jgi.p|Nanoce1779_2|576892, mRNA_309-protein (polypeptide) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|576892
Unique NamemRNA_309-protein
Typepolypeptide
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length3067
Alignment locationscaffold_3:758950..768150 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:758950..768150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This polypeptide derives from the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576892gene_309Nannochloropsis oceanica (N. oceanica CCMP1779)gene


This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|576892mRNA_309Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>mRNA_309-protein ID=mRNA_309-protein|Name=jgi.p|Nanoce1779_2|576892|organism=Nannochloropsis oceanica|type=polypeptide|length=3067bp
MESDDREVTEPDDNVPVSPSPLPPTSSPQPSVRSTTLPSLTAGLTHLTIQ
IFPENITSSEGMHGSSLTPGEVGAASPFSPIITPVGTPRELIPPAGPLPY
DGNADLEKAIRMAMKNRDTAAWKLLIKARTVRNNLPTSGENACISVADAA
RGGEELRPALTKLGWTENEVKWAQAKADGDLVEGIKLLLKEETSTHHHSN
SDGGGEDDQEENKDDDEQHNQQHEQLNGSGSSHQQQHRRRGKPVSEGAEV
AVTSSILRRLSIDSTWQLLQSTSRTTGDEAARRKAWMKSALLLVQVSSLQ
RQGRLSLLVKKKMKIAVAHGLQKEVEALLKVVHQRQARHRRDSVDREDSL
FTSYKCPLTDDLLYEPVTLVCGHTFSKRALEGVLSSGNRACPICRKPISV
ADADELKVNILMRDTITRLFSDRILQLVKHDIACLNPENIELAAEEIFFI
IERYKSNEDVVDLALRTLLIWTREKRNLAPLSRRGLGREVLALLRMPALR
ASPKFLRRTAVAGLQVLQALGSGSTHGARILSEGAVWATALSLLLEKPKI
KGPELAALAAEAFNLVALAINANQENAAMRLDPCLLAHQILAFALAHQQE
ASNEMIVAALRLVNDLMSLARIKGTQHYVLGHGDARQVLNLWFAWGRVGE
ATTEGSAATAAIETGVGAKGELLLDQACSATVVPVPEVVREVASLFSTAL
FLQKHGIDAEEDLASVLIQAGTVQRGLEALVVFSENTELLLAVVPLLLRL
GFSPGLEANIIREEVCHQLKAPKFLTDVTRYLERLEEKAQHADSPEIPMV
FEKASSHRIDIQENGVKVMANGKGWVVGSAIGAGTSIVTYEILQEDKGDE
CSCLGISLVEDPSITAEYRSTGSPFITLRCFSGEIYRDSRVLHASEALKV
HPGGVVRIFIDMEAGTMSFQVNDGPPVLVASDLKGRTIYPAAYFYLGEPQ
PDRSTHPIIRMSITGSQVAKTLAIAVDAALAFAFPAPLRALVDIAGRRSR
SSSACASPLYQEGQIIRRRCTAVTTISDKTAVHEDPLFSAYCYGVGPGVT
SGIHTYVFKASSILSICFGMVASDAVEPVLRLGPGPPEGIRTSLIVTLWS
SGRVSSGGLLEGLRPVPYDAQDFFKAEEPVTIRVRLEGKENVLEVVRGAR
VIHVVEQLDRRLPGGQALHPFVGLLSANDSVSVEYRVSSPVHALGSEGIP
DRKAWTLKAQAALEELGQARCDSRTLLLQSPTRLSLPATFQYLEEATGPY
KPISLLEELKGRVCAGGLKADVLSDIAWNICRSVSRGMNWESNVREKALQ
LLASLPQGLEGKALVVGNNAGVRRGDISENLGSTSKGSSNIGSGGFLVPA
GALGLVVASSQDGCLTPGGLDLLTSLLGPPPCSPVFQAYARELGIVPLLL
TTMEGGSSRPRDVGSGADPMKGNSDDNRSLDLLLLLLQGPAAPLEAIRSE
VLSLGLLRTLLEHLTVRYINIPLEAQAFRRNHLQLIVELVAGKDWNQESL
FSELLQMDAPVTAANPFLIRPHTLDEPASTAAMMTGAVATAPGTVLSPNV
STGPFTTSSGGGADILLQRHKATKLQEGWRGHVSQSGEASTSWQDAAFWA
LKDGDLDMLRVLLAAPYSIPFIADRVIFAPAWPGPWRGVLSEPVTMLGAL
MVLARPNQVEEMKAFLETRAQAYRRQKRENVDDKPSISVSQPSMSFLRHP
NADGTLGTFAVDVQATEQFGFHHNDLVYAAAAPQWGHARVLGVQSKRLWL
QFQGCLGAVTCPSSGWAPLDLRLLRARREAEGSGTSTTFRLPLERGTRVV
RGPHWEWGIQDAFAGNLGTVLGNGGGDGWYRVMWDTSHTSNSYQYTPEHQ
DISRYNDPLGTSLSSLFPSLPACGSDYVDGRELGEEGENVEVCESSVNVV
TYAGEALANAGMDSLLALLHKLWPKAGNQWDDEEHVHQRHLLWICVSRLG
LRNPARMAKIVEHPSAQPLVNAAIYQLQHPDGEQAMGHLFFLAVAARHGS
NVILSAIEGALPYLLQLMAAPTSSTRAVVLSLSVINSLMYHHRQGASVHR
MVECNFENDHSALYAIMCACLQRVLLPTRENPHAAAHILAIRFLQSLFET
DPVVLHTSKNEEEQLEQLQDEFVTLLETYATFAFPKTMIEELLLLLLAWM
RATAMTDGGEIDPEKLRLAKERGAKVTFLARALLDEFEAANETLLQAPRQ
VLLSAPSILRRALTARKDISMRKRSVNLFLRAGTLGVLFQGDYEWTGAEA
GHVLALCTFLQTLLEAAPGRKEDIITLPLMRDLMPVLLDTNTDLAVTKAI
LQTYVSRLPEEESITEPVVVATTADGRRGNWRGNSESGISSSRSGACTST
SNSSKECTFWTSLGFGLAHALCVTYKRVMAEQTTASLALTLLASVVQETR
SLEQKDLEILLYPSPRSLPTVPASEVGAELGERYDDGAVAQIAAKLKIIG
MACHSFETDAHVDTNALVVRVVQWLQAYVTEQPVVEAALHLLQLLVDSTH
VLLPEQIIQSSGSLCTKSLFVAPPSSRHAPHHISSYPFSAPTLSSPTRLQ
RGVSASLGRQRMRRWHSSSEAVEELDLRMDEENDGMDGDEEAGARTAEEG
SEQEPEEEGADEWLTDRTSMQGMNGASMYLSRMTTMQDVAGGRVDNGSEL
SSSPFLEEVVRAEALPTTSVAGANEEKDEGLNGAVPDQGGVEVAFPMSVS
SEMDLAAAKPGWEPTGIRLPHWIQFHLPKEKRVGFGPATSVAQGAPPALM
LGEAKALLQHWRALQLEQRDYQNNTPKVLEISVGRLSSGASLPLPASSLR
IVRVIEQVNHRQTGWLSLVNDVELQEGEDVVQVLFSANFGADEVSTKTGR
FRVLARTRISVEQIQAQLHMTELLPELVAMAMAHAEDRSFLRTVTFFFRR
FYPADTASLPALANSEYDLARGQAAGITFSEDGKWATFPFGPKLLVSTLN
SSEGILRWVFRSSGNSSWAVGAIPASKIDRHDVMMTEQSLAVATTGLAGG
RMALRKEIQKRNVEVVIDVQAGHLMLTVENHSDSPILLPMPPDSQEPYHL
AAMGYSNTVIQFLDKL*
back to top
Synonyms
Publications