Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr12 genome chr12:1003391..1011522 +
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO12G03650.1 vs.
Match: CBN77232.1 (EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3 subunit c) [Ectocarpus siliculosus])
HSP 1 Score: 664.8 bits (1714), Expect = 4.400e-187
Identity = 473/1067 (44.33%), Postives = 652/1067 (61.11%), Query Frame = 0
Query: 11 GSDDDSSASETEAVVDVGGVEKRQQKRWEVDSDSESEDEVRVVRSAKDKAWDEMKDKVVKIQNALKINDWIIVENEFDDLNKRVEAKRALFGTGAFPKFYIKLCVTLEEKL-VEIRDKAKEGTAKKMSAGNERSFKRMKNKLNKNNKTHEAEIALYKQDPAAYMADEAAMDEVSGSSSSSSSSSSSSSDSSDSDSDSSSSSSSDSDS--DSDSDSSSSSSSSSSSSSSSSSGSSAPIARKKTNKLFDGSD-SDFSDSDESSSSESEAENQLKGRARWLKRAPTGKE--KEKDEKKRQQRIGEVGADGEQIARRKKKVGVEGGAAAAAAARSLLYDQLTLPEYKKKVTEVVASRGRRSTGSAELLRQLQHLAYVGRRFGLAEEAPVVMHLILAMFDTKRAVDEPMHVGLWQQCAAYLQRLLALLEAAPSRVL-KNGTDVADSLVTAMGRTSLAAMPEGGAEGVGEQKGEEEGVARADLDYDAE---IIQVPGSFGYFVTRLADEYTKSLQRINPHTGDYVARLKDEAVLLRLAQGVQAYYTRAASKARRPAVRQTDMAHAAEVAVISIKYIYYKHDSLAAKVAADRAYFEKWGSLASIHPACLGGVAPIPPPPAGGKIDATTMHPAAVSSERPERKEQVDEGEPRNFQKEVAELAIFVYRHGEARQKMLAMLCQIAHHALHDRFHEARNLYLMSHIARDINELEDEMKILFNRTMVQLGLCAFRHGLIHEAHQCLSEICSKRPKELLAQGIARSFHHRDQDPEAEKEERRRQLPYHMHINIDLLELCHLTSAMLLEVPNLATMEGRVDRKRVISGYFRKVLQQYETQAFAGPPEIIRDHILAAASALATGDWRTCRDLVFKPDVWHRIPGPGAVEKVQAMLLEKIKAEGLRTYLFTFSPFYDSLSLPQLCDMFEMERGTAHSIISKMMIYGELHATWDQPTETIVLQRVEASHLQILALQYADRLERLVGANEGMVHLKSG----RGDGEKGQDGDHHGGRGGGRGGG------RGGGRGGGRGGGDGGGGEEGGWNQSGGRGRGRGRG--RGRGRGGGGGYRGGGGF 1056
GS+ DS + ++ GG + ++W VDSDSESE+EVRVV+SAKD++++ ++ V KI+ +KINDW ++ FD+ NK V+ + + P FYIKL LE+ L V ++DK KKMSA N RS RMK +L K+NK +E EIA ++ +P AY A+E++ +E S SS S S SSSS D+S S+ +S S S D DSD DS +SS++ + + +S P+ +K + D D S SDSD S + + LKGRA+WLK+ + K KDEK+ A E ++K K V G AA + L ++ E +KK+ E +ASRGR++T E+LRQL LAY+ RR G E P++M+L+ AMFDT R +DE M +W+ C Y+ R+ LLE+ P L + G +V L+ A G G E E AD+ + E +++V GS ++ RL DEYTKSLQ INPHT +Y+ RLKDE+V++ LA VQAYY R Q +M+ A++A++ +++YY+H+S+A V +++ K+G +HPAC A P + G +D T HP A + E D + +++ L + VY+HG+ R + AMLC I HHALHDRFH AR+L LMSH+ +I++ + +IL+NR MV LGLCAFR GLIH+AH CL ++CS R KELLAQG+ + +D++PE EK ERRRQ PYHMHIN+DLLE CHLTSAMLLEVPN+A E R+RV+S +FR+ + + Q F GPPE IRDH++AAA L GDW+ C DL+ DVW+ IPG G E V+ M+ EKI+ E LRTYLFT+SP Y+SLSLP LC+MF+M++ AHSIISKMM+ EL+ +WDQPTET+VL++ + + LQ+LAL++AD+ LV +NE ++ ++G R DG +G GGRGGGRGGG RGG GGGRG GD GGG G+N+ G R +G GRGRGG GG RG G +
Sbjct: 14 GSESDSDSDSDSSMGGAGGAAGAR-RQWAVDSDSESEEEVRVVKSAKDRSFEAIRTSVGKIRTKIKINDWNGIQTNFDECNKHVDKSKVMIAKEGVPSFYIKLLANLEDLLAVTLKDKP---AIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPDAY-AEESSSEESSSSSDSDSDSSSSDDDASSSEEESDSDSDGDDSDADDSDDDSDASSAAGGGTRGVGEAKASKPVKTQKNLEDMDSDDWSSDSDSDSDSDGSDDDGDMLKGRAKWLKKTDDTSDIKKRKDEKR--------AAKVEDGKKKKDKAVVTAGKEKGAALKLDL--DISSEELEKKLRECLASRGRKATDPKEVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYISRVADLLESRPELTLGQMGNEVVADLIQA---------------GTGVDVDESEV---ADVLAEVEKTGVLKVVGSLSQYMIRLGDEYTKSLQNINPHTQEYIRRLKDESVVVDLAAKVQAYYER-----------QGEMSVVADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAP---SDGALDVTKAHPGAFLGQPSVDHEYAD------YTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMN-RFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMA-QESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILGLDVWNLIPGEGCAELVKVMVKEKIQVEALRTYLFTYSPHYESLSLPTLCEMFDMQKSKAHSIISKMMLSHELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRG------GGRGGGRGGGGRGDSSRGGRDGGGRGSGDWGGGR--GYNRPGQTANNRYQGGQGGRGRGGYGG-RGAGNY 1016
The following BLAST results are available for this feature:
BLAST of NO12G03650.1 vs.
Analysis Date: 2017-10-25 (
Homology annotation for N. oceanica IMET1 )
Total hits: 1
500 1000 1500 2000 2500 3000 Expect = 4.40e-187 / Id = 44.33 Sequence CBN77232.1
Match Name E-value Identity Description
CBN77232.1 4.400e-187 44.33 EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3 ... [more]
back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence
>NO12G03650.1 ID=NO12G03650.1|Name=NO12G03650.1|organism=Nannochloropsis oceanica|type=mRNA|length=3244bp AACACACAGAGAGACAAACCCTACCTACTCAAGCATGAGTCGGCCGGGTG GCAAGCTCTGGCAAGGCTCCGACGATGATTCGAGCGCGTCCGAAACCGAG GCAGTGGTGGACGTGGGTGGGGTGGAGAAGCGCCAACAGAAGAGATGGGA GGTTGATAGCGACTCGGAGTCGGAGGATGAAGTTCGCGTTGTCCGCTCTG CCAAGGACAAGGCCTGGGATGAGATGAAAGATAAGGTGGTCAAGATCCAG AATGCTTTGAAAATCAACGACTGGATCATCGTCGAGAACGAGTTTGATGA CCTCAACAAGCGCGTAGAGGCCAAGCGTGCCCTGTTCGGCACCGGGGCTT TCCCCAAGTTTTATATCAAGCTGTGCGTGACGCTGGAGGAGAAGCTGGTC GAGATCCGTGACAAGGCCAAGGAAGGCACGGCCAAGAAGATGTCGGCGGG AAATGAGCGGTCGTTCAAGCGGATGAAGAATAAATTGAACAAGAACAACA AGACCCACGAGGCGGAGATCGCGCTGTACAAGCAGGACCCTGCGGCCTAC ATGGCCGACGAAGCCGCGATGGATGAGGTGAGCGGCAGCAGTAGTAGCAG CAGCAGCAGCAGCAGCAGCAGCAGCGACAGCAGTGACAGTGACTCCGACT CGTCGTCCTCCTCTTCTTCGGATAGCGATTCGGACAGCGACAGCGACTCC TCCTCCTCCTCCTCGTCTTCCTCCTCTTCCTCCTCCTCCTCCTCTTCCGG CTCCTCGGCGCCTATCGCCCGCAAGAAAACTAATAAGCTCTTCGATGGTT CCGACAGCGACTTCTCCGATTCAGACGAGAGCTCCAGCAGCGAGAGCGAA GCCGAGAACCAGCTCAAGGGCCGAGCCCGATGGTTGAAGAGGGCGCCCAC CGGCAAGGAGAAGGAGAAGGACGAGAAGAAGAGGCAGCAACGCATCGGTG AAGTCGGCGCGGATGGCGAGCAAATCGCGCGGCGTAAGAAGAAGGTCGGC GTGGAGGGAGGGGCGGCTGCTGCTGCCGCTGCCCGAAGCTTGCTCTACGA CCAGCTGACCCTGCCGGAGTACAAGAAGAAGGTGACGGAGGTGGTGGCTT CTCGAGGGCGTCGATCCACAGGGTCGGCGGAGCTGCTGCGGCAGTTGCAG CACCTGGCGTATGTGGGCCGTCGCTTTGGTCTTGCGGAAGAGGCCCCCGT GGTGATGCACTTAATCCTGGCCATGTTCGACACCAAGCGGGCCGTGGACG AGCCGATGCATGTGGGACTGTGGCAGCAATGCGCAGCCTACCTACAGCGA CTCCTCGCATTGCTGGAGGCGGCCCCGTCGAGGGTGTTGAAGAACGGCAC CGATGTGGCGGACTCCTTGGTCACCGCTATGGGAAGAACCAGCCTAGCCG CTATGCCTGAGGGAGGGGCGGAGGGCGTGGGGGAGCAGAAGGGAGAAGAG GAGGGGGTGGCACGGGCGGACCTGGATTACGATGCGGAGATAATTCAGGT GCCTGGATCCTTCGGCTATTTCGTGACGCGACTGGCGGACGAGTACACCA AGTCGTTGCAGCGGATCAATCCGCACACCGGTGATTATGTGGCACGGCTC AAGGACGAGGCCGTCCTCCTCCGCCTCGCCCAGGGGGTCCAAGCCTACTA CACCCGCGCTGCCTCCAAAGCCCGCCGTCCTGCCGTGCGTCAGACTGACA TGGCCCATGCGGCCGAAGTGGCCGTCATCAGCATTAAGTACATCTACTAC AAGCACGACTCCCTCGCGGCCAAGGTGGCGGCCGATCGCGCCTACTTCGA GAAGTGGGGCTCACTCGCCTCTATTCACCCTGCGTGCTTAGGCGGCGTCG CGCCCATCCCTCCTCCCCCTGCCGGTGGGAAGATTGATGCTACCACGATG CACCCCGCCGCCGTCTCCTCCGAACGCCCTGAGCGGAAGGAGCAAGTCGA TGAGGGGGAGCCGCGGAATTTCCAGAAGGAGGTGGCCGAATTGGCGATCT TCGTCTACCGCCACGGCGAGGCCCGTCAGAAGATGCTGGCCATGCTCTGT CAGATCGCGCACCACGCCCTCCACGACCGCTTCCATGAAGCTCGGAACCT CTACCTCATGAGCCACATCGCCCGCGACATCAACGAGCTTGAGGATGAGA TGAAGATCCTGTTCAACCGCACTATGGTCCAGCTCGGGCTGTGCGCCTTC CGCCACGGCCTCATCCACGAGGCCCATCAATGCCTCTCCGAGATCTGCTC CAAGCGTCCCAAGGAGCTGCTGGCCCAAGGCATCGCGCGCTCCTTCCATC ACAGAGATCAAGATCCCGAGGCTGAGAAGGAGGAGCGTCGGCGACAGCTG CCCTACCACATGCACATTAATATCGACCTCCTTGAGCTTTGCCACCTCAC GAGTGCCATGCTCCTTGAGGTGCCCAATCTGGCCACCATGGAGGGGCGTG TGGACCGCAAACGAGTCATTTCAGGTTATTTCCGCAAGGTTTTGCAGCAG TACGAGACGCAAGCCTTTGCAGGCCCACCGGAGATCATCCGCGATCATAT CCTAGCGGCGGCTTCCGCATTAGCCACGGGGGACTGGCGTACCTGCCGTG ATTTGGTCTTCAAGCCGGACGTCTGGCACCGGATCCCAGGACCAGGGGCC GTGGAGAAGGTGCAGGCCATGCTTTTGGAGAAGATTAAGGCTGAGGGCTT ACGTACCTATCTGTTCACGTTCTCGCCGTTTTATGACTCCTTGTCCTTGC CTCAGTTGTGCGACATGTTTGAGATGGAACGTGGCACGGCGCACAGCATC ATCAGTAAAATGATGATCTACGGCGAGCTTCACGCCACCTGGGATCAGCC CACCGAGACGATCGTTCTTCAACGGGTGGAGGCCAGCCATTTGCAGATCC TGGCCCTGCAATACGCTGACAGGCTCGAGAGACTTGTGGGAGCGAATGAG GGGATGGTGCACCTCAAGAGCGGCCGTGGGGATGGAGAGAAAGGGCAAGA CGGCGACCACCACGGAGGAAGAGGGGGAGGACGAGGCGGAGGACGAGGCG GAGGGAGGGGGGGAGGACGAGGGGGAGGGGACGGAGGGGGAGGGGAGGAG GGAGGTTGGAATCAGTCGGGAGGGAGGGGGAGGGGGAGGGGCCGAGGGAG GGGCCGAGGGAGGGGGGGAGGAGGGGGATATCGGGGAGGAGGAGGGTTTG GGGGCGGAGGCGGATTCAATAGCTTTAGATCGGCTGGGTTCTAA back to top protein sequence of NO12G03650.1
>NO12G03650.1-protein ID=NO12G03650.1-protein|Name=NO12G03650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1070bp MSRPGGKLWQGSDDDSSASETEAVVDVGGVEKRQQKRWEVDSDSESEDEV RVVRSAKDKAWDEMKDKVVKIQNALKINDWIIVENEFDDLNKRVEAKRAL FGTGAFPKFYIKLCVTLEEKLVEIRDKAKEGTAKKMSAGNERSFKRMKNK LNKNNKTHEAEIALYKQDPAAYMADEAAMDEVSGSSSSSSSSSSSSSDSS DSDSDSSSSSSSDSDSDSDSDSSSSSSSSSSSSSSSSSGSSAPIARKKTN KLFDGSDSDFSDSDESSSSESEAENQLKGRARWLKRAPTGKEKEKDEKKR QQRIGEVGADGEQIARRKKKVGVEGGAAAAAAARSLLYDQLTLPEYKKKV TEVVASRGRRSTGSAELLRQLQHLAYVGRRFGLAEEAPVVMHLILAMFDT KRAVDEPMHVGLWQQCAAYLQRLLALLEAAPSRVLKNGTDVADSLVTAMG RTSLAAMPEGGAEGVGEQKGEEEGVARADLDYDAEIIQVPGSFGYFVTRL ADEYTKSLQRINPHTGDYVARLKDEAVLLRLAQGVQAYYTRAASKARRPA VRQTDMAHAAEVAVISIKYIYYKHDSLAAKVAADRAYFEKWGSLASIHPA CLGGVAPIPPPPAGGKIDATTMHPAAVSSERPERKEQVDEGEPRNFQKEV AELAIFVYRHGEARQKMLAMLCQIAHHALHDRFHEARNLYLMSHIARDIN ELEDEMKILFNRTMVQLGLCAFRHGLIHEAHQCLSEICSKRPKELLAQGI ARSFHHRDQDPEAEKEERRRQLPYHMHINIDLLELCHLTSAMLLEVPNLA TMEGRVDRKRVISGYFRKVLQQYETQAFAGPPEIIRDHILAAASALATGD WRTCRDLVFKPDVWHRIPGPGAVEKVQAMLLEKIKAEGLRTYLFTFSPFY DSLSLPQLCDMFEMERGTAHSIISKMMIYGELHATWDQPTETIVLQRVEA SHLQILALQYADRLERLVGANEGMVHLKSGRGDGEKGQDGDHHGGRGGGR GGGRGGGRGGGRGGGDGGGGEEGGWNQSGGRGRGRGRGRGRGRGGGGGYR GGGGFGGGGGFNSFRSAGF* back to top mRNA from alignment at chr12:1003391..1011522+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G03650.1 ID=NO12G03650.1|Name=NO12G03650.1|organism=Nannochloropsis oceanica|type=mRNA|length=8132bp|location=Sequence derived from alignment at chr12:1003391..1011522+ (Nannochloropsis oceanica) AACACACAGAGAGACAAACCCTACCTACTCAAGCATGAGTCGGCCGGGTG
GCAAGCTCTGGCAAGGCTCCGACGATGATTCGAGCGCGTCCGAAACCGAG
GCAGTGGTGGACGTGGGTGGGGTGGAGAAGCGCCAACAGAAGAGATGGGA
GGTTGATAGCGACTCGG GTACGTGTGTCTGTGAGGCTTAATTTTCACAGT
AAGCGGAAGAAGAAGAGAAGGGGTGGGGGGAAAAAGTTTGCAATGTAATG
GATCTGTCAGACTTTTTGGTTGGTTGCTCTGAGTCGGAATTGTTTGTGAT
TGGTTAGTCATGTAGTTTCCCCTCTGATTTGGACATACACATGGGCGTGC
TGATAGAGTTTTACCGTGAGGCTCCGTCCTTCGCATATATTTTAATTATG
TGGAATCTCATTATATGATCGGGGAAACGAATAAAACAAGGATATTGCTT
ACTTGGCCAGCGAGACTGACCACCAGCGACGGTGAAAGAGGCACACATCA
ACTCACCTCCTGTCCCTCTCTCCCTCCCTTCCTTCCTCCCTCCTTCCTTC
TTTCTTCTTTTCCTCCCTCCCATCATAAACAGAGTCGGAGGATGAAGTTC
GCGTTGTCCGCTCTGCCAAGGACAAGGCCTGGGATGAGATGAAAGATAAG
GTGCGTACCAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCTTGC
TTGCTTGCTCGCTCGATGATCTGTCTTGTCCTTCCAATCCGTCTCTGACT
CCCTCCCTCCCTCCCTGCCTCCCCCCCTGTTCTAAATCACCAGGTGGTCA
AGATCCAGAATGCTTTGAAAATCAACGACTGGATCATCGTCGAGAACGAG
TTTGATGACCTCAACAAGCGCGTAGAGGCCAAGCG GTAAGCCCCCCTCCT
TCCCTCCCTCCTTCCCTCATTCCCTCCCTCCCTTCCTCTTGCTCTACCTG
CTTCCCTCACGTTCGTCTTATGTATACATCTGTATACGGCATTCAATATC
CTCCGTCCCCATCTCCCCTTCCTCCTCACACTTCGTCCTTTCCTTCTTCC
CCCCGCTCCCTCCCTCCCTTCTGCCTCACCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCAGTGCCCTGTTCGGCACCGGGGCTT
TCCCCAAGTTTTATATCAAGCTGTGCGTGACGCTGGAGGAGAAGCTGGTC
GAGATCCGTGACAAG GTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGAA
GTAATGTCCAGGCGACGGTGTACGGCCAGAGACCTCCAACGATGAAAGGG
ACCTTGTGCATCTTCATCTCACCGTCCGTCCCTCCCTCCTTCCCTCCCTC
CCTCCCTCCCTACAGGCCAAGGAAGGCACGGCCAAGAAGATGTCGGCGGG
AAATGAGCGGTCGTTCAAGCGGATGAAGAATAAATTGAACAAGAACAACA
AGACCCACGAGGCGGAGATCGCGCTGTACAAGCAG GTAGGTAGGTAGGTA
GGTAGGTTGGTTGGTTGGTAGGGAGGGAGGGAGGGGAGTGGAACGGAAGG
AAAGCAGATGAACACACTTGCACTGAACTCCACTTTCTCCCCCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGACCCTGCGGC
CTACATGGCCGACGAAGCCGCGATGGATGAGGTGAGCGGCAGCAGTAGTA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCAGTGACAGTGACTCC
GACTCGTCGTCCTCCTCTTCTTCGGAT GTACGTTGGAAGGAGGGAGGGAG
GGGGGAGGGAGGCAGAGGGGAGGGAGGGAGGGATGTCAAGGCCATGCAGC
TGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTCATCATCATCAGCAG
CAGCAGCAGCGATAACGAGTCTGAACACGAAATGATTCCTTCTTACACAT
GCACTCCGCCCTCCCCCCCTTTCCTCCCTTGCGCTCTGCAGAGCGATTCG
GACAGCGACAGCGACTCCTCCTCCTCCTCCTCGTCTTCCTCCTCTTCCTC
CTCCTCCTCCTCTTCCGGCTCCTCGGCGCCTATCGCCCGCAAGAAAACTA
ATAAG GTGCATCGATTATTAAATCGGGAGGGAAAGAGGGAGGGAGGGAGG
GAGGGAAGGAGGGCGGGTTTGCAAAGACTTGTATATACGCGGAAACTGCG
TTCGGATTGAAAGCAGGCAGGCAGGCAGGCAGGCAGGCAGGGAGGGAAGG
AGGGAGAGAGAACACACAAGGATGACCATTCGATACACAATTCCTCGTTT
CCGAGAACCGCCCTCTTGCCTCGCTCTAGCGATAGAGGGAGGGCCAGCGG
GGGGGAGGTGTGAGATGACTGTTATCAAGATTTATTATTTATAATGTCTG
AGTTCAAGTACAACCCCTCCCTCCCTCCCTCCCTCACTGCCTCCCTCCCT
CCCTTCCCTTTGATGGATTGCTCACTCTCACCTCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTACCTTTCTAGCTCTTCGATGGTTCC
GACAGCGACTTCTCCGATTCAGACGAGAGCTCCAGCAGCGAGAGCGAAGC
CGAGAACCAGCTCAAGG GTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAAGGAGGGAGGGAGGGAGGAAAGGATTAGGTTGCCAACGTG
TGCTCTATTTCGACGCCTCCCCATACACACTACAATACACACTTTTATTA
ACCTGTTTATGGACGTAGTTTAACCCCACATTCATACCCACACGTGCATT
TACTTGAATATAGGCCGAGCCCGATGGTTGAAGAGGGCGCCCACCGGCAA
GGAGAAGGAGAAGGACGAGAAGAAGAGGCAGCAACGCATCG GTACGACCT
TCTTTCCCTCCCTCTCTGCCTCCCTCCCTCCCTCTAACCTTCCCTTCCCC
CCCCCCCTCCTCCAGGTGAAGTCGGCGCGGATGGCGAGCAAATCGCGCGG
CGTAAGAAGAAGGTCGGCGTGGAGGGAGGGGCGGCTGCTGCTGCCGCTGC
CCGAAGCTTGCTCTACGACCAGCTGACCCTGCCGGAG GTATGGAAAGGAA
GGGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAAGAAGACATCCACACTCTCATTTGCACCGCAGGCATTGACCAATCTTG
TCGCCCTCCCGCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTG
CTTTCAAACCAATTACCAGTACAAGAAGAAGGTGACGGAGGTGGTGGCTT
CTCGAGGGCGTCGATCCACAGGGTCGGCGGAGCTGCTGCGGCAGTTGCAG
CACCTGGCGTATGTGGGCCGTCGCTTTG GTGGGGAGGGAGGGAGGGAGGG
CGGGAAAGAGGGAGGGAGGGCGGGAAAGAGGGCGGGAAGTAGGGAAGGAG
GGAGGGAGGGAGGGAGGGAGGGAGAAGAGAGGCAATTTGCTGAAAGGAGG
CCGAGAAACTGATGCAGACAACACTACCCCCTCCCTCCCTCCCTCCCTCC
CTGCAGGTCTTGCGGAAGAGGCCCCCGTGGTGATGCACTTAATCCTGGCC
ATGTTCGACACCAAGCGGGCCGTGGACGAGCCGATGCATGTGGGACTGTG
GCAGCAATGCGCAGCCTACCTACAGCGACTCCTCGCATTGCTGGAGGCGG
CCCCGTCGAGG GTAGGGAGGGAGGGAGGGAGGAGGCGGTGGCGTCTGTGC
GCGCGGCGAAGCTCCAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGCAGCG
GTTGGTCACTCTCGTTCTCCCTCAATAATAGCAGCCGTTCGATTTCCTGC
CCCCCCTCATCTCATCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCAGGTGTTGAAGAACGGCACCGATGTGGCGGACTCCTTGGTCACC
GCTATGGGAAGAACCAGCCTAGCCGCTATGCCTGAGGGAGGGGCGGAGGG
CGTGGGGGAGCAGAAGGGAGAAGAGGAGGGGGTGGCACGGGCGGACCTGG
ATTACGATGCGGAGATAATTCAG GTAGGTAGGGAGGGAGGGAGGGAAGGA
GGGAGGGAAGGAGGGAGGGAAGGAGGAAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGA
GGGAGGGAGGGAGGGATAGATAGTGGTCACGAGTTATCCCAACGTCGCCG
TCCGATTGATTCATTACGTATATTCTCCCTCCCTCCCTCCCTCCCCCCCT
CCCTCCCTCCCCTCCTCCCCCCCTCGCGCAGGTGCCTGGATCCTTCGGCT
ATTTCGTGACGCGACTGGCGGACGAGTACACCAAGTCGTTGCAGCGGATC
AATCCGCACACCGGTGATTATGTGGCACGGCTCAAG GTAAGAAGGGAGGG
AGGGACGGAGGGCAAGGAAGTCAAGAGTACTGAACGGAACTCCACGCTCA
GCCCCCCACCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCCTTCCC
AGGACGAGGCCGTCCTCCTCCGCCTCGCCCAGGGGGTCCAAGCCTACTAC
ACCCGCGCTGCCTCCAAAGCCCGCCGTCCTGCCGTGCGTCAGACTGACAT
GGCCCATGCGGCCGAAGTGGCCGTCATCAGCATTAAGTACATCTACTACA
AGCACGACTCCCTCGCGGCCAAG GTAGCCTTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTTCCTCCCACTTGCTACGTCCCACCCCCACACCC
CTACACCCTCCCTCCCCCCCTTCACACCCTCCCTTCCCCCCTCCCCTGCG
CAGGTGGCGGCCGATCGCGCCTACTTCGAGAAGTGGGGCTCACTCGCCTC
TATTCACCCTGCGTGCTTAGGCGGCGTCGCGCCCATCCCTCCTCCCCCTG
CCGGTGGGAAGATTGATGCTAC GTAAGCCCCTCCCTCCGCCCCTCCCTCC
CTCCCTCCCTCCCTGCTTGGGCAGCATCATCCCTGTCGTTCCTACCGCTC
TCAATGGGAAAGTCGACGTCGAGATTTTCTCTCCTCCCTCCCTTCCTCCC
TCCTTCCATCCAACACTCCTTATTGCTTCCCTCCCTCCCTCCCTCTCCCC
CTCCCTCCCTCCCTCCCTCTCCCCCTCCCTCCCTCCCTCCAGCACGATGC
ACCCCGCCGCCGTCTCCTCCGAACGCCCTGAGCGGAAGGAGCAAGTCGAT
GAGGGGGAGCCGCGGAATTTCCAGAAGGAGGTGGCCGAATTGGCGATCTT
CGTCTACCGCCACG GTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTTCTCAACATCCTCAGGCTTATTCCTCCCCGCCCTCCCCTCC
CCCACCTCCGTCATCCCAGATGAGGCCCTTCAGGAGATGCTGGCCATGCT
CCATCAGTGTCGCTCACCACCCACCCTCCCTCCCTCCCTCCCTCCCTCCC
CCCCCGCAGGCGAGGCCCGTCAGAAGATGCTGGCCATGCTCTGTCAGATC
GCGCACCACGCCCTCCACGACCGCTTCCATGAAGCTCGGAACCTCTACCT
CATGAGCCACATCGCCCGCGACATCAACGAGCTTGAGGATGAGATGAAGA
TCCTG GTAAACGAAGCTTTCCCTCCCTCCCTCCCCCCCTCCCTCCCTCCC
TTCCTCCCTCCCTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTTTCCCCTTGCCCTGCGGTGGCCGCTGTACTTCACCCATTTTCC
TTCCAATCCAGTCACGTCTCTCCCTTACAGTCTTCTCACCTCTCCTTTGC
AACCACCGTGTTCTCATATACCCCGCCCTCCCTACCAGTTCAACCGCACT
ATGGTCCAGCTCGGGCTGTGCGCCTTCCGCCACGGCCTCATCCACGAGGC
CCATCAATGCCTCTCCGAGATCTGCTCCAAGCGTCCCAAGGAGCTGCTG G
TAGGGATGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGTCTACACC
AGCACAAGATCTACAACTAGCAGGGGAACAAACAATCAATCATTTCCAAG
TGTCCCAATCATTCGAACCGAGAAACATCACGCGGCGTCGACAGCTTGAC
CTCCCTCCCTCCCCGTCCTGATGCCCTCCCTCCCTCCCTCTCTCCCTCCC
TCCAGGCCCAAGGCATCGCGCGCTCCTTCCATCACAGAGATCAAGATCCC
GAGGCTGAGAAGGAGGAGCGTCGGCGACAGCTGCCCTACCACATGCACAT
TAATATCGACCTCCTTGAGCTTTGCCACCTCACGAGTGCCATGCTCCTTG
AG GTACGCTCTTCTTTTCCCCTCCTCCCTTCCTCCTTCCCCTCTTTCTGC
CTCTTTTTGGAACACGCTCAGTGATTCTTACCGCGTGGCCCTTGCTTTCC
CTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCCTTCCCTCCAATC
GCATCCTCTTTCTCCCACTCCCTCCACCCTCCCCAATCCACTCACCTGCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCATCAGGTGCCCAATCTGGCCA
CCATGGAGGGGCGTGTGGACCGCAAACGAGTCATTTCAGGTTATTTCCGC
AAG GTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
AGGAGGGAGGAAAGACGGGAAGAAAGAAGTCAGCACCGTTGTTGCTGCCG
TGAAACACTCATCTTCCACCTCTCTCCCTCCCTTCCTCCCTCCCTCCCTC
CCTCCCTCCTTCAGGTTTTGCAGCAGTACGAGACGCAAGCCTTTGCAGGC
CCACCGGAGATCATCCGCGATCATATCCTAGCGGCGGCTTCCGCATTAGC
CACGGGGGACTGGCGTACCTGCCGTGATTTG GTAAGAAGAGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAATGCCGGTGAAGTGAGCTTTTGGGTC
TCGGGTGCACGAAGAGGTCAATCGTTCACGTACCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCAGGTCTTCAAGCCGGACGTCTGGCACCGGATCCCAGGA
CCAGGGGCCGTGGAGAAGGTGCAGGCCATGCTTTTGGAGAAGATTAAGGC
TGAGGGCTTACGTACCTATCTGTTCACGTTCTCGCCGTTTTATGACTCCT
TGTCCTTGCCTCAGTTGTGCGACATGTTTGAGATGGAACG GTGAGGAGGG
AGGGAGGGTGGGCGGGAGGGAGGGAGGGGGGGAGGGAAGAAGGGAGGGAG
GGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAAGGAGGGAGGGATTGCAAGCGTGTTGATTGTCCTTGCTCTCTGCC
ATATCCGAAGCCCGCTTCCTCCCCTACGGATGCTCATCTCTTCCTTCCCT
CCCTCCCTCCATCCCAGTGGCACGGCGCACAGCATCATCAGTAAAATGAT
GATCTACGGCGAGCTTCACGCCACCTGGGATCAGCCCACCGAGACGATCG
TTCTTCAACGGGTGGAGGCCAGCCATTTGCAGATCCTGGCCCTGCAATAC
GCTGACAG GTACGTCCCTCCCTCCCTCCCTCCCTCCCTCTCGCCCTCGCT
CGCTCCCTCCCTCCGGCCCTCTGCATACTCATGTGTTTGCACCTCCTCAC
CCGCATTTGTCTCCCCGTTCCATGTGTCTCTATTCCCTCCCTTTCCTCCT
CTAAATTCTCCTCTTGCTTCACACCCCCGCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCAGGCTCGAGAGACTTGTGGGAGCGAATGAGGGGATGGTGCAC
CTCAAGAGCGGCCGTGGGGATGGAGAGAAAGGGCAAGACGGCGACCACCA
CGGAGGAAGAGGGGGAGGACGAGGCGGAGGACGAGGCGGAGGGAGGGGGG
GAGGACGAGGGGGAGGGGACGGAGGGGGAGGGGAGGAGGGAGGTTGGAAT
CAGTCGGGAGGGAGGGGGAGGGGGAGGGGCCGAGGGAGGGGCCGAGGGAG
GGGGGGAGGAGGGGGATATCGGGGAGGAGGAGGGTTTGGGGGCGGAGGCG
GATTCAATAGCTTTAGATCGGCTGGGTTCTAA back to top Coding sequence (CDS) from alignment at chr12:1003391..1011522+
>NO12G03650.1 ID=NO12G03650.1|Name=NO12G03650.1|organism=Nannochloropsis oceanica|type=CDS|length=3210bp|location=Sequence derived from alignment at chr12:1003391..1011522+ (Nannochloropsis oceanica) ATGAGTCGGCCGGGTGGCAAGCTCTGGCAAGGCTCCGACGATGATTCGAG CGCGTCCGAAACCGAGGCAGTGGTGGACGTGGGTGGGGTGGAGAAGCGCC AACAGAAGAGATGGGAGGTTGATAGCGACTCGGAGTCGGAGGATGAAGTT CGCGTTGTCCGCTCTGCCAAGGACAAGGCCTGGGATGAGATGAAAGATAA GGTGGTCAAGATCCAGAATGCTTTGAAAATCAACGACTGGATCATCGTCG AGAACGAGTTTGATGACCTCAACAAGCGCGTAGAGGCCAAGCGTGCCCTG TTCGGCACCGGGGCTTTCCCCAAGTTTTATATCAAGCTGTGCGTGACGCT GGAGGAGAAGCTGGTCGAGATCCGTGACAAGGCCAAGGAAGGCACGGCCA AGAAGATGTCGGCGGGAAATGAGCGGTCGTTCAAGCGGATGAAGAATAAA TTGAACAAGAACAACAAGACCCACGAGGCGGAGATCGCGCTGTACAAGCA GGACCCTGCGGCCTACATGGCCGACGAAGCCGCGATGGATGAGGTGAGCG GCAGCAGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCAGT GACAGTGACTCCGACTCGTCGTCCTCCTCTTCTTCGGATAGCGATTCGGA CAGCGACAGCGACTCCTCCTCCTCCTCCTCGTCTTCCTCCTCTTCCTCCT CCTCCTCCTCTTCCGGCTCCTCGGCGCCTATCGCCCGCAAGAAAACTAAT AAGCTCTTCGATGGTTCCGACAGCGACTTCTCCGATTCAGACGAGAGCTC CAGCAGCGAGAGCGAAGCCGAGAACCAGCTCAAGGGCCGAGCCCGATGGT TGAAGAGGGCGCCCACCGGCAAGGAGAAGGAGAAGGACGAGAAGAAGAGG CAGCAACGCATCGGTGAAGTCGGCGCGGATGGCGAGCAAATCGCGCGGCG TAAGAAGAAGGTCGGCGTGGAGGGAGGGGCGGCTGCTGCTGCCGCTGCCC GAAGCTTGCTCTACGACCAGCTGACCCTGCCGGAGTACAAGAAGAAGGTG ACGGAGGTGGTGGCTTCTCGAGGGCGTCGATCCACAGGGTCGGCGGAGCT GCTGCGGCAGTTGCAGCACCTGGCGTATGTGGGCCGTCGCTTTGGTCTTG CGGAAGAGGCCCCCGTGGTGATGCACTTAATCCTGGCCATGTTCGACACC AAGCGGGCCGTGGACGAGCCGATGCATGTGGGACTGTGGCAGCAATGCGC AGCCTACCTACAGCGACTCCTCGCATTGCTGGAGGCGGCCCCGTCGAGGG TGTTGAAGAACGGCACCGATGTGGCGGACTCCTTGGTCACCGCTATGGGA AGAACCAGCCTAGCCGCTATGCCTGAGGGAGGGGCGGAGGGCGTGGGGGA GCAGAAGGGAGAAGAGGAGGGGGTGGCACGGGCGGACCTGGATTACGATG CGGAGATAATTCAGGTGCCTGGATCCTTCGGCTATTTCGTGACGCGACTG GCGGACGAGTACACCAAGTCGTTGCAGCGGATCAATCCGCACACCGGTGA TTATGTGGCACGGCTCAAGGACGAGGCCGTCCTCCTCCGCCTCGCCCAGG GGGTCCAAGCCTACTACACCCGCGCTGCCTCCAAAGCCCGCCGTCCTGCC GTGCGTCAGACTGACATGGCCCATGCGGCCGAAGTGGCCGTCATCAGCAT TAAGTACATCTACTACAAGCACGACTCCCTCGCGGCCAAGGTGGCGGCCG ATCGCGCCTACTTCGAGAAGTGGGGCTCACTCGCCTCTATTCACCCTGCG TGCTTAGGCGGCGTCGCGCCCATCCCTCCTCCCCCTGCCGGTGGGAAGAT TGATGCTACCACGATGCACCCCGCCGCCGTCTCCTCCGAACGCCCTGAGC GGAAGGAGCAAGTCGATGAGGGGGAGCCGCGGAATTTCCAGAAGGAGGTG GCCGAATTGGCGATCTTCGTCTACCGCCACGGCGAGGCCCGTCAGAAGAT GCTGGCCATGCTCTGTCAGATCGCGCACCACGCCCTCCACGACCGCTTCC ATGAAGCTCGGAACCTCTACCTCATGAGCCACATCGCCCGCGACATCAAC GAGCTTGAGGATGAGATGAAGATCCTGTTCAACCGCACTATGGTCCAGCT CGGGCTGTGCGCCTTCCGCCACGGCCTCATCCACGAGGCCCATCAATGCC TCTCCGAGATCTGCTCCAAGCGTCCCAAGGAGCTGCTGGCCCAAGGCATC GCGCGCTCCTTCCATCACAGAGATCAAGATCCCGAGGCTGAGAAGGAGGA GCGTCGGCGACAGCTGCCCTACCACATGCACATTAATATCGACCTCCTTG AGCTTTGCCACCTCACGAGTGCCATGCTCCTTGAGGTGCCCAATCTGGCC ACCATGGAGGGGCGTGTGGACCGCAAACGAGTCATTTCAGGTTATTTCCG CAAGGTTTTGCAGCAGTACGAGACGCAAGCCTTTGCAGGCCCACCGGAGA TCATCCGCGATCATATCCTAGCGGCGGCTTCCGCATTAGCCACGGGGGAC TGGCGTACCTGCCGTGATTTGGTCTTCAAGCCGGACGTCTGGCACCGGAT CCCAGGACCAGGGGCCGTGGAGAAGGTGCAGGCCATGCTTTTGGAGAAGA TTAAGGCTGAGGGCTTACGTACCTATCTGTTCACGTTCTCGCCGTTTTAT GACTCCTTGTCCTTGCCTCAGTTGTGCGACATGTTTGAGATGGAACGTGG CACGGCGCACAGCATCATCAGTAAAATGATGATCTACGGCGAGCTTCACG CCACCTGGGATCAGCCCACCGAGACGATCGTTCTTCAACGGGTGGAGGCC AGCCATTTGCAGATCCTGGCCCTGCAATACGCTGACAGGCTCGAGAGACT TGTGGGAGCGAATGAGGGGATGGTGCACCTCAAGAGCGGCCGTGGGGATG GAGAGAAAGGGCAAGACGGCGACCACCACGGAGGAAGAGGGGGAGGACGA GGCGGAGGACGAGGCGGAGGGAGGGGGGGAGGACGAGGGGGAGGGGACGG AGGGGGAGGGGAGGAGGGAGGTTGGAATCAGTCGGGAGGGAGGGGGAGGG GGAGGGGCCGAGGGAGGGGCCGAGGGAGGGGGGGAGGAGGGGGATATCGG GGAGGAGGAGGGTTTGGGGGCGGAGGCGGATTCAATAGCTTTAGATCGGC TGGGTTCTAA back to top