rna9957, rna9957 (mRNA) Nannochloropsis gaditana

Overview
Namerna9957
Unique Namerna9957
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length270
Alignment locationKK037258.1:97254..97750 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102872g1.4247.mrna
Orig protein idgnl|cribi|Naga_102872g1.4247
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:97254..97750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102872g1gene9659Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9957rna9957-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20747.1cds9926Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9957 ID=rna9957|Name=rna9957|organism=Nannochloropsis gaditana|type=mRNA|length=270bp
ATGGATGCAGACACCTCAGTCTACGAAGCGGAAAACACCGTGGTGTACCA
ACGCCTACCGGATCGGGGCCGCCAAGGGCATTCGCAGCGACGCCTCCCAC
AAGATTACCTTGGAAGAAGCGCGGGTGCTGCCCGTCGCCCAATTGAGTGC
GTTTCTAAGCACCCAAGTTGCACCTTCCTTAGGTGTGCGGAGGGTCGTCA
GCAGCATCAATTTCGCCCATCGGTCGACCTTCCACCTGCATTTTGGGGCG
GGACGGTTGGGGCTTGGTAA
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protein sequence of rna9957

>rna9957-protein ID=rna9957-protein|Name=rna9957|organism=Nannochloropsis gaditana|type=polypeptide|length=116bp
MPSFPRLPVSHPPFLLTCTYPALPPSLPPSLPPPRLPPGPSGALRGRDGH
PQAPQAPGERPALPLVLHLALLPFLLRDHASLFRKPCPSSVHGRGGAGGQ
EGRREGRLWDSLRCDT
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mRNA from alignment at KK037258.1:97254..97750+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9957 ID=rna9957|Name=rna9957|organism=Nannochloropsis gaditana|type=mRNA|length=497bp|location=Sequence derived from alignment at KK037258.1:97254..97750+ (Nannochloropsis gaditana)
atgccctcttttccacgtctccctgtctcccatcCACCTTTTCTGCTGAC
GTGCACCtatcctgccctccctccctccctccctccctccctccctcccc
cccgtctccctccaggtCCAAGCGGAGCCTtacgagggagagatggtCAT
CCTCAAGCCCCCCAAGCACCTGGTGAaaggcccgccctccccctcgtcct
ccacctcgcccttctccccttcctcctccgagaccacgcttcccttttcc
ggAAACCATGTCCGTCTTCCGTCCATGGGCGCGGAGGTgcgggagggcag
gagggaaggcgggagggaaggctaTGGGACAGCCTGAGATGTGATACATA
ACGGAAAGAGCCGAGGCTCCAGGGATAGACTAGCCCTTGCTAAGATGCAC
ATTACTCAGAGTCGAACATTTGAAATTTCAAACTTGAATTTCCAAACTTA
AAAATCAAATTTGAAAACTAACCGACCTGCATCGgtgtttccccccc
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Coding sequence (CDS) from alignment at KK037258.1:97254..97750+

>rna9957 ID=rna9957|Name=rna9957|organism=Nannochloropsis gaditana|type=CDS|length=351bp|location=Sequence derived from alignment at KK037258.1:97254..97750+ (Nannochloropsis gaditana)
atgccctcttttccacgtctccctgtctcccatcCACCTTTTCTGCTGAC
GTGCACCtatcctgccctccctccctccctccctccctccctccctcccc
cccgtctccctccaggtCCAAGCGGAGCCTtacgagggagagatggtCAT
CCTCAAGCCCCCCAAGCACCTGGTGAaaggcccgccctccccctcgtcct
ccacctcgcccttctccccttcctcctccgagaccacgcttcccttttcc
ggAAACCATGTCCGTCTTCCGTCCATGGGCGCGGAGGTgcgggagggcag
gagggaaggcgggagggaaggctaTGGGACAGCCTGAGATGTGATACATA
A
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Synonyms
Publications