAGGTTTTTCGATCAGGCAAAGT
CCCCGGACGGCCCGGCCCGCACAGGGCCAGGAGAAGGGAGGGAGGGAGTT
CTGCCTATCGTACGCGGAGTGCATCGCTGCTGCTTCCTTTGCGCTCAATA
AAATGACTAACACAGGTGAGAGGGAGGGCACGGTGGGCGAGGACAAGGTG
AAGAACACGGTAGAGGTGGTTTCCGGCAAAGGAAGGCTTACACGAGGAGG
AGGCATTGAGCCGCGACCCTTCAAAAGAGGTCTTTGGCAGTCATCATTCA
AATTACTCTCAGACAAAATCACTAAAAAATTAACCCTGGCTTTAATTTCT
GTTAAATGACATGTTTCAGTGATTGCATTTGTTGAGATTCAATGATTACT
TTCATATTTAATGGTCGCAGTAATTCAAGTGGAGGCTACTGTTGACATCA
GGGTGCTTTGAGTAGAACTTGTGATATTTCTATGCTTTCTATTTTACTAT
ACTTTCATGACTTGCAGTGTTACATCTTACTCTTTTCGTAGCAGGTGCAT
CATTCTCCTCATTCCTCTTTTTCTTCCCCCTTTCCCTTTTTCCTCCTGCC
TTCTCTTCTTCCTCTTCCTCCTTCTTCCCTCGTCCCCCATACCACTCCCA
CCAGCAGGAGCGCCCCCACAGTTTCGGCCAGGAATGTGACAAAGATTACA
TACCCCCTTCTCCATGCCTCCCCTGCGGGCACTCGTAGAAGGGAGGGAGG
GACGGCGGGAAGGAGGGCGGGGGGGAGGGGGTGCCAGTCGTCTTGATCAT
TATGGCGGACCCCGAGCCAGGGGAGGGGAATGGGGAGGAAGGAGAAAGGG
TGGGAATGGTCGAGGGAGGGGAGAGGGTAGCGAAGGTGGAGGGGGAGGGA
GAAGGAGAGGGAGACGAGGGAAGGGACGGGAGAAGGGAGGGAGGAAAGGT
GAAAGAGGAGGGCGATGCAGTGCTGGGAGGAATGGGAGTAAGGCCTTTCT
ACATCGATAGGCCCGGGAGCTGTGAGAAGGAGAGGGCGAGAGAAGGGGGG
GAGGGAAGGAGGGAGGGAGGGGGGGAAGAAATTGTGGCGTTCCGACAATT
GGTACGTGTCGATGTAGGCGCCTTGGGGCAATTGAAACAGGAGGAGGAGG
GAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGGATGAAGAGGAATATTCTGGAAGGAGTAGTGGACTTCGC
GGTGCAATCCTGGAGGGCCTGGCGCCGTAACGTATTTGCCGTTCGACCGT
TGGGCGCAACGCCGATGGGATGCGGCTGCACTGTTTCAGAAAGGGCCCCT
TGCCCCGTCGTCATGTCCTCCCCCACCGCCTGCCCCCTCCCTCAACTCCA
CCATGCCGCCCTTCCTATCGTGGACTTCTCCAATACTGACGAGGCTCCGT
CAGTTCTGTATAAAGCCTGCAAGGAATTTGGTTTTTTTTACCTCGTCAAT
CACGGCGTGCCCCAGAGCCTTATCGACGACATGTTGGCCCAGTCCAAGGC
CTTCTTTTCCCTTCCCCTCTCCGCCAAAAAAGAGCTCTCCGCCTCCCTCA
ACAAAATAAATCGCGGTTATACGGGCTTTGAAGAAGAGACCCTCGATCCG
GCATTGCAGAAAGGAAAGGGGGACACGAAAGAAGGTTATTATATAGGGAG
GGAAGTCCCAGCGGAGAGCGAGGAGGCCAAGGCGTTTCCTCTGCACGGAC
CCAACGTCTGGCCGGCAAAGGAAGTGCTCCCGTTATGGAGAGATACCATG
ACCTCGTATTTCGCAGCGCTCTCCTCCCTGGGGCTCCAGACCGTCCACCT
TCTCCTTCGCTCCCTCCATCTTCCCGAAAGCGCTTTTGATGCCAATTTTA
CGCGCCCCATGGCCGCCTTGCGATTGTTGCATTACTCACCTCAGGCCTCT
AACCCGTCTGAAGGCATCTTTGCCGCAGGTGCCCACTCGGACTACGGTAT
GTTCACCTTCCTGATCACTGACGGGACGCCTGGGCTGCAGGTCTGGAGGG
AGGGAAGGAAGGAGGGAGGGAGGGATGGAGGGGGCATATGGCAGGATGTA
CCGGCGGTAGAGGGGGCGTTCATTGTGAATCTAGGCGATATGCTCCAGCG
CTGGACCAACGATGTGTTTCGATCCACCAAGCACCGGGTACTGATCAAGG
GGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGTTATAGTGCCCCTTTC
TTTTATGAGCCGAATTTTGATACGCTTGTGGAGTGCTTGCCCGGGTTCGA
GGGGGAGAAGGGGGAAAGACGATATGCACCAGTTAAAAGTGGGGAGTATC
TACTCGGGAAGTACCGACAGACCCACAAGGACTTCGTGGAGGGGAAGCCG
AAGCCGAAGCAGGAGGAGGAGGGGGGAGGAGAGGGAGGGGGGAAATAA
back to top

protein sequence of NO15G00400.1

>NO15G00400.1-protein ID=NO15G00400.1-protein|Name=NO15G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=549bp
MADPEPGEGNGEEGERVGMVEGGERVAKVEGEGEGEGDEGRDGRREGGKV
KEEGDAVLGGMGVRPFYIDRPGSCEKERAREGGEGRREGGGEEIVAFRQL
VRVDVGALGQLKQEEEGGGGGGGGGGGGGGGGGGGGGMKRNILEGVVDFA
VQSWRAWRRNVFAVRPLGATPMGCGCTVSERAPCPVVMSSPTACPLPQLH
HAALPIVDFSNTDEAPSVLYKACKEFGFFYLVNHGVPQSLIDDMLAQSKA
FFSLPLSAKKELSASLNKINRGYTGFEEETLDPALQKGKGDTKEGYYIGR
EVPAESEEAKAFPLHGPNVWPAKEVLPLWRDTMTSYFAALSSLGLQTVHL
LLRSLHLPESAFDANFTRPMAALRLLHYSPQASNPSEGIFAAGAHSDYGM
FTFLITDGTPGLQVWREGRKEGGRDGGGIWQDVPAVEGAFIVNLGDMLQR
WTNDVFRSTKHRVLIKGGGREGGREGGRYSAPFFYEPNFDTLVECLPGFE
GEKGERRYAPVKSGEYLLGKYRQTHKDFVEGKPKPKQEEEGGGEGGGK*
back to top

mRNA from alignment at chr15:136164..141276+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO15G00400.1 ID=NO15G00400.1|Name=NO15G00400.1|organism=Nannochloropsis oceanica|type=mRNA|length=5113bp|location=Sequence derived from alignment at chr15:136164..141276+ (Nannochloropsis oceanica)
AGGATTGTACAATGAGTGCCTTTGTATCGATACAAGAAGCGAGACACGAC ACCACCTCTGTCTCGTGGCATTTGAATGAAAAATGGGCAGGCAAGCTTCT CTCTTTTGGCCCATGGGAAATGTATGTTCAGGGCGCGATGGGGGACGGGA TAATGTCAGAGCAGCATAATGTAACGCAGAAGAACGAGGTTTGGTGAGTC TAGCCTCTGGAGGGGGGACGAGCAGGTGGCAGGAGGAGATCGTGACTCGA TGGGATTTGTAAACTCATTTAAATAAGAGTGTCATATGGGAATCCCATGT ATGGTCCTTTGGAAAATGAGCAGGCCTTGCTTCTCTCTCTGGCCCATTAG CCATGTGTGTTGTGCGCACAGTGAGACCACACATGGTGACATGATCAGAG GCAAAATCACAAAACGGGGAGAAATAGTAATCTCGCCTCTAGACGAATGG CAAACAGATGGCTCTGGAAAAGGGAGGTTCACTGAATCATTTATTGGGAC ATACACACGCTGTAAGGAATCCGACGGGTTATGATGTTTATCACATGGGC CTCCACAAGGCCTCGCACCGCCGCCTTGGGCAAGGCCAACGTATCATACA AACACAGCTCTCGACCGTCAGCTAGAATCCGAACGCACGCAGCAAGTATA ATTTGTGCCAATACAAGAAGGAGGATGGGAGGGGGGCGCAAACCATTTGC CAGAAAAGATAAAGATTAAAAAAAAAAAAGATGGAAATGTTCTCGTTTAG GGGTCTCACAACCCGGTGGCATCGGAGGAAGCAGGGTTCAATACAACAAG GCGTGGTCTGTGTAAGCAATCCTGCTGTTCAGTGCTTCCTGAGAGATGAA TATGTACAAGAACACACATCTATGATATTGTATTATTTGCTTTTACGAAG GAAAAGCAACCGACTTACTTAACCGATTTTCTCTCATCGTACTGATGGAT TATGGATAGGGATGGATTTTGATTTTTTCCGCCTACTGTGGTGGTTCTTT CGTCCTCTAGAGCTATCGCATGCAACCTGACGTCCACTAGATTTTGCATA CGAGGGGGAGCCTTCCAACAAGAAATTGCTGAATGTTCACCCCTAATTCC TTGTCCGAGTTTTACTTGCGGCTTTGACAGGTTTTTCGATCAGGCAAAGT CCCCGGACGGCCCGGCCCGCACAGGGCCAGGAGAAGGGAGGGAGGGAGTT CTGCCTATCGTACGCGGAGTGCATCGCTGCTGCTTCCTTTGCGCTCAATA AAATGACTAACACAGGTGAGAGGGAGGGCACGGTGGGCGAGGACAAGGTG AAGAACACGGTAGAGGTGGTTTCCGGCAAAGGAAGGCTTACACGAGGAGG AGGCATTGAGCCGCGACCCTTCAAAAGAGGTCTTTGGCAGTCATCATTCA AATTACTCTCAGACAAAATCACTAAAAAATTAACCCTGGCTTTAATTTCT GTTAAATGACATGTTTCAGTGATTGCATTTGTTGAGATTCAATGATTACT TTCATATTTAATGGTCGCAGTAATTCAAGTGGAGGCTACTGTTGACATCA GGGTGCTTTGAGTAGAACTTGTGATATTTCTATGCTTTCTATTTTACTAT ACTTTCATGACTTGCAGTGTTACATCTTACTCTTTTCGTAGCAGGTGCAT CATTCTCCTCATTCCTCTTTTTCTTCCCCCTTTCCCTTTTTCCTCCTGCC TTCTCTTCTTCCTCTTCCTCCTTCTTCCCTCGTCCCCCATACCACTCCCA CCAGCAGGAGCGCCCCCACAGTTTCGGCCAGGAATGTGACAAAGATTACA TACCCCCTTCTCCATGCCTCCCCTGCGGGCACTCGTAGAAGGGAGGGAGG GACGGCGGGAAGGAGGGCGGGGGGGAGGGGGTGCCAGTCGTCTTGATCAT TATGGCGGACCCCGAGCCAGGGGAGGGGAATGGGGAGGAAGGAGAAAGGG TGGGAATGGTCGAGGGAGGGGAGAGGGTAGCGAAGGTGGAGGGGGAGGGA GAAGGAGAGGGAGACGAGGGAAGGGACGGGAGAAGGGAGGGAGGAAAGGT GAAAGAGGAGGGCGATGCAGTGCTGGGAGGAATGGGAGTAAGGCCTTTCT ACATCGATAGGCCCGGGAGCTGTGAGAAGGAGAGGGCGAGAGAAGGGGGG GAGGGAAGGAGGGAGGGAGGGGGGGAAGAAATTGTGGCGTTCCGACAATT GGTACGTGTCGATGTAGGCGCCTTGGGGCAATTGAAACAGGAGGAGGAGG GAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGGATGAAGAGGAATATTCTGGAAGGAGTAGTGGACTTCGC GGTGCAATCCTGGAGGGCCTGGCGCCGTAACGGTGAGGGACGGAGCCAAG GAAGGAGGGGAGGACGGACAAAGGGACGTCGAGGGGCAGGTTAGGACGCG GGCCGTGGCCTTAAATGCAGGGGAAGGAGTATTCGGGCAGTAAGATGAAA AGGTAGCAGACAGTATGTAGCCTAGCAACGATCGTTTCGGCTTTTCCTCC TTCTTTTCCTCCTTCTTTTGCTCCTCTGTCTCGTCTTGTGGCATGAGGAA AGGGAATAAACTTTCCTCTTCCATCTCAATTGCCTCCGTCACATGGTACC ACAACAGCTCCCCTCCCTGCTTCCCTTCCTCTTCCTTGTCCTCGCTCCAC TCTAGTATTTGCCGTTCGACCGTTGGGCGCAACGCCGATGGGATGCGGCT GCACTGTTTCAGAAAGGGTAAGGAAGAAGGGAGAGTGGCTTGGGGTGCAA GTGTATGAAGGAGTGATAGGAGGGAGGCTTGTTGCGGTGGGGTTGATGGT ACGTGGGTAGAGAAGGACGCGGACGGAGAGAGGGCAAAGAAAAGGTGGAG GCCTGGAGGCACAGTGGTCCATGCAGAGGAGGACATGGAAGAAGCATTAG TTGAGAGGTGAATGATCCCCAAGCGCGCCACGCCGGCCTCCCCAACCGCG GCCAGGGGAGGTAAGAGGGGTAGGTCGACGTGCGCAGCCTCGTGGCAGAA CGCAGAGGCAGACACGACTCGGTGGAGCAGCAGATGAAAAAGGGCGTGGA AAAGCAGCAAGAAAGGCGGCATAAAAAATCTAATTCTCGATGTGCTGGTG CCACTGACCCTGTGGGAGGCCATACTGGCGCTGTGTGTGACATTTAAAGT GTGAGTGCATCTACAGTGGTGTGCTTGAGTGTGGAGGTGGAACCGAGCAT CATGATGAAGTCTCCTAGTGTAGCGTGTTTTGGCGACTGGTGCGTTTGTA TAGGAAGCCCTGAGGATGGGGCACTCAGAGGACATGGAACCACACCTACA ACAGTTTGAATTCTATTTGTTGTGGCATGACTTACACGACACAGCTGCAT GTCCTTGCCCTTGTAATGCTCACAAGCAACGCTTTCCTCCTGTAAACCTC CCCCCTCTTTAGGCCCCTTGCCCCGTCGTCATGTCCTCCCCCACCGCCTG CCCCCTCCCTCAACTCCACCATGCCGCCCTTCCTATCGTGGACTTCTCCA ATACTGACGAGGCTCCGTCAGTTCTGTATAAAGCCTGCAAGGAATTTGGT TTTTTTTACCTCGTCAATCACGGCGTGCCCCAGAGCCTTATCGACGACAT GTTGGCCCAGTCCAAGGTATTTGCACGAAACGGCTAGCCTTTTCGACCTG CCCTCAATTTGTTCCACCCTTTCATTGTCATATCAGTTCCATTCCTTCTC CCGTTTATCATCTATCACGCCACTCAAATCACCACTCCCTCCCTCCCTCC ACTTCCCCCCTCCCCGATTGACCAATCACAGGCCTTCTTTTCCCTTCCCC TCTCCGCCAAAAAAGAGCTCTCCGCCTCCCTCAACAAAATAAATCGCGGT TATACGGGCTTTGAAGAAGAGACCCTCGATCCGGCATTGCAGAAAGGAAA GGGGGACACGAAAGAAGGTTATTATATAGGGAGGGAAGTCCCAGCGGAGA GCGAGGAGGCCAAGGCGTTTCCTCTGCACGGACCCAACGTCTGGCCGGCA AAGGAAGTGCTCCCGTTATGGAGAGGTACAGAAAAGGGGCGAAAATGAAG AGGGATGGGAACAAAAAGACGGAATTAATGGGAGAAGAGGATGTCACAAG TGGAAGGGGAAGGGATGACTTACTCACACCCTTCTCCTTCCTATCGCCAG CTTTCCTCTCGTAAGGAAGGCAAAAAAATCGCCCATTCAAATCTGACATA TGCCTTTCCATTAATCTTTCTCTCGCACCTTCGCCCTCTTCTCCTCAGAT ACCATGACCTCGTATTTCGCAGCGCTCTCCTCCCTGGGGCTCCAGACCGT CCACCTTCTCCTTCGCTCCCTCCATCTTCCCGAAAGCGCTTTTGATGCCA ATTTTACGCGCCCCATGGCCGCCTTGCGATTGTTGCATTACTCACCTCAG GTAACAAGCCCCTTCTCCCTCCCTGCTTCCCTCCCTCCGTCCCTGCTATA GTCTTTCAAACGTTTTAGTAAACCATCTGACCTGAGCTCTCCTCCTGCTA ATAATACCCTTCCCACCCTCCCTCCCTCTCTCCTTCCCTTCCTCTCTCCG TCCTATCAGGCCTCTAACCCGTCTGAAGGCATCTTTGCCGCAGGTGCCCA CTCGGACTACGGTATGTTCACCTTCCTGATCACTGACGGGACGCCTGGGC TGCAGGTCTGGAGGGAGGGAAGGAAGGAGGGAGGGAGGGATGGAGGGGGC ATATGGCAGGATGTACCGGCGGTAGAGGGGGCGTTCATTGTGAATCTAGG CGATATGCTCCAGCGCTGGACCAACGATGTGTTTCGATCCACCAAGCACC GGGTACTGATCAAGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGT TATAGTGCCCCTTTCTTTTATGAGCCGAATTTTGATACGCTTGTGGAGTG CTTGCCCGGGTTCGAGGGGGAGAAGGGGGAAAGACGATATGCACCAGTTA AAAGTGGGGAGTATCTACTCGGGAAGTACCGACAGACCCACAAGGACTTC GTGGAGGGGAAGCCGAAGCCGAAGCAGGAGGAGGAGGGGGGAGGAGAGGG AGGGGGGAAATAA
back to top

Coding sequence (CDS) from alignment at chr15:136164..141276+

>NO15G00400.1 ID=NO15G00400.1|Name=NO15G00400.1|organism=Nannochloropsis oceanica|type=CDS|length=1647bp|location=Sequence derived from alignment at chr15:136164..141276+ (Nannochloropsis oceanica)
ATGGCGGACCCCGAGCCAGGGGAGGGGAATGGGGAGGAAGGAGAAAGGGT
GGGAATGGTCGAGGGAGGGGAGAGGGTAGCGAAGGTGGAGGGGGAGGGAG
AAGGAGAGGGAGACGAGGGAAGGGACGGGAGAAGGGAGGGAGGAAAGGTG
AAAGAGGAGGGCGATGCAGTGCTGGGAGGAATGGGAGTAAGGCCTTTCTA
CATCGATAGGCCCGGGAGCTGTGAGAAGGAGAGGGCGAGAGAAGGGGGGG
AGGGAAGGAGGGAGGGAGGGGGGGAAGAAATTGTGGCGTTCCGACAATTG
GTACGTGTCGATGTAGGCGCCTTGGGGCAATTGAAACAGGAGGAGGAGGG
AGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGGATGAAGAGGAATATTCTGGAAGGAGTAGTGGACTTCGCG
GTGCAATCCTGGAGGGCCTGGCGCCGTAACGTATTTGCCGTTCGACCGTT
GGGCGCAACGCCGATGGGATGCGGCTGCACTGTTTCAGAAAGGGCCCCTT
GCCCCGTCGTCATGTCCTCCCCCACCGCCTGCCCCCTCCCTCAACTCCAC
CATGCCGCCCTTCCTATCGTGGACTTCTCCAATACTGACGAGGCTCCGTC
AGTTCTGTATAAAGCCTGCAAGGAATTTGGTTTTTTTTACCTCGTCAATC
ACGGCGTGCCCCAGAGCCTTATCGACGACATGTTGGCCCAGTCCAAGGCC
TTCTTTTCCCTTCCCCTCTCCGCCAAAAAAGAGCTCTCCGCCTCCCTCAA
CAAAATAAATCGCGGTTATACGGGCTTTGAAGAAGAGACCCTCGATCCGG
CATTGCAGAAAGGAAAGGGGGACACGAAAGAAGGTTATTATATAGGGAGG
GAAGTCCCAGCGGAGAGCGAGGAGGCCAAGGCGTTTCCTCTGCACGGACC
CAACGTCTGGCCGGCAAAGGAAGTGCTCCCGTTATGGAGAGATACCATGA
CCTCGTATTTCGCAGCGCTCTCCTCCCTGGGGCTCCAGACCGTCCACCTT
CTCCTTCGCTCCCTCCATCTTCCCGAAAGCGCTTTTGATGCCAATTTTAC
GCGCCCCATGGCCGCCTTGCGATTGTTGCATTACTCACCTCAGGCCTCTA
ACCCGTCTGAAGGCATCTTTGCCGCAGGTGCCCACTCGGACTACGGTATG
TTCACCTTCCTGATCACTGACGGGACGCCTGGGCTGCAGGTCTGGAGGGA
GGGAAGGAAGGAGGGAGGGAGGGATGGAGGGGGCATATGGCAGGATGTAC
CGGCGGTAGAGGGGGCGTTCATTGTGAATCTAGGCGATATGCTCCAGCGC
TGGACCAACGATGTGTTTCGATCCACCAAGCACCGGGTACTGATCAAGGG
GGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGTTATAGTGCCCCTTTCT
TTTATGAGCCGAATTTTGATACGCTTGTGGAGTGCTTGCCCGGGTTCGAG
GGGGAGAAGGGGGAAAGACGATATGCACCAGTTAAAAGTGGGGAGTATCT
ACTCGGGAAGTACCGACAGACCCACAAGGACTTCGTGGAGGGGAAGCCGA
AGCCGAAGCAGGAGGAGGAGGGGGGAGGAGAGGGAGGGGGGAAATAA
back to top
Synonyms
Publications