|
|
Properties
| Property Name | Value |
|---|
| Product | serine threonine kinase isoform cra_a |
| Orig transcript id | gnl|cribi|Naga_100970g2.10374.mrna |
| Orig protein id | gnl|cribi|Naga_100970g2.10374 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:40739..43425 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9979 ID=rna9979|Name=rna9979|organism=Nannochloropsis gaditana|type=mRNA|length=1422bp
CGCCCAACCCCCCTCCCTCCGTCCTTGGGAACCGCATGCCGACAACGAGA
ACAGGACTCACAGCAACAGCGGCGTGAGTCAGAGCAACGGGAGCAGCGGC
TACAGCGGGTTCAGTGATCAGAGTGACGTCAACAAGGGCAATGGTGCTGG
TTACTCCGACAACAGCTACATCAGTACACGCAATTACGGCGGTTACTCCG
ACAACAGTTACATCAGTACGCGCAGTTAGGGCGGTTACTCAGACAACAAT
TACATCAGTACGCGCAGTAACAGCGGTTACTCAGACAACAGTTACATCAG
TACGCGCAGTAACGGCGGTTGCTCAGACAACAGCTACATCAGTACGCGCA
GTAACGGCGGTTTCCATGACCCGAGTCACTGGCCCTATGGCACCCACGAT
AGTCAGAGGAACGTCCTCAAGAGTGGCAGCATCTATAGCGGTGAAGCCCT
TGTAGGGCGGCTTAAGACGTTGGGAGGGAAATCCCCTGACCCTCCCTCCT
CCCCTGTCACCTCCTCCACCACCCTTTCCTCCCTTCGCCCCACCACCTCG
CTTTCCCCCTCCTCCTCCCCTTTTCTCCTCCCTCCCTCATCACCCCTCCT
CCGGCGCCTCTCTGGGCTCATAAATCGCTCCCTCGCCTCCTTAAGTACGA
GCAGTCCTGCTTCTCCCCCACCCGCTTCGTCCCTCTTCCAGGGAAGTTGT
GAGGAGAAGGGCGAAGGGATGGATGAGGAGGGGGACGTCGGGTCTGGGCG
GCAGACGGGGAGGGAGGCAAGAGGATGAGGAGCCGTGATTCGGGGGTGGG
GGGGAGAGCGAGGGGAGAAACTGAGTGAGGAGGAGGTGAGGGCGAGGGAA
GTTGAAGGAGAGGATAGCAGCAGTGTCTTGGGGGCCGATGGAGGAGAGAA
AGAAGATAGAGAGGAGGGAGGAGGATCGGGCAAGGGGTACTGAAGTGGTC
CTTCTGTGGCCAGCGCGAGGGGTGTGAGGGGGCAGTACCAAGAAGCACGT
GAGGAGGAGGAAATGGACGAGGGAGGGATAGAGATCAAGCACGGGGAAGG
AGATGGAGAGGAAGAGATTCGACGAGGAGGAAGGAGGTGGGGGGGGTGCA
TAGATCAGTGATGATATGGAAGACGTGCATGCGTGTGGACGACAGAATGC
TTCATGGAGAAGAGTGAGGGGGGAGGTGAAGAGGGTACACAGCGAGGGGA
AGCGGGAGCAGGTGACAGGGAAGGGGGAACAACGCTGCGACGTGCTCGTG
CCGTCACGTGGGAGAAGTTGGCGAGAGAGGCTTCATTCGTAGTGGCATGA
TGGAGAAGAACCAGATTTTTATGCTGTCAAACCCAAAATCCTTTTGAGCA
CATGTAAAAAAAGAAGTTAAAATATGGGTAAATAATACATACGTCCTTCG
TACAAAGATTTGATACCTTGTC back to topprotein sequence of rna9979 >rna9979-protein ID=rna9979-protein|Name=rna9979|organism=Nannochloropsis gaditana|type=polypeptide|length=267bp
MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAF
LFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHW
DIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSP
AYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLG
ILNGRYSFPPRNAPPLPFPPSSSSSSSSFSPAFNQLITFCLNPNPSLRPS
LSDVMKEAQALVASPSF back to topmRNA from alignment at KK037259.1:40739..43425- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9979 ID=rna9979|Name=rna9979|organism=Nannochloropsis gaditana|type=mRNA|length=2687bp|location=Sequence derived from alignment at KK037259.1:40739..43425- (Nannochloropsis gaditana)
TCTACCTGGTCAGAGACGAGGCCTCAGGTCAGACCTTGGCGCTGAAGCGC
ATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAACGAGCTCAA
GGTGCGGCCCCTCCCTCGCTCCTTCCCGCCCTCCTTCCCGCCCTCCCTCC
CTTCCGCCCTCTCTTCCCTTCTTCTTCACCTTTACTTTATTCACCCTCAC
AACGTCTTCCCCCCGTCTGCAGGTCCTCCGTGCTGTTCAGCACCCCTCCC
TCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCAC
ACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTT
GACGGACGCCATCGACAGGTACCCTCCTTTCCCCCTCCCCTCTCTCCCTC
TTCCTCTTCCTCTTCCTCTTCCTCTTCCCCTCCCTCCCTCCCTCTCTTCC
TTCTTTAAGAGCGCCCGGCCGCTCCCTTCTCCCTGGAGGCCCTTCCCCAC
CCACTCATTCCACGGACGGATCATGTCCGCCATCTCCTTCCCGCCCTCCC
CTCACGCCTAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCT
TCGAACCTTCTTTGGCATCTGTCAAGGTAATGCTACCGCGTCGTGCCCTC
CCTCCCTCCCTCCCCCACGGGCTTCGAATCCTTTACTGCCTGTTGCTAAT
CCCTTCTCTTCCCTCTCTCCTTTTGCTTCTCTCATGCACTTATCCTGTAC
ATCCTCAGACTATACTTGTCTGCCTTTGCCCTCTTCCTTCCTCCTCGATT
CCTAAACACAATCCTCCCCCCCGCCTCCCTCCCCACCTTCTTCCTCCCTC
TGTCGCTCTCTCTCCAGGTTGCCTCGCTCAGTCTCCCTCCCTCCTCCCTC
TCTTCCTCCCCCTTCCCTCCCTCCCTGTCTAGGCCTCCTCGCCCTTCACG
AACACGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCT
GATCAAGGCCAGGTACACCCTCCCTCCCTTCCTCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCCCACCTCCTACTCGTCGCCCACCACGGGCTGAAATG
ACGCACCATGGGAGGCAGAAGTTAAACTCTCAGAGCTGACAGTGCGTTTA
GTGAGGACGTGGATGTTGTGCCTCCCCGTCATACGTCGAAGCGCCCCGCT
TCCAATGCAATCGAATGCCACTCGCGACGCGTGTGGCCTCGGTGTCCCCA
AGGACGATCGCTTCTTTTCGACCTCATGGATCCACCCTCCTTCCTTTTTA
CGATCCTCCCTTCCACCTATCCCATCCGCCCCCGCTCCCTCCGTCTCCCC
CCTTCCCAACCTCCCTTCCTCCCTTCTCTTTCTCTCCAGCCCCTCCTCAT
GGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCC
GAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCT
TACCGACCTCCAGAGCTCACGCAAGTAGGAAAGAAACCTCCTTCATTTCC
TCCTCTTTCTCCTCCCCTCCTTCCTTTCCCTCTTCTGGCAGAGATCAACG
ATCGAGCCTCTTTTCACGTGTCTTGGCCCAAGGAAAGCAACCTGGCTGGC
TCACTCCTCTTCCCTCCCTCCCTCCATTCCTCGCTCCCTTCCCAGGTCCT
CCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGGCTGTC
TCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCACCGAG
GGAGTCCTCAGGCTGGGCATCCTCAAGTAACCCCTTCCTCCCTCCCTCCC
TCCATCCCTCCCCTTCTCCCCCCCATCCTTGGACCTGGCAGCACTACCCT
ATCTCTGAGCCCTTGCGTCCCTGAAGTCTCTACCCCTCTTCCCCTCTTCC
CTCCCTTTCTTCGTTCCTCTTCCTTCCTTGTCAACCCTCTCTTCCCTCCC
TTTCTCCGTCCCTCCTTCTTCCTCTTCAACCCTCGCAGTGGCCGCTACTC
GTTTCCACCTCGCAACGCGCCTCCCCTCCCCTTCCCTCCCTCCTCCTCCT
CCTCTTCCTCCTCTTTTTCTCCCGCCTTCAACCAACTCATCACCTTTTGT
CTGAATCCCAACCCCTCCCTCCGCCCCTCCCTTTCCGATGTGATGAAAGA
GGCCCAGGCGCTGGTCGCTTCCCCCTCCTTCTAGAGCCTCCTCCCTTCCC
TCCCTGCCTCTCTCCTCCATTCCCGTCACGCTATCCCAGGTTCGGGGGGG
TGAAGGAAAAGCTCCTCATGAGCAAATATTGGTAAATCAAAGAAATATAC
ACGTAAACATAAGTGCGCCTCGGATCCTTCCCGTGAAACGCGTACACGGA
TGGGGGAAGGGGGGGGGTTGCTGAGGGAAGGGCAATAACGGCACAGAGAA
GACGAGGAAAATTCAGGCGTTTGTCTGTCGAAATAGAACAGCTTCCGTTC
TTCCATCGTAACAAAGGATGAGACTTTGATTGAAAAAGGCTGCCGTCTCC
CACGCCCCGTCCCTCATCCTTGCATGAAGACAAGGTATCAAATCTTTGTA
CGAAGGACGTATGTATTATTTACCCATATTTTAACTTCTTTTTTTACATG
TGCTCAAAAGGATTTTGGGTTTGACAGCATAAAAATC back to topCoding sequence (CDS) from alignment at KK037259.1:40739..43425- >rna9979 ID=rna9979|Name=rna9979|organism=Nannochloropsis gaditana|type=CDS|length=5628bp|location=Sequence derived from alignment at KK037259.1:40739..43425- (Nannochloropsis gaditana)
TGGCCGCTACTCGTTTCCACCTCGCAACGCGCCTCCCCTCCCCTTCCCTC
CCTCCTCCTCCTCCTCTTCCTCCTCTTTTTCTCCCGCCTTCAACCAACTC
ATCACCTTTTGTCTGAATCCCAACCCCTCCCTCCGCCCCTCCCTTTCCGA
TGTGATGAAAGAGGCCCAGGCGCTGGTCGCTTCCCCCTCCTTCTAGGTCC
TCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGGCTGT
CTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCACCGA
GGGAGTCCTCAGGCTGGGCATCCTCAACCCCTCCTCATGGACTTCGGCTC
CTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCCGAGCCGCCCTCC
TGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCTTACCGACCTCCA
GAGCTCACGCAAGCCTCCTCGCCCTTCACGAACACGACATTGCCCACTGG
GACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAGAGCCAACA
CCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCTTTGGCATC
TGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCCCCTCCTCG
ATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTCGGGAGATG
GCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGACGCCATCGA
CAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAACGAGCT
CAAGTGGCCGCTACTCGTTTCCACCTCGCAACGCGCCTCCCCTCCCCTTC
CCTCCCTCCTCCTCCTCCTCTTCCTCCTCTTTTTCTCCCGCCTTCAACCA
ACTCATCACCTTTTGTCTGAATCCCAACCCCTCCCTCCGCCCCTCCCTTT
CCGATGTGATGAAAGAGGCCCAGGCGCTGGTCGCTTCCCCCTCCTTCTAG
GTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGG
CTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCA
CCGAGGGAGTCCTCAGGCTGGGCATCCTCAACCCCTCCTCATGGACTTCG
GCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCCGAGCCGCC
CTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCTTACCGACC
TCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAACACGACATTGCCCA
CTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAGAGCC
AACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCTTTGG
CATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCCCCTC
CTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTCGGGA
GATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGACGCCA
TCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAACG
AGCTCAAGTGGCCGCTACTCGTTTCCACCTCGCAACGCGCCTCCCCTCCC
CTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTCTTTTTCTCCCGCCTTCA
ACCAACTCATCACCTTTTGTCTGAATCCCAACCCCTCCCTCCGCCCCTCC
CTTTCCGATGTGATGAAAGAGGCCCAGGCGCTGGTCGCTTCCCCCTCCTT
CTAGGTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCA
TGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCT
CCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCAACCCCTCCTCATGGAC
TTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCCGAGC
CGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCTTACC
GACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAACACGACATTG
CCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAG
AGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCT
TTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCC
CCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTC
GGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGAC
GCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCC
AACGAGCTCAAGTGGCCGCTACTCGTTTCCACCTCGCAACGCGCCTCCCC
TCCCCTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTCTTTTTCTCCCGCC
TTCAACCAACTCATCACCTTTTGTCTGAATCCCAACCCCTCCCTCCGCCC
CTCCCTTTCCGATGTGATGAAAGAGGCCCAGGCGCTGGTCGCTTCCCCCT
CCTTCTAGGTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGG
GCCATGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGA
GTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCAACCCCTCCTCAT
GGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCC
GAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCT
TACCGACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAACACGAC
ATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGG
CCAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACC
TTCTTTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCCCTCC
TTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCACACC
TGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTTGAC
GGACGCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGC
CGCCAACGAGCTCAAGTGGCCGCTACTCGTTTCCACCTCGCAACGCGCCT
CCCCTCCCCTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTCTTTTTCTCC
CGCCTTCAACCAACTCATCACCTTTTGTCTGAATCCCAACCCCTCCCTCC
GCCCCTCCCTTTCCGATGTGATGAAAGAGGCCCAGGCGCTGGTCGCTTCC
CCCTCCTTCTAGGTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGT
CTGGGCCATGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCT
TCGAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCAACCCCTCC
TCATGGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAA
CGCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCC
CGCTTACCGACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAACA
CGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGATC
AAGGCCAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCG
AACCTTCTTTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCC
CTCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCA
CACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTT
TGACGGACGCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGG
ACGCCGCCAACGAGCTCAAGTGGCCGCTACTCGTTTCCACCTCGCAACGC
GCCTCCCCTCCCCTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTCTTTTT
CTCCCGCCTTCAACCAACTCATCACCTTTTGTCTGAATCCCAACCCCTCC
CTCCGCCCCTCCCTTTCCGATGTGATGAAAGAGGCCCAGGCGCTGGTCGC
TTCCCCCTCCTTCTAGGTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGG
ACGTCTGGGCCATGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCG
CCCTTCGAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCAACCC
CTCCTCATGGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGAC
CGAACGCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCT
CTCCCGCTTACCGACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACG
AACACGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCT
GATCAAGGCCAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCC
TTCGAACCTTCTTTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCC
CTCCCTCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGG
GCCACACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGC
TCTTTGACGGACGCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTT
CGGGACGCCGCCAACGAGCTCAAGTGGCCGCTACTCGTTTCCACCTCGCA
ACGCGCCTCCCCTCCCCTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTCT
TTTTCTCCCGCCTTCAACCAACTCATCACCTTTTGTCTGAATCCCAACCC
CTCCCTCCGCCCCTCCCTTTCCGATGTGATGAAAGAGGCCCAGGCGCTGG
TCGCTTCCCCCTCCTTCTAGGTCCTCCCCAACGTGCCCGTCGACTCCCGC
GTGGACGTCTGGGCCATGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCG
CTCGCCCTTCGAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCA
ACCCCTCCTCATGGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTG
TGACCGAACGCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAG
TGCTCTCCCGCTTACCGACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTT
CACGAACACGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCT
CTCTGATCAAGGCCAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAG
GTCCTTCGAACCTTCTTTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGC
ACCCCTCCCTCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAG
GGGGGCCACACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACG
AGGCTCTTTGACGGACGCCATCGACAGATGCTCTGCTTTCACGAGGAGGC
AGTTCGGGACGCCGCCAACGAGCTCAAG back to top
|