NO12G00750.1, NO12G00750.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO12G00750.1
Unique NameNO12G00750.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1107
Alignment locationchr12:257342..258448 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:257342..258448 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G00750.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00750NO12G00750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO12G00750.1NO12G00750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO12G00750.1.cds1NO12G00750.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO12G00750.1 ID=NO12G00750.1|Name=NO12G00750.1|organism=Nannochloropsis oceanica|type=mRNA|length=1107bp
ATGGCAGACAGCCCAGAAGAGGACGACGATGCGGTCGCATCTTTAGAGAA
TCTTTTCGATGACGAGAATCAACTGCCTCCACCTTTTCCCTTGCGGCCCC
TTGGAGCTCCATCCACCATGGTCATCCCTCTGTTCCAAGACGCACGCGAC
GCTCTCGGTGGACGTGTCTGGAAGGCTTCCCTCTTTCTAAAAAGATGTCT
TGAGCAGGAGAAAATCACACCAAGCCTGGGCGGGCTGGCGGTACTGGACG
TCGGCGCGGGGATTGGAGCATTGGGTCTAGCTTGTGCGCTCGCGCGCCCT
GTGCCTCCAGCCTTTGTGGCTTTGACAGATAAGCAATGCTTGATGCCTTT
ACTGTATCGAAATGTGGAAGTTGCCCGGCTAGTAGCGGATGGTGCTTCTC
CTGATGATGCTGTTGCTATTGCTGCCGCTGCTGCGGCTGGTAAAATCAGT
GGTGCTGCAGTGTTGGCGCCGCCGGTTGAGATTACCGCGATGGGTAAGGC
CGTTGTGGGAGGAGGGGGAGGAATAGATACGTATATAAAAATAAAAAATG
AGGAGAGACAAGTACCAAGAGACGAAAAAGGGCAGGAAAAAGGGGAAAAG
GGTGGAGGGCAAAGAGGTGCCTGTCGAGTAGTCGCCTCTCCCTTAGACTG
GTTAGAGCATGGCAATGGCCCCCAAAGCAAGGCTCTGCTTCACCTTCTCC
ACGCTGAGACAGGAAAGAGGCATTTTGATTTGATATTGGTAGCGGATTGT
GTGTATTACCCGCAATTGTATAGGCCATTGGTCGAGGCGTTGGCGGGAAT
GGCAGGTGAGGAAACGAAGGTGGCGATCGTGAATGATGACGGAAGGACGG
ATGCCGCTGGGGTGGAAAAAACCACAGGGAGGAGGTGGGATGAAGAGTTT
TTTGATTTACTGAAAGAGAAATTTATGTGGGGGAAGGAGGAGGGAGGGAA
GGAGGGGAAGGGAGAGGATAGGCTGTATCCCGAGGCGAAGAAAGAGGAGG
GGGGAGGGGGGCCGTTTCGAGTGGTGGTTGCGAAGAGGAGGAGAGTGGAG
GAGGAAAAGGAGGAAGAAAGGAGAGGAATGAGGGGGAAAGGAGAAAGACG
TGAGTGA
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protein sequence of NO12G00750.1

>NO12G00750.1-protein ID=NO12G00750.1-protein|Name=NO12G00750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MADSPEEDDDAVASLENLFDDENQLPPPFPLRPLGAPSTMVIPLFQDARD
ALGGRVWKASLFLKRCLEQEKITPSLGGLAVLDVGAGIGALGLACALARP
VPPAFVALTDKQCLMPLLYRNVEVARLVADGASPDDAVAIAAAAAAGKIS
GAAVLAPPVEITAMGKAVVGGGGGIDTYIKIKNEERQVPRDEKGQEKGEK
GGGQRGACRVVASPLDWLEHGNGPQSKALLHLLHAETGKRHFDLILVADC
VYYPQLYRPLVEALAGMAGEETKVAIVNDDGRTDAAGVEKTTGRRWDEEF
FDLLKEKFMWGKEEGGKEGKGEDRLYPEAKKEEGGGGPFRVVVAKRRRVE
EEKEEERRGMRGKGERRE*
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mRNA from alignment at chr12:257342..258448+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO12G00750.1 ID=NO12G00750.1|Name=NO12G00750.1|organism=Nannochloropsis oceanica|type=mRNA|length=1107bp|location=Sequence derived from alignment at chr12:257342..258448+ (Nannochloropsis oceanica)
ATGGCAGACAGCCCAGAAGAGGACGACGATGCGGTCGCATCTTTAGAGAA
TCTTTTCGATGACGAGAATCAACTGCCTCCACCTTTTCCCTTGCGGCCCC
TTGGAGCTCCATCCACCATGGTCATCCCTCTGTTCCAAGACGCACGCGAC
GCTCTCGGTGGACGTGTCTGGAAGGCTTCCCTCTTTCTAAAAAGATGTCT
TGAGCAGGAGAAAATCACACCAAGCCTGGGCGGGCTGGCGGTACTGGACG
TCGGCGCGGGGATTGGAGCATTGGGTCTAGCTTGTGCGCTCGCGCGCCCT
GTGCCTCCAGCCTTTGTGGCTTTGACAGATAAGCAATGCTTGATGCCTTT
ACTGTATCGAAATGTGGAAGTTGCCCGGCTAGTAGCGGATGGTGCTTCTC
CTGATGATGCTGTTGCTATTGCTGCCGCTGCTGCGGCTGGTAAAATCAGT
GGTGCTGCAGTGTTGGCGCCGCCGGTTGAGATTACCGCGATGGGTAAGGC
CGTTGTGGGAGGAGGGGGAGGAATAGATACGTATATAAAAATAAAAAATG
AGGAGAGACAAGTACCAAGAGACGAAAAAGGGCAGGAAAAAGGGGAAAAG
GGTGGAGGGCAAAGAGGTGCCTGTCGAGTAGTCGCCTCTCCCTTAGACTG
GTTAGAGCATGGCAATGGCCCCCAAAGCAAGGCTCTGCTTCACCTTCTCC
ACGCTGAGACAGGAAAGAGGCATTTTGATTTGATATTGGTAGCGGATTGT
GTGTATTACCCGCAATTGTATAGGCCATTGGTCGAGGCGTTGGCGGGAAT
GGCAGGTGAGGAAACGAAGGTGGCGATCGTGAATGATGACGGAAGGACGG
ATGCCGCTGGGGTGGAAAAAACCACAGGGAGGAGGTGGGATGAAGAGTTT
TTTGATTTACTGAAAGAGAAATTTATGTGGGGGAAGGAGGAGGGAGGGAA
GGAGGGGAAGGGAGAGGATAGGCTGTATCCCGAGGCGAAGAAAGAGGAGG
GGGGAGGGGGGCCGTTTCGAGTGGTGGTTGCGAAGAGGAGGAGAGTGGAG
GAGGAAAAGGAGGAAGAAAGGAGAGGAATGAGGGGGAAAGGAGAAAGACG
TGAGTGA
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Coding sequence (CDS) from alignment at chr12:257342..258448+

>NO12G00750.1 ID=NO12G00750.1|Name=NO12G00750.1|organism=Nannochloropsis oceanica|type=CDS|length=1107bp|location=Sequence derived from alignment at chr12:257342..258448+ (Nannochloropsis oceanica)
ATGGCAGACAGCCCAGAAGAGGACGACGATGCGGTCGCATCTTTAGAGAA
TCTTTTCGATGACGAGAATCAACTGCCTCCACCTTTTCCCTTGCGGCCCC
TTGGAGCTCCATCCACCATGGTCATCCCTCTGTTCCAAGACGCACGCGAC
GCTCTCGGTGGACGTGTCTGGAAGGCTTCCCTCTTTCTAAAAAGATGTCT
TGAGCAGGAGAAAATCACACCAAGCCTGGGCGGGCTGGCGGTACTGGACG
TCGGCGCGGGGATTGGAGCATTGGGTCTAGCTTGTGCGCTCGCGCGCCCT
GTGCCTCCAGCCTTTGTGGCTTTGACAGATAAGCAATGCTTGATGCCTTT
ACTGTATCGAAATGTGGAAGTTGCCCGGCTAGTAGCGGATGGTGCTTCTC
CTGATGATGCTGTTGCTATTGCTGCCGCTGCTGCGGCTGGTAAAATCAGT
GGTGCTGCAGTGTTGGCGCCGCCGGTTGAGATTACCGCGATGGGTAAGGC
CGTTGTGGGAGGAGGGGGAGGAATAGATACGTATATAAAAATAAAAAATG
AGGAGAGACAAGTACCAAGAGACGAAAAAGGGCAGGAAAAAGGGGAAAAG
GGTGGAGGGCAAAGAGGTGCCTGTCGAGTAGTCGCCTCTCCCTTAGACTG
GTTAGAGCATGGCAATGGCCCCCAAAGCAAGGCTCTGCTTCACCTTCTCC
ACGCTGAGACAGGAAAGAGGCATTTTGATTTGATATTGGTAGCGGATTGT
GTGTATTACCCGCAATTGTATAGGCCATTGGTCGAGGCGTTGGCGGGAAT
GGCAGGTGAGGAAACGAAGGTGGCGATCGTGAATGATGACGGAAGGACGG
ATGCCGCTGGGGTGGAAAAAACCACAGGGAGGAGGTGGGATGAAGAGTTT
TTTGATTTACTGAAAGAGAAATTTATGTGGGGGAAGGAGGAGGGAGGGAA
GGAGGGGAAGGGAGAGGATAGGCTGTATCCCGAGGCGAAGAAAGAGGAGG
GGGGAGGGGGGCCGTTTCGAGTGGTGGTTGCGAAGAGGAGGAGAGTGGAG
GAGGAAAAGGAGGAAGAAAGGAGAGGAATGAGGGGGAAAGGAGAAAGACG
TGAGTGA
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Synonyms
Publications