rna994, rna994 (mRNA) Nannochloropsis gaditana

Overview
Namerna994
Unique Namerna994
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length492
Alignment locationCM002456.1:921369..921653 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100299g5.1145.mrna
Orig protein idgnl|cribi|Naga_100299g5.1145
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:921369..921653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100299g5gene957Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29683.1cds993Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna994rna994-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna994 ID=rna994|Name=rna994|organism=Nannochloropsis gaditana|type=mRNA|length=492bp
ATGGGATTAACCGAGACCGATATTGCCTATCTAGTCGGTATGAGTGTCGC
AGGACTGGCATTTAATGTACAGGTGAAAAGATCTGTTACTAACTCTATTC
CTAACCTTACGGCGTGGCGCGAGCTCGGATTCGGATTAGTGAGCCACTGC
AGTGGTGGCCATATTGGTACGACGTCTCATGGGATGCAGAGAAAGGGGGG
GCACCATGGAGCCCGCGGCGTGGAGTTGAAACAATGTACCGCCCCAACTA
GGCTGAGCGTTGACGTGACTCTAGACATGGCCTTAGGAACAAGGGGCTTT
CTTTGCTTTTTTGTTGTCGAAGCTCAAGAAGAGACTATACAAGGCGCATT
AAATTGTCATAAGGCGCTGCCTCTGATCGACCGAGGTAATGTGGGCGAGA
GTCGTGGCCGTGAGGAAAGATTATCTAGATCTAGGAAGTCAGAAAGCATC
CATTTGTCGTGCGATATACACCGCGCCCCACGGTCAGGCTGA
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protein sequence of rna994

>rna994-protein ID=rna994-protein|Name=rna994|organism=Nannochloropsis gaditana|type=polypeptide|length=94bp
MARHDDFCRRGAEASGSTRMCGLGRNINYFRGKRAEQALPKLRLPTALLI
NAADAANTFCGGRTACNKKAGVQHLFPILSILLCTLPHATALLT
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mRNA from alignment at CM002456.1:921369..921653-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna994 ID=rna994|Name=rna994|organism=Nannochloropsis gaditana|type=mRNA|length=285bp|location=Sequence derived from alignment at CM002456.1:921369..921653- (Nannochloropsis gaditana)
ATGGCTCGACACGATGATTTTTGCAGGAGAGGCGCAGAGGCGTCAGGCAG
CACCAGAATGTGCGGTTTGGGAAGAAACATAAACTATTTTCGGGGGAAAA
GGGCTGAACAAGCGCTTCCGAAGCTACGTTTACCCACCGCCTTGCTAATA
AATGCTGCTGACGCCGCCAACACATTTTGCGGTGGCCGTACTGCTTGTAA
CAAGAAGGCGGGTGTCCAACATCTTTTTCCGATTTTGTCGATACTCCTGT
GTACCCTGCCGCACGCAACAGCACTCTTGACCTAA
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Coding sequence (CDS) from alignment at CM002456.1:921369..921653-

>rna994 ID=rna994|Name=rna994|organism=Nannochloropsis gaditana|type=CDS|length=285bp|location=Sequence derived from alignment at CM002456.1:921369..921653- (Nannochloropsis gaditana)
ATGGCTCGACACGATGATTTTTGCAGGAGAGGCGCAGAGGCGTCAGGCAG
CACCAGAATGTGCGGTTTGGGAAGAAACATAAACTATTTTCGGGGGAAAA
GGGCTGAACAAGCGCTTCCGAAGCTACGTTTACCCACCGCCTTGCTAATA
AATGCTGCTGACGCCGCCAACACATTTTGCGGTGGCCGTACTGCTTGTAA
CAAGAAGGCGGGTGTCCAACATCTTTTTCCGATTTTGTCGATACTCCTGT
GTACCCTGCCGCACGCAACAGCACTCTTGACCTAA
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Synonyms
Publications