rna9948, rna9948 (mRNA) Nannochloropsis gaditana

Overview
Namerna9948
Unique Namerna9948
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1012
Alignment locationKK037258.1:69923..70472 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100622g1.9665.mrna
Orig protein idgnl|cribi|Naga_100622g1.9665
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:69923..70472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100622g1gene9650Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20756.1cds9917Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9948rna9948-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9948 ID=rna9948|Name=rna9948|organism=Nannochloropsis gaditana|type=mRNA|length=1012bp
AAGTCTCATGGTAGTCATCCGCAAGGAAAATACTACAGTGCTGATATGCA
TTTTTCATATTCCTGGTTGCACCTATCAGAGAGATGTATTGTATCTGTAC
ACACACCAGATAGGCATGGTGGGTGCTCTAACCATCATTTTTGGACCTCC
GCATCCTTGTTCATTCTTCTCTTTTGCCTTTTGCCCCCCCTCATTGCCCC
TCGCACGTTGCCCTGCCTGTACGCATGCAGTCGGTGGAGGACCTCGAGCG
AATGGAAGAAGAATTCAATCTGCAGCAACAGCAACAACCCTTGGTGTCCT
GCTCTGTAGAGGAAGGAAAGATGAAAAAGGGCAACGATGCCATAGAGAGA
GGAGGGACAGGGAGCGGAACCCATGAGGGAGGAGGGGGAAGAGCGCACGA
GGAGGAGGAAACAGGCAACAAAAAGAGGGGAGAAGACACGGAGATGTCCT
CCACTGGATTTTCTGTACCCGATACCGTGGCGACGATGCCCACAGGGGAA
ACAGAGCAGGAAAGCTCCCCCCCCCGGGGGCTGGGGTCCCGAGGAAACGA
GGACGGCCCTCAGGCTCAGGAAGAGGACAGACACAAGGGAGAAAGCCGGA
CAAAGGGTGGGAGGGGGGAGGGGGAGGGGAAAGGGATGCGCGGGGAGGAT
CGGCGACGGGGAAGGGAGGACAAGGAGACGACGAGGAGGGTCCCAGCGGA
GGTAGCACCGGCGACCCCCCGAAGAAGCGGGGGAGGAAGCGCCTAAAGCC
TCATCCTGACGTCCTGGCTCCCGTCGTGACCGTGGCGGGGGGGAAGGACC
TCTACGCGCTTCGCCCGCCCGGGAACATCCTCCGGCAGATGACACGCCAC
AAAACGGGTCACCTCTTTCGCTCGCTCCTTCTGTCCCTCTCTTACTACCC
GGACTGCACCTCTCGCCTTCCTGCCCTCCCTCCCTCCCTTCCTCCCCCCC
TCGAGCCCTACCTCCTCTTCACACCGGCGGATTTGTACCCCTTCCTCCGT
CATGTCCTCCCC
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protein sequence of rna9948

>rna9948-protein ID=rna9948-protein|Name=rna9948|organism=Nannochloropsis gaditana|type=polypeptide|length=88bp
MRNGEDGGGHDRRGGDGMNAGPSAAPHEGSRMDNMGLYHPQNQQQQQRHH
EQQQQQHYQQQHQQYHQQYYPPAGYPYYPPPPKPHPGG
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mRNA from alignment at KK037258.1:69923..70472-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9948 ID=rna9948|Name=rna9948|organism=Nannochloropsis gaditana|type=mRNA|length=550bp|location=Sequence derived from alignment at KK037258.1:69923..70472- (Nannochloropsis gaditana)
AAACAGAGAGCATACTAGCCAATGCCCGCTTGAGTTACTACGACTCCCAC
AAAAGATCATTTCTGCAGTCAGTCGAGACGGTGCGTGTAAGGAAACGGAG
AGGAGGAGCGAACCAGGGCTATGGTAGGACCAAGGGGAACGCGATTCGCA
CTCACCGCTCCGTTTCATTCACCAGATCACAGAGTCTTGAAGCCACCGTG
TCATATTGAGATAGAATGCGCAATGGAGAAGATGGCGGAGGCCATGACCG
GCGTGGAGGAGACGGAATGAATGCGGGACCCTCGGCTGCTCCCCATGAAG
GAAGTAGGATGGACAACATGGGGCTCTATCACCCACAAAATCAACAGCAA
CAACAACGACACCATGAGCAACAACAGCAGCAGCATTATCAACAACAGCA
CCAGCAGTACCACCAACAGTACTACCCACCGGCAGGGTACCCCTATTATC
CTCCCCCCCCCAAGCCGCATCCTGGTGGGTAGATTAGGGTCTGTCTATTG
CTTTCACACCGTCCGATTGCGGGCCCTCTCCGTGCGCACCCTGCCCACAT
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Coding sequence (CDS) from alignment at KK037258.1:69923..70472-

>rna9948 ID=rna9948|Name=rna9948|organism=Nannochloropsis gaditana|type=CDS|length=267bp|location=Sequence derived from alignment at KK037258.1:69923..70472- (Nannochloropsis gaditana)
ATGCGCAATGGAGAAGATGGCGGAGGCCATGACCGGCGTGGAGGAGACGG
AATGAATGCGGGACCCTCGGCTGCTCCCCATGAAGGAAGTAGGATGGACA
ACATGGGGCTCTATCACCCACAAAATCAACAGCAACAACAACGACACCAT
GAGCAACAACAGCAGCAGCATTATCAACAACAGCACCAGCAGTACCACCA
ACAGTACTACCCACCGGCAGGGTACCCCTATTATCCTCCCCCCCCCAAGC
CGCATCCTGGTGGGTAG
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Synonyms
Publications