jgi.p|Nanoce1779_2|670404, mRNA_4611-protein (polypeptide) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|670404
Unique NamemRNA_4611-protein
Typepolypeptide
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length2267
Alignment locationscaffold_9:181867..189601 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_9supercontigscaffold_9:181867..189601 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This polypeptide derives from the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670404gene_4611Nannochloropsis oceanica (N. oceanica CCMP1779)gene


This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670404mRNA_4611Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>mRNA_4611-protein ID=mRNA_4611-protein|Name=jgi.p|Nanoce1779_2|670404|organism=Nannochloropsis oceanica|type=polypeptide|length=2267bp
MDTDLLELASSSSLPDDDEDNAGRAGGDGLMDTEITVVLSNDDHTAMNIN
NSWLPYASHIAASPDVTLTEVNEGLLGVVEREEELDAATAVAAACEDEDE
DEDEDEDKGRDGGGEGRKTLVLEVGRGWNTLGVGPHLKKLDTMVSLKLNF
TEEELGTYLKLAYRLILSPRLGVRAQVRLLRSTAALLHRSRIEVIWAKGV
ALDVMPLYERLQRDFLGEDENPVPLKASSHLVYSLRSAYLTALHALRHYY
SPSSSLLLLQHLLPSLHPSATSLVLAPQALLLLVGLLPTRLPPLPPSFCS
PSQQPTEGGKEEGLKPAYDVLLPHLLSSWHSLDNCPEWDLLFLRLLCRAR
KYTRTFRWWAHIPSIFTLLLHTFSLPSSGGSHAPEPRRFPSRLRALFHPP
IQHYNRLLLLSKLVVFVLGRGPEGGGGGGQEGGGEGGITADYPLRPSPPS
AQEGGEDYRPIPCSLATKHLLSLLSSLRTFFHPSNAGPWSDELAFFLSHL
TTAMAKRLGWQAADADCTEEEEEEDADMEGGREGGAVRMPELGDEEVTAV
VEAVLPLAHQCLYNKRPSVISAGETVLKTLACLRPSFVAKFTLPLLSQAL
DPSSLTTTHQTPASLKALAVVTKPLLLTPRPVLLPFLPTLLNWSLPGLDS
NDIHKTSATVAFYIALLDWLPLLPSLPPSLPPRDPAAFSKRLLFLGGGEE
GRQEGEEEAWEEAVAEVVPVLGEWALAVVEKCLGMMMDKEGGAGSGSTEG
GKKNVLGRIEAATSLVWRLLFRSLFTQMDHGLHLLARQRVHAFFLENTLP
DAVKDASYLCECLAMASPTATLLLFLGPPGDTGEGRGGGRGDRLLPSSQA
EMEAMAPRTLAWRTRLMAGMVRFSGPALLPYLLPYLPEGGGEVDGGGQMS
LPSLLSYTLEHSDKAVRKAGGKLFRRALQALLEIYPTDYHSYPPSIPSSS
CSSSSSLPPFFLSPPSSSDDLSPAFHVPVCEEITAARLLLQMFALPAVDA
LSSSASGLFTPPSLPSSSSSSTSSSFSSRELEESWRYKLKILQHAIRGSL
PLLPSLPAGEDDMAVHHGALLLFQTAAANPATAAFLASLRPSLAQALHAL
LPALISPSSPLHRDVKALKTWCKISSLLLNSVGSSRAEEAPANRQAMTYV
RAVTRDWMLESYRRATRVNEARQGRKGGREGLRTRSLPAGHSRRLLVEGV
YTHHLLRCHTAAYRLPRLTRPKRAGREGRREGGQTYTTLLFQDLIALSSH
SISTEGGEAITPSQQVLLHERSTAATFLLCQAPSMRQISSSFPLTLALLR
ALPSSSLLVHALARDKQETMTKRLSDVIITYVSYWNAHDLASPSRIRQHH
ALVTELAAPLLLLEKQQQQQVEGEGMDMVVVPLIEGGKVGGREGGKGAVL
LHWRYQLLILWELIHLAQPSSPSSPSSPSSPSSPDRPPPPHPSDANAIIW
DVIISSLCSAGDGQPLQNLALAGLFRLLSFTLPPSHGRRRAASSSSLPSS
PTSSSTSSPSSSSSYVLLSDPVAALTEEGEVANEDEEGKEEGRVLSPLGQ
RLSSPAFLRSFCLALAHDHKEEGLEGGRERGTDPRWSAGVEDLLRDARAK
WGGPVPLTRFHLSGRHFSVRHAQLVRLWLQVLKQEGGREGGREGRLLVET
AVDLLLEKTSQEHEGAFNATIAEIMAGVVSAFVRRSRSSSSVEDEGGEGG
RARGRTMVKWAEWVVPVLERVLPRLSFDYSCEWVDAFRFISQEQDPRLLS
PLSEWVLARVTSTLGHLSLMEGEGGREGGVGDDYTAQAKWLRLLQPFLIE
ACGYPSTRKDGQGLTRRLVPFLLRALGHPYKLCREQVAWCLFLVYGYAGV
PLEEEGGGEGGVVGEVRRACGVGAEDGGSGGEGKGSGEEEMLEGLAAATA
KLLKVEEEGGKEGGVPLSLTSNISSTTSVKERARRRETVLRWVLTSVQGG
DRVNYSGYVLPLLDVVYECVRDKEEEVALLGKHAARFLARALRFNSRKLI
EAQDDSASPSLPPSSSSALSLPAHFLSPLLHLASHPSWHVKLEVTAYALP
LFHAQHFPLLLPLEQASIRSQLITLLSDDRKEVQNAAIESLAAVLSSCEI
NLVKALVEVHAGKIVGSNERGGKGRRRKVVVAGKEGGGGGDGGGVTSTAA
ATPKTTASAGVVAAAAQQEEKGALHTSLLVLAAVVSAYPYDVPPFLPRAL
AVLARSCEGGGRGGGASPSMQVTIRKTLTDFKRTHQDEWEHRHKYRFTPE
ELDALSDVLVSPHYYA*
back to top
Synonyms
Publications