jgi.p|Nanoce1779_2|670904, mRNA_5597-protein (polypeptide) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|670904
Unique Name	mRNA_5597-protein
Type	polypeptide
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	7884
Alignment location	scaffold_11:38216..65834 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_11	supercontig	scaffold_11:38216..65834 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This polypeptide derives from the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|670904	gene_5597	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|670904	mRNA_5597	Nannochloropsis oceanica (N. oceanica CCMP1779)	mRNA

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>mRNA_5597-protein ID=mRNA_5597-protein|Name=jgi.p|Nanoce1779_2|670904|organism=Nannochloropsis oceanica|type=polypeptide|length=7884bp
MGGMSSSSNVLPTSYTSQIDVTLRSIFHLPSAFPESRMQAVVKHDDQQQC
EDLEAALALALEEDEASTCSVEASEAARQPREDLQAGMKENDNMNVRDIL
CRLLIYAGTIRGKVSKRWERIKILVVRERHVNVLLEKTKLPEGLCREVEG
ELYAAAQHRITSFEYKNTLRKLLFHLKESISEDDTTKGNPLIRQRLLSGE
LLPFHLVRLAPEEFLRDDEKALREKAGEEAHKRMSLSAEEVQASPLQRSG
PSCISLVPDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDD
GLADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDADGI
SVGLLLGDADGEADGLLDGDDGGLGEDARDEDAVGEAVGSLGQMPPLNTS
GPSCISLVPDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDD
DGLADGDAEGISVGLLLGDADGEADGLLDGDDGGLGEDARDEDAVGEAVG
SLGQMPPLNTSGPSCISLVPDDGLADGDADGISVGLLLGDADGEADGLLD
GDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLDGD
DDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAD
GISVGLLLGDADGEADGLLDGDADGLLDGDDDGLLDGDDDGLADGDADGI
SVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDAD
GEADGLLDGDADGLLDGDDDGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLLDGDDDGLADGDADGISVGLLLGDADGEAD
GLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGL
LDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLAD
GDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGL
LLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEAD
GLLDGDADGLLDGDDDGLLDGDDDGLADGDADGISVGLLLGDADGEADGL
LEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLD
GDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
AEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLL
GDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLD
GDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
ADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLL
GDADGDADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LDGDDGGLGEDARDEDAVGEAVGSLGQMPPLNTSGPSCISLVPDDGLADG
DADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLL
LGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADG
LLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLL
DGDDDGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDG
DDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDA
EGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLG
DADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLL
DGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDG
DDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDA
EGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLG
DADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLL
DGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDG
DDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDA
EGISVGLLLGDADGEADGLLDGDDGGLGEDARDEDAVGEAVGSLGQMPPL
NTSGPSCISLVPDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLD
GDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
AEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLL
GDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LDGDADGLLDGDDDGLADGDADGISVGLLPGDADGEADGLLDGDADGLLD
GDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
ADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVRLLL
GDADGEADGLLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGL
LDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLD
GDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
AEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVRLLL
GDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LEGDADGLLDGDDDGLADGDAEGISVRLLLGDADGEADGLLEGDADGLLD
GDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
AEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLL
GDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LEGDADGLLDGDDDGLADGDAEGISVRLLLGDADGEADGLLDGDADGLLD
GDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
ADGISVGLLPGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLL
GDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGL
LEGDADGLLDGDDDGLADGDAEGISVRLLLGDADGEADGLLEGDADGLLD
GDDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGD
ADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLL
GDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLD
GDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGD
ADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLL
GDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGL
LDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLD
GDDDGLADGDDDGLADGDAEGISVGLLLGDADGDADGLLDGDADGLLDGD
DDGLADGDADGISVGLLLGDADGEADGLLDGDDGGLGEDARDEDAVGEAA
SPLQNSGPSCISLVPDDGLADGDAEGISVGLLLGDADGEADGLLEGDADG
LLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLA
DGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADG
DADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLL
LGDADGEADGLLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADG
LLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDDGGLG
EDARDEDAVGEAASPLQNSGPSCISLVPDDGLADGDAEGISVGLLLGDAD
GEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGD
ADGLLDGDDDGLADGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADDISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISV
GLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDAD
GLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADGISVGLLPGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDADGISVRLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDADGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLDGDAD
GLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGL
ADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGL
ADGDADGISVGLLPGDADGEADGLLDGDADGLLDGDDDGLADGDAEGISV
GLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVRLLLGDADGE
ADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGL
ADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDADGISV
GLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEGISVGLLLGDADGE
ADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDAD
GLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEGDADGLLDGDDDGL
ADGDADGISGDADGLLDGDDDGLADGDADGISVGLLLGDADGEADGLLEG
DADGLLDGDDDGLADGDADGISVGLLPGDADGEADGLLDGDADGLLDGDD
DGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDAEG
ISVGLLLGDADGEADGLLDGDADGLLDGDDDGLADGDADGISVGLLLGDA
DGEADGLLEGEADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLEG
DADGLLDGDDDGLADGDAEGISVGLLLGDADGEADGLLDGDADGLLDGDD
DGLADGDAEGISVGLLLGDADGEADGLLEGDADGLLDGDDDGLADGDAEG
ISVGLDDRLVEGTRVDDGVGEGAATHAIKRDDC*

Synonyms

Publications