NO15G00250.3, NO15G00250.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G00250.3
Unique Name	NO15G00250.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2785
Alignment location	chr15:67655..73076 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:67655..73076 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G00250.3 vs.
Match: CBJ27105.1 (dhm exonuclease [Ectocarpus siliculosus])

HSP 1 Score: 652.5 bits (1682), Expect = 1.300e-183
Identity = 324/592 (54.73%), Postives = 424/592 (71.62%), Query Frame = 0

Query:   25 SLFLGVASFVLLSLVTCTHAFVRSSMPSLAAAGLRQGRQSLPSPFSTPSFHRDGVVVMGIPKLFRWLVDLYPSVQQRVSETLGTETAKVDNFYLDMNGIIHMCTHANAEELILLDERKMFQRIFTYTDRLYKIVAPTRAMFLAIDGVAPRAKMNQQRSRRFRSSKDQEALMAEMVAAGMEIMDDADRFDSNIITPGTDFMYRLGLAFRKWVDFKMETDPFWKNGARVVFSGPDVPGEGEHKIMDYIRNSRKNEDDWRPMMRHCMYGLDADLIMLSLLTHEPSFFLLREKMSTRKGSKRK-KDPSHYSKEDFETLEIGMLREMLRLQFKPLKFHPTFGPRFDLERVIDDFILICMFVGNDFLPHLPHMDIADGALNMMMAVYREAVPNLLGGYITDKAKVHHGRLELFLREISRREPLYFQYRAKEDKDPLWQGDG-YKDYYYQSKLGIGPGESEEAREARRAVARSYLEGLYWVLTYYHEGV---RSWGWYFPYHYAPLASDLVDLPSVNITFAKGRPYTPLMQLLNVLPSQSGPMLPEPYRDLMTQEDSPLRQFYPPDFETDRNGKQNSWESVVLIPFIDEDLMVSALAQV 612
            S+ LG  S + +S    + A   S +   A + +R+GR         P       + MGIPKLFRWL D YP + QR+ + L   TA +DN YLDMNG+IHMCTH N +E I L+E++MF+RIF +TDR++K+V P R ++LA+DG APRAKMNQQRSRRFRSSK+ E  MAEMV    ++  +  RFDSN ITPGTDFM++L  AF+ W+++KM+TDPFW+  ARVVFSGPDVPGEGEHK+MDYIR +R+ E DWR  +RHC+YGLDADLIMLSL+THE  F LLREKMS R   ++K KDP  Y++ DFE +E+ +LREMLRLQF+     P    +F+LERVIDDF+ +C+ VGNDFLP++PH+DI+DGALN MM +Y+  +P + GGY+T K ++HHGRLE+F+ E+SRRE +YF+ R  E+ D + Q  G Y D YY++KL + P + EE    +RAV + YLEGLYWVL YYH GV    SW WY+P+ YAPLAS + +L  ++I+F KGRP+  L+QLL+VLP QS   LPEPY+ LM +  SP+ ++YP +FE D NGK  SWE+VV IPFIDE  +  AL+ V
Sbjct:   81 SMGLGSGSAIGISSGRSSFAGSSSCVVGAAQSSIRRGRSRAAGGAGEP-------LRMGIPKLFRWLTDQYPVISQRLDQGLNEHTAPIDNLYLDMNGVIHMCTHHNDDEFIELNEKEMFRRIFIFTDRMFKLVRPRRLLYLAVDGTAPRAKMNQQRSRRFRSSKEAEVNMAEMVMRDGKL-PEVTRFDSNCITPGTDFMFKLTKAFQAWIEYKMDTDPFWQQNARVVFSGPDVPGEGEHKVMDYIREARETEPDWRDDLRHCLYGLDADLIMLSLVTHEKHFSLLREKMSVRHSRRKKPKDPITYTRNDFELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVGNDFLPNVPHLDISDGALNHMMNMYKLLLPKM-GGYLTKKDQIHHGRLEMFMHEVSRREAMYFRRRGVEESDLVLQDPGKYTDRYYKTKLDLDPEQEEE----KRAVVKHYLEGLYWVLKYYHVGVDAGGSWSWYYPHLYAPLASSMKNLMDIDISFEKGRPFPNLLQLLSVLPPQSADFLPEPYKALMVEPTSPILEYYPTEFECDANGKTASWETVVKIPFIDEKDVFGALSNV 659

The following BLAST results are available for this feature:

BLAST of NO15G00250.3 vs.

BLAST of NO15G00250.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ27105.1	1.300e-183	54.73	dhm exonuclease [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G00250	NO15G00250	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00250.3	NO15G00250.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G00250.3.cds1	NO15G00250.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds2	NO15G00250.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds3	NO15G00250.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds4	NO15G00250.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds5	NO15G00250.3.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds6	NO15G00250.3.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds7	NO15G00250.3.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds8	NO15G00250.3.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds9	NO15G00250.3.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds10	NO15G00250.3.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds11	NO15G00250.3.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds12	NO15G00250.3.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds13	NO15G00250.3.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds14	NO15G00250.3.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds15	NO15G00250.3.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G00250.3.cds16	NO15G00250.3.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:67655..73076+
coding sequence from alignment at chr15:67655..73076+

mRNA sequence

>NO15G00250.3 ID=NO15G00250.3|Name=NO15G00250.3|organism=Nannochloropsis oceanica|type=mRNA|length=2785bp
CATTAATTATGGGAGCGTGTTTTGTTGAGTTTGGCGATGCTTGAACGGCA
ACCAGGACACAGCATTTGCTCTTGTTACTATCAGCTTGTTTTACCACACA
ATATGCCCATCACACAACAGCACCATTGCAGTGTCAACACCATGCACATT
TGTGGATATCCCTGGGCGTGTATCCGCGCTTTGAGGCTACCTGACCAAGG
ACACTCCATTCGCCATTCATCATAAACTTTCTAGTATCCATCGAGGAATT
TCTATACCACACCACCACCACCACAGGCAAACCCACTATGGACACGCCTA
GGAGGACTAGGAGAAGACCTCCGCCGACGTCAGGCCGGTGCAACGACGGC
AGCCGTCTCTCCCTTTTTCTGGGGGTAGCCTCTTTTGTCCTGTTGTCGCT
CGTCACCTGCACGCACGCCTTCGTGCGCTCCTCCATGCCGTCGCTGGCAG
CTGCAGGCTTGCGACAGGGCCGACAAAGCCTCCCCTCCCCCTTCTCGACC
CCTTCCTTCCACCGTGACGGCGTGGTAGTCATGGGCATTCCTAAACTCTT
CAGGTGGCTCGTCGACCTCTACCCCTCCGTGCAGCAACGCGTGAGTGAGA
CCCTAGGCACGGAAACGGCCAAAGTGGATAATTTCTACCTCGACATGAAT
GGCATCATCCACATGTGCACACACGCCAATGCGGAGGAATTGATCCTTCT
GGATGAACGGAAGATGTTTCAGAGAATCTTCACCTATACCGATCGGCTAT
ACAAGATTGTGGCGCCCACCCGCGCCATGTTCCTGGCCATTGACGGAGTG
GCGCCTCGGGCCAAAATGAACCAGCAGCGGTCTCGTCGCTTCCGGTCGAG
CAAGGACCAGGAGGCCCTTATGGCCGAGATGGTGGCAGCCGGCATGGAGA
TCATGGACGACGCTGACCGCTTTGACTCCAACATCATCACGCCTGGTACT
GACTTTATGTATCGCCTAGGCTTGGCCTTTCGGAAATGGGTGGATTTCAA
AATGGAGACCGACCCATTCTGGAAGAACGGCGCCCGAGTCGTGTTTTCAG
GTCCGGATGTACCAGGCGAGGGGGAACATAAAATCATGGACTACATCAGG
AATTCACGGAAGAATGAGGACGACTGGCGGCCCATGATGCGTCACTGCAT
GTATGGGCTTGACGCAGATTTAATCATGCTCTCCCTTCTAACCCACGAAC
CGTCCTTCTTCCTCCTGCGGGAGAAGATGAGTACACGCAAGGGCTCGAAG
CGGAAGAAGGATCCGTCGCACTATAGCAAGGAGGATTTTGAGACGCTGGA
AATCGGCATGCTCCGTGAGATGCTGCGGCTGCAGTTTAAACCCCTCAAAT
TCCACCCGACGTTTGGCCCTCGCTTCGACCTGGAGAGGGTTATCGATGAC
TTTATCCTCATCTGCATGTTCGTGGGAAATGACTTCCTCCCCCATCTCCC
GCATATGGATATTGCAGATGGCGCCTTGAATATGATGATGGCCGTGTATC
GCGAGGCTGTGCCCAATTTGTTGGGGGGCTATATCACCGATAAGGCCAAG
GTCCACCACGGCCGTCTCGAGCTTTTCCTCCGTGAAATCTCCCGGCGCGA
GCCTCTTTATTTCCAATATCGAGCCAAGGAGGACAAGGATCCATTGTGGC
AGGGCGACGGGTACAAAGACTACTACTACCAATCCAAGCTAGGAATAGGA
CCAGGAGAGAGCGAGGAAGCGAGGGAGGCACGGAGGGCGGTGGCGCGAAG
CTATCTCGAAGGACTCTATTGGGTCCTGACGTACTACCACGAGGGTGTAC
GGTCCTGGGGTTGGTATTTCCCTTATCACTACGCGCCTCTGGCCTCCGAC
CTTGTAGACCTCCCAAGCGTGAACATCACCTTCGCCAAAGGGCGTCCATA
CACCCCCCTTATGCAGCTCCTTAACGTCCTTCCATCCCAATCCGGGCCCA
TGCTCCCCGAGCCCTACCGTGATCTGATGACCCAGGAAGACAGCCCCCTC
CGTCAATTTTATCCGCCCGACTTCGAGACGGATCGGAACGGGAAACAAAA
CTCATGGGAGAGCGTGGTCCTTATTCCCTTCATCGACGAGGACTTGATGG
TCTCCGCCTTGGCCCAGGTAAGCGAGGGAGGAAGCGGGGGAGCGGGGGAT
TGAAGGCAGAGGGAAGGCAGAGGTAGCCGTTCACTGCCCTTTCTCGCCTG
CTGCTCTAACGGCCGACGTTTCTTCTTCTCCCTGTTCCCTGTCACTGCTC
CACCCGACTGACTCACCAGGTCGACCATCGCGCTGCCTTGTCTCAGGAGG
AACGTGCACGGAACATCCTCGGGAAGGAGCACACGTTCTGGCCGGCAAAA
GGGTGAGTGGCTAGACGTGGAACCAGTGACCAACAAGCCTATATTTTCCT
CTGCATATATATTGCGTGTGTACGTACCTGTCAATTTTTTCAACTTTTTT
TCGCCCATAACATTGACTGGCTTGTCAACATCAAGACGGGACTGGACAAA
CAAAAAATACACACTCCCTACCTCCATCAGGCGTGGGCCCCCCATAGGGA
AGCAGTTGAAGGGTATTACGGCGGCATCGAGAGCTGGGAGAAAACAGCAT
GCCGATAGAGGCGTTCCCCAAGAGATAGTCGAGCCTGATTTGGACGATTA
GACATGGAGGGGAGGATGATCGTCGTGCCTGCTTATACCATCTGCTTGGC
TCCGAATCGAATTTATTCTCTACAAACGAAGCCAAAGAAAGAAAATGCAA
ACAAAAGGCGACCGGCGAAGAATCAATAAGATGAA

protein sequence of NO15G00250.3

>NO15G00250.3-protein ID=NO15G00250.3-protein|Name=NO15G00250.3|organism=Nannochloropsis oceanica|type=polypeptide|length=622bp
MDTPRRTRRRPPPTSGRCNDGSRLSLFLGVASFVLLSLVTCTHAFVRSSM
PSLAAAGLRQGRQSLPSPFSTPSFHRDGVVVMGIPKLFRWLVDLYPSVQQ
RVSETLGTETAKVDNFYLDMNGIIHMCTHANAEELILLDERKMFQRIFTY
TDRLYKIVAPTRAMFLAIDGVAPRAKMNQQRSRRFRSSKDQEALMAEMVA
AGMEIMDDADRFDSNIITPGTDFMYRLGLAFRKWVDFKMETDPFWKNGAR
VVFSGPDVPGEGEHKIMDYIRNSRKNEDDWRPMMRHCMYGLDADLIMLSL
LTHEPSFFLLREKMSTRKGSKRKKDPSHYSKEDFETLEIGMLREMLRLQF
KPLKFHPTFGPRFDLERVIDDFILICMFVGNDFLPHLPHMDIADGALNMM
MAVYREAVPNLLGGYITDKAKVHHGRLELFLREISRREPLYFQYRAKEDK
DPLWQGDGYKDYYYQSKLGIGPGESEEAREARRAVARSYLEGLYWVLTYY
HEGVRSWGWYFPYHYAPLASDLVDLPSVNITFAKGRPYTPLMQLLNVLPS
QSGPMLPEPYRDLMTQEDSPLRQFYPPDFETDRNGKQNSWESVVLIPFID
EDLMVSALAQVSEGGSGGAGD*

mRNA from alignment at chr15:67655..73076+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G00250.3 ID=NO15G00250.3|Name=NO15G00250.3|organism=Nannochloropsis oceanica|type=mRNA|length=5422bp|location=Sequence derived from alignment at chr15:67655..73076+ (Nannochloropsis oceanica)
CATTAATTATGGGAGCGTGTTTTGTTGAGTTTGGCGATGCTTGAACGGCA
ACCAGGACACAGCATTTGCTCTTGTTACTATCAGCTTGTTTTACCACACA
ATATGCCCATCACACAACAGCACCATTGCAGTGTCAACACCATGCACATT
TGTGGATATCCCTGGGCGTGTATCCGCGCTTTGAGGCTACCTGACCAAGG
ACACTCCATTCGCCATTCATCATAAACTTTCTAGTATCCATCGAGGAATT
TCTATACCACACCACCACCACCACAGGCAAACCCACTATGGACACGCCTA
GGAGGACTAGGAGAAGACCTCCGCCGACGTCAGGCCGGTGCAACGACGGC
AGCCGTCTCTCCCTTTTTCTGGGGGTAGCCTCTTTTGTCCTGTTGTCGCT
CGTCACCTGCACGCACGCCTTCGTGCGCTCCTCCATGCCGTCGCTGGCAG
CTGCAGGCTTGCGACAGGGCCGACAAAGGTGCGCATAGATTAAGGGGGGG
AAAAGATGGAGCAGTAAAAGGGGGAAAATGAAAGGGAGAGAATGAAGGGA
AGAGAGGCTGGCCACAGCCGGTGTTTCACGCACACTCACTCCACCCCACC
CTTCCCTCCCCCCTCAGCCTCCCCTCCCCCTTCTCGACCCCTTCCTTCCA
CCGTGACGGCGTGGTAGTCATGGGCATTCCTAAACTCTTCAGGTGGCTCG
TCGACCTCTACCCCTCCGTGCAGCAACGCGTGAGTGAGACCCTAGGCACG
GAAACGGCCAAAGTGGATAATTTCTACCTCGACATGAATGGCATCATCCA
CATGTGCACACACGCCAATGCGGAGGAATTGATCCTTCTGGATGAACGGA
AGATGTTTCAGAGAATCTTCACCTATACCGATCGGCTATACAAGATTGTG
GCGCCCACCCGCGTAAGGAGGGAAGGAAGGAATGAGGGAGGGAGGGAGGC
CTATGTAGTTGAAGTCTGTCAGATGAAAGACGTGATCCCTTGACTTTTCC
CTCCCTCCCTCCATCCATCCCTCCTCCCCTCCCCCTCTCCCTCCCTCTCT
CACAGGCCATGTTCCTGGCCATTGACGGAGTGGCGCCTCGGGCCAAAATG
AACCAGCAGCGGTCTCGTCGCTTCCGGTAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAAGGGCGGGGGCCTTGGCGACTTCCGCCCCGCGATCAGCC
AACCGACGACATGCCTGCACTCCCTCCTTCTCTCCTCCCCGCAGGTCGAG
CAAGGACCAGGAGGCCCTTATGGCCGAGATGGTGGCAGCCGGCATGGAGA
TCATGGACGACGCTGACCGGTATGTCCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCTTCCCTCCTCTTCCCTGACTCGACTCACCCACCTCCTCCCTCCC
TCCTTGCCTTCCTCTTCCCCCTCTTCCTCAGCTTTGACTCCAACATCATC
ACGCCTGGTACTGACTTTATGTATCGCCTAGGCTTGGCCTTTCGGAAATG
GGTGGATTTCAAAATGGAGACCGACCCATTCTGGAAGGTGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGAGAGGGACGC
ATTGGCGAGTGTGGAGAGATAATGCGAACATTGACTTAATTATATCGCTT
TTCTGAATTTTTTGAATTTTTTTCAATCGTAATTTAAATTTTTTGTTATT
TTTTTTTTTAATTCATTTCTTTTATTACGAATTTGTTTACTTAATTTATT
TAAATTATATTACAATTTCACAGAACGGCGCCCGAGTCGTGTTTTCAGGT
CCGGATGTACCAGGCGAGGGGGAACATAAAATCATGGACTACATCAGGTG
AGGAGGAGGGAGGGAGGAAGGAACGAAGGGAGGGGGGGAGGGAGGGAGAC
GTGTACGATAGAGGAGATAGGGCGGGAGGGAGGGAGGGAGAGGTAGGGGA
AGATGCTTATTTACTCTCTCCTGCAAATACCACAGGAATTCACGGAAGAA
TGAGGACGACTGGCGGCCCATGATGCGTCACTGTGAGTGCCCTCCCTCCC
TCCCTCCCAACTACCTTTCCTCCCTCCTCCTCACCTGATGTAGTCCATGA
TTTTATGTTCCCCCTCGCCTGGTACATCCGGACCTGAAAACACAACTCGG
TCGCCGTTCTGTGAAATTGCAATATAATTTAAATTAAATAGACAAATTAG
TAACAATAAAATGTTGTCTCCCTCCCTGTAACCATCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCTTCTAACCTTA
CATCTAAGGCATGTATGGGCTTGACGCAGATTTAATCATGCTCTCCCTTC
TAACCCACGAACCGTCCTTCTTCCTCCTGCGGGAGAAGATGAGTACACGC
AAGGTGAGAGGAGGAAGGAGACGGAGACGGCAAAGGGGGCTGAGGAAGAG
GAGGGAGGGTGGGAGGGAGGGTGGGAGGGTGGGAGGGGGGGAGGGAGGGA
GGGAGGGAGGGAGGGTGGGAGGGGAGGAAGGAATTGTGAGAGGGCTGGGT
GAAGGGAGGGAGAGAGTGAAGGAGGGAAGGAGGGAGTCCTTCAGGTGCTC
TAACACGTGTCCCATGGCCATATGTCATACACTTTTTCTTGGCATTTTTT
CTTGATACATTTGATAGGGCTCGAAGCGGAAGAAGGATCCGTCGCACTAT
AGCAAGGAGGATTTTGAGACGCTGGAAATCGGTGAGTGGAGGGAGGGAGA
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGGGC
GAACGCTGTCGTCCATGATGCCTCTAGCCTCGTGGTATGCTGACCTCCTT
TCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCATCCATCCCTCCCTC
CATCCCTCCCTCAGGCATGCTCCGTGAGATGCTGCGGCTGCAGTTTAAAC
CCCTCAAATTCCACCCGACGTTTGGCCCTCGCTTCGACCTGGAGAGGGTT
ATCGATGACTTTATCCTCATCTGCATGTTCGTGGGAAATGACTTCCTCCC
CCATCTCCCGCATATGGATATTGCAGATGGTGCGCCCGCCCTCCCTGTCC
TCCCTCCCTCCCTCCCTCCACGCCTCCCTCCCTCCCTCCTCCATGTGTCC
GGCCGGCGATTTACCCTGGTGGCACTTGCAGCACTTACCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCAGGCGCCTTGA
ATATGATGATGGCCGTGTATCGCGAGGCTGTGCCCAATTTGTTGGGGGGC
TATATCACCGATAAGGCCAAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAAGGAGGGGGGGAGGGAGGGAAGGAGGGAGGGGGGAGGGAG
GGAAGGAGGGAGGGAGGGAAGGAGGGAGGAATGGAGGAAAAGAGGAAAGG
AGGAAGAGAGGCCTCCATACATTTCTCTGCGTACTTCTCCTCACATCGAT
GAACCCACCCTCCTTCCCGCCTTCCTTCCCTCCCTCCCTCCCTTCCTCCC
GTAGGTCCACCACGGCCGTCTCGAGCTTTTCCTCCGTGAAATCTCCCGGC
GCGAGCCTCTTTATTTCCAATATCGAGCCAAGGAGGACAAGGATCCATTG
TGGCAGGTAAGGAGATAGCGACGGAGGGAGAGAGGGAGGGAGGATGGGAG
GGAAGGAGGGAGGGAAGGAGGGGCGGACTCTGTGTTTCCCGAGACGCCCA
CGTCACAGACTGATGGTGCCTTTCTCTCTAAGATTCACCTCTCCCTTTCC
CCCCTCCCTCCCTCCCTCCCCCCTCCCCCCCTCCTTCAGGGCGACGGGTA
CAAAGACTACTACTACCAATCCAAGCTAGGAATAGGACCAGGAGAGAGCG
AGGAAGCGAGGGAGGCACGGAGGGCGGTGGCGCGAAGCTATCTCGAAGGA
CTCTATTGGGTCCTGACGTACTACCACGAGGGTGTACGGTAAGGAGGGAG
GGAGGGAGGGCACTTGATGAGTATATGCTCCCGGGTCTTGTTTGCTTGTA
CTTGTGAGTTGATTATTATTATTACTCAACAGCCCTCCCTCCCCCCCTCC
CTTCCTCCCTCCTTGAACAGGTCCTGGGGTTGGTATTTCCCTTATCACTA
CGCGCCTCTGGCCTCCGACCTTGTAGACCTCCCAAGGTACGGAGCAAAGC
AACGAAGGAGGGAGGAAGGTGTAAAGCACAGAAGGCATTTGTGAAGAGGG
AGGAAAGGAAATCCTGCCGCTAACTCTCCCAATTTCTTCCCGCCCCTCCT
CCATCCCTCCATCCTCCCTCCCCTCCCAGCGTGAACATCACCTTCGCCAA
AGGGCGTCCATACACCCCCCTTATGCAGCTCCTTAACGTCCTTCCATCCC
AATCCGGGCCCATGCTCCCCGAGCCCTACCGTGATCTGATGGTGTGGAGG
GAGGGAGAAAGGGAGGGGGGAGGGAGGGAGGGAGGAGTCGGCGGGGGTTG
TAATGCTGCGTCTGCGTTCCCCTTCAGGCTGGCATTTTATGTTTCACACA
GTTTTCTTCCTTCTCCCTCTCCCTCCCTCCCTCCCTCCTTCCCTGCCTCC
TTCCCTCCCTCCCCAGACCCAGGAAGACAGCCCCCTCCGTCAATTTTATC
CGCCCGACTTCGAGACGGATCGGAACGGGAAACAAAACTCATGGGAGAGC
GTGGTCCTTATTCCCTTCATCGACGAGGACTTGATGGTCTCCGCCTTGGC
CCAGGTAAGCGAGGGAGGAAGCGGGGGAGCGGGGGATTGAAGGCAGAGGG
AAGGCAGAGGTAGCCGTTCACTGCCCTTTCTCGCCTGCTGCTCTAACGGC
CGACGTTTCTTCTTCTCCCTGTTCCCTGTCACTGCTCCACCCGACTGACT
CACCAGGTCGACCATCGCGCTGCCTTGTCTCAGGAGGAACGTGCACGGAA
CATCCTCGGGAAGGAGCACACGTTCTGGCCGGCAAAAGGGTGAGTGGCTA
GACGTGGAACCAGTGACCAACAAGCCTATATTTTCCTCTGCATATATATT
GCGTGTGTACGTACCTGTCAATTTTTTCAACTTTTTTTCGCCCATAACAT
TGACTGGCTTGTCAACATCAAGACGGGACTGGACAAACAAAAAATACACA
CTCCCTACCTCCATCAGGCGTGGGCCCCCCATAGGGAAGCAGTTGAAGGG
TATTACGGCGGCATCGAGAGCTGGGAGAAAACAGCATGCCGATAGAGGCG
TTCCCCAAGAGATAGTCGAGCCTGATTTGGACGATTAGACATGGAGGGGA
GGATGATCGTCGTGCCTGCTTATACCATCTGCTTGGCTCCGAATCGAATT
TATTCTCTACAAACGAAGCCAAAGAAAGAAAATGCAAACAAAAGGCGACC
GGCGAAGAATCAATAAGATGAA

Coding sequence (CDS) from alignment at chr15:67655..73076+

>NO15G00250.3 ID=NO15G00250.3|Name=NO15G00250.3|organism=Nannochloropsis oceanica|type=CDS|length=1866bp|location=Sequence derived from alignment at chr15:67655..73076+ (Nannochloropsis oceanica)
ATGGACACGCCTAGGAGGACTAGGAGAAGACCTCCGCCGACGTCAGGCCG
GTGCAACGACGGCAGCCGTCTCTCCCTTTTTCTGGGGGTAGCCTCTTTTG
TCCTGTTGTCGCTCGTCACCTGCACGCACGCCTTCGTGCGCTCCTCCATG
CCGTCGCTGGCAGCTGCAGGCTTGCGACAGGGCCGACAAAGCCTCCCCTC
CCCCTTCTCGACCCCTTCCTTCCACCGTGACGGCGTGGTAGTCATGGGCA
TTCCTAAACTCTTCAGGTGGCTCGTCGACCTCTACCCCTCCGTGCAGCAA
CGCGTGAGTGAGACCCTAGGCACGGAAACGGCCAAAGTGGATAATTTCTA
CCTCGACATGAATGGCATCATCCACATGTGCACACACGCCAATGCGGAGG
AATTGATCCTTCTGGATGAACGGAAGATGTTTCAGAGAATCTTCACCTAT
ACCGATCGGCTATACAAGATTGTGGCGCCCACCCGCGCCATGTTCCTGGC
CATTGACGGAGTGGCGCCTCGGGCCAAAATGAACCAGCAGCGGTCTCGTC
GCTTCCGGTCGAGCAAGGACCAGGAGGCCCTTATGGCCGAGATGGTGGCA
GCCGGCATGGAGATCATGGACGACGCTGACCGCTTTGACTCCAACATCAT
CACGCCTGGTACTGACTTTATGTATCGCCTAGGCTTGGCCTTTCGGAAAT
GGGTGGATTTCAAAATGGAGACCGACCCATTCTGGAAGAACGGCGCCCGA
GTCGTGTTTTCAGGTCCGGATGTACCAGGCGAGGGGGAACATAAAATCAT
GGACTACATCAGGAATTCACGGAAGAATGAGGACGACTGGCGGCCCATGA
TGCGTCACTGCATGTATGGGCTTGACGCAGATTTAATCATGCTCTCCCTT
CTAACCCACGAACCGTCCTTCTTCCTCCTGCGGGAGAAGATGAGTACACG
CAAGGGCTCGAAGCGGAAGAAGGATCCGTCGCACTATAGCAAGGAGGATT
TTGAGACGCTGGAAATCGGCATGCTCCGTGAGATGCTGCGGCTGCAGTTT
AAACCCCTCAAATTCCACCCGACGTTTGGCCCTCGCTTCGACCTGGAGAG
GGTTATCGATGACTTTATCCTCATCTGCATGTTCGTGGGAAATGACTTCC
TCCCCCATCTCCCGCATATGGATATTGCAGATGGCGCCTTGAATATGATG
ATGGCCGTGTATCGCGAGGCTGTGCCCAATTTGTTGGGGGGCTATATCAC
CGATAAGGCCAAGGTCCACCACGGCCGTCTCGAGCTTTTCCTCCGTGAAA
TCTCCCGGCGCGAGCCTCTTTATTTCCAATATCGAGCCAAGGAGGACAAG
GATCCATTGTGGCAGGGCGACGGGTACAAAGACTACTACTACCAATCCAA
GCTAGGAATAGGACCAGGAGAGAGCGAGGAAGCGAGGGAGGCACGGAGGG
CGGTGGCGCGAAGCTATCTCGAAGGACTCTATTGGGTCCTGACGTACTAC
CACGAGGGTGTACGGTCCTGGGGTTGGTATTTCCCTTATCACTACGCGCC
TCTGGCCTCCGACCTTGTAGACCTCCCAAGCGTGAACATCACCTTCGCCA
AAGGGCGTCCATACACCCCCCTTATGCAGCTCCTTAACGTCCTTCCATCC
CAATCCGGGCCCATGCTCCCCGAGCCCTACCGTGATCTGATGACCCAGGA
AGACAGCCCCCTCCGTCAATTTTATCCGCCCGACTTCGAGACGGATCGGA
ACGGGAAACAAAACTCATGGGAGAGCGTGGTCCTTATTCCCTTCATCGAC
GAGGACTTGATGGTCTCCGCCTTGGCCCAGGTAAGCGAGGGAGGAAGCGG
GGGAGCGGGGGATTGA

Synonyms

Publications