|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100356g5.1464.mrna |
| Orig protein id | gnl|cribi|Naga_100356g5.1464 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037258.1 | supercontig | KK037258.1:35598..36823 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9938 ID=rna9938|Name=rna9938|organism=Nannochloropsis gaditana|type=mRNA|length=2079bp
CCAGATTCTTTGTCGCATTCCCCCCTTCAGCTTATAAAGTGTCCCATATG
TCACAGAAAAATAATTAGGTCTCTTTTTCTGGGGTGTTCCACAGTTAATT
TCAAACATGGATAGTACATTGTCGGGAGCCATTTTTACACAGAAGTGCGT
ACCAAAGAAAAGACGATGGCGTCACCAAGAGCAGAAATCTCTGCAAAACA
TACGCCTAGAAACTTGCCACGAATTTAGCTATCATATCCGTTCTGCAAAT
GTGATCGAACCTCCACGTTTCCACGCATCTGGTCTGAGACGTGACGCGTC
GAAAAGTCCGCCCTGGAATGTACACGGATATAGTAGCCAGGCAAATCCAT
CGATCCTCAACCTTCCTCTTTTCTACTCGATTCATAGTATCCAGCATGCT
CTCTCCGAGCTGCTGATTACCGGACCATACACGAACGCTCTCCACTCGTT
CATTCTCCTCCATCCCATCTTTCTATACATGTCCTTGCTCAACCCACATT
GCGGCCTCTTCTACAGTATGAGAACAACTCTATCCGCCCTAGCTTGCTAA
CGGCCTCGTCACGGCTCCAACAGGATGAGACCTATGGCCAGCATGATGGT
CTAAAGGCAGGTCACATCCAGCACGTAGGACAGCGGATCGCTTTAAGTCT
CCGAGAGCCTCCCCTCTTCCTCTCCCCAGAAGGAGGCGAGGCTGAAGATG
TCGACCAAAAGGAAGAGGAGAGGATTAGGAATCAAGAGGTGGAGGAAGAA
AAGACAGAAATGAGGGAGGGGGAGATGAAGGAAGGGGAGACGGGATTGGA
AAGGAAGAGGATGGAAAGAAAGGAGGAAGAAATGCAAGAGGAAGAGAAGG
AAATCGTGCCGGCCTTCGAAAGCACGATTCAAGAAGAAGAAAAAGTGACT
GGAAGGGAATCGGAGGAAAGAGGCACCAGAGAGGAAGAGGTAGAGGCAAA
GCGTGAAGATAAAGCAGCAAGGGCAACGGAGAGAAGGCGGGCGTGTGACA
GGGGAAAAAGAAAGTTTGGGGATACGAGGGTTGAGGAGGAGTGGCTGATG
ACAAAAAGTATCGAGAAACTACGACGTTTGGATCAAAGGGAAGAAGACTG
GGAGGACAGCAAAGATAAGCCCAGAGAAGGCATGTTGACGCGAGGAATCA
AGCGTAGATCAAGCTTTGGCGCCACTGGAGGAGGTCCATCCGAAGGGAGG
AAGACCCCGGAGAAAATGAGGGCGAGCAAAAGAGACCAGTGCTTTGTTGG
AGGGGAGAAGGTGGAGAATACATCCATGATGGCGCGAAACGGCAATAGTC
ATCGTGAAGAGGACGATGGAGGTGAAGAAAGTGGAGGGAGGAACAAGAGA
TTGTGGTTACGGACTACAAGTGAAAGAGGAGACCGAGACAAGAAGGTGAA
AAGGGAGAAGGACCATAGCCAAGAGGAAGGGAGAGAAACAGCTCCATCGA
TTGATAAGACGGCATTGGGACGGATGGACGAAGAAGTCCATCATGTAACG
CCTGGGAAGGGTGGCGGGGTGAAAGAAAATCAAGGGAGGGCAGCGGCTCT
GTGGGCTTTGACGATCGAAGTCCATGCGTGGGAGCAGTGGGAAGGAGCGT
GCCTGAAGGCGCCTACGCCATTTGGCTCCCCTTTGATCGGGTGGTAAGCG
TTAGCGTCGTTAGGGTAAAATTCCTGTCGAGGATGTGCGATAAAACATCG
AGCGCTGCGACTTGGCCGTTGGATTCCAGGTATCGGATTTGAATAATAAT
GAAATATTATACAAGGGCAAGACATACAAGCTAAACGCAATGAAGGCCCG
TCCTCCGTATTTGTGGACAGGACCTTTGTCCTTTCTCTCTGAAAATGCCT
TTGGAGAACATTCCGCTATGAGAGGGGGCGGGTCGGCAAGAGAAAGAACG
AGAGATATCGAGAGGGTGGAAAGAAAGAGAAGTTAAGATGGCGGATTTTA
CCGGCAGAGGACAAGGCAAGTCGAGGTAGTCTCCGAGACACTCCTTGCGA
CCCCAAACCAAAATCAATAAAGCTCGCATCAGAAATACAGATCGAGGTCC
AGCACAAAGAAACTTTGAATCCATCCATG back to topprotein sequence of rna9938 >rna9938-protein ID=rna9938-protein|Name=rna9938|organism=Nannochloropsis gaditana|type=polypeptide|length=130bp
MSKEAHGGSNAATGVDWKRARGRHRDRCLGGKIVCRRVRQGKRLWLWMVD
DGDGMDGFIVKLRTYGASKSAAWPVCAEIPVIVRALTLSHTYMGTRKFQK
IDAVSFWGVSLVVAVACSKGGGRKGRGGGG back to topmRNA from alignment at KK037258.1:35598..36823- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9938 ID=rna9938|Name=rna9938|organism=Nannochloropsis gaditana|type=mRNA|length=1226bp|location=Sequence derived from alignment at KK037258.1:35598..36823- (Nannochloropsis gaditana)
TCCCTCCCTCAGAACGACTGGACCTCCGTGGACTATGTGAAGATGAACCT
CCTCGACAACGTCCAGCCCAACCCGACCAGGGTGCAATACGTCACCAAGG
ATCAGGTATGGTCGCCTCCATTCCCCCCCTCTTTCCCTTCCTTCCGCATC
TTTGCTCCCCTTCGTTCCCCGCGCTCATTACTTCCCCATTTCTCCCTCTC
TCCCTCCCTCTCTCCCTCCTTCCCTCCCTCTTCTCCCTCTACGCAGATTT
GTATGGACTGGGGGGCCTTCAGCAACCCGAAATGCAAGGCCTGAGGCGTC
ATGTCGGAGCGATTTTGAGAGAGATGGGGAAAGTGATTTCGAAGGGGATG
GACTTCCCTCCGAGTCGATGTACCAAGAGGGGGGAAAGGAGGGCGGATGC
TGCCTGTGGGCAATTCAAAGGCAGGAGAAGGTGCTGATGGTGGGAAAACT
CGGGCCAAGGAGGGGAACGAGGAAATGATGTAAGGGGAGATAGCACGAGT
ACAATTTGATAGCAGCGGGCAGAACACGCATAAATACTGTACGAGTAGCG
TGGGAGAGGGGGTATGGCGGGGTCGGAAGGGGAAGGTGGAAGGAGAGGGG
GAGGTAGGGAGGGAGGGAGCGGGAGGAGGATAAGAAAGGGTTTAGGTTGG
ATCCCTCACTCATGAGGGGATGAGTAAAGAGGCTCATGGGGGAAGCAACG
CGGCAACCGGGGTCGATTGGAAGCGGGCAAGGGGCAGGCATAGGGACAGA
TGTCTGGGGGGAAAAATTGTATGTAGGCGCGTCAGGCAGGGGAAAAGGCT
CTGGCTGTGGATGGTAGACGATGGGGACGGGATGGATGGGTTTATTGTGA
AATTACGTACGTATGGGGCGTCCAAGAGTGCGGCCTGGCCGGTGTGTGCT
GAGATTCCCGTGATCGTCCGAGCCCTGACTCTCTCTCACACATACATGGG
CACTCGTAAGTTTCAGAAAATAGATGCTGTAAGTTTCTGGGGTGTTTCTT
TGGTCGTAGCTGTTGCGTGTTCTAAGGGAGGGGGAAGGAAGGGAAGGGGG
GGAGGCGGATGACAAAGACGTGTGTAATTTGTCTGATGAGGATTGCCTCC
AAACCAGTATGCTGCGCGCGGCTGGGAAAAGGTATGTTCAAGGGGTGCAA
GATAAATGAAAATATATTTGAGGTTTATGGATGACATGGATGGATTCAAA
GTTTCTTTGTGCTGGACCTCGATCTG back to topCoding sequence (CDS) from alignment at KK037258.1:35598..36823- >rna9938 ID=rna9938|Name=rna9938|organism=Nannochloropsis gaditana|type=CDS|length=393bp|location=Sequence derived from alignment at KK037258.1:35598..36823- (Nannochloropsis gaditana)
ATGAGTAAAGAGGCTCATGGGGGAAGCAACGCGGCAACCGGGGTCGATTG
GAAGCGGGCAAGGGGCAGGCATAGGGACAGATGTCTGGGGGGAAAAATTG
TATGTAGGCGCGTCAGGCAGGGGAAAAGGCTCTGGCTGTGGATGGTAGAC
GATGGGGACGGGATGGATGGGTTTATTGTGAAATTACGTACGTATGGGGC
GTCCAAGAGTGCGGCCTGGCCGGTGTGTGCTGAGATTCCCGTGATCGTCC
GAGCCCTGACTCTCTCTCACACATACATGGGCACTCGTAAGTTTCAGAAA
ATAGATGCTGTAAGTTTCTGGGGTGTTTCTTTGGTCGTAGCTGTTGCGTG
TTCTAAGGGAGGGGGAAGGAAGGGAAGGGGGGGAGGCGGATGA back to top
|