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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100356g2.1468.mrna |
| Orig protein id | gnl|cribi|Naga_100356g2.1468 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037258.1 | supercontig | KK037258.1:28107..30442 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9935 ID=rna9935|Name=rna9935|organism=Nannochloropsis gaditana|type=mRNA|length=2846bp
ATGCATCGCCTCCGGACAGAGGCGCGCGTGCACGACGACATCGATCTCTC
CACGCACCTGTCCCGGGCCCAACTCGAAGAGCTGTGCGCCGACCTTTTTG
AGCGAGCCGTTCAGCCCCTGGACAGTGTCCTTCAGCAGGCGAACCTGACC
CTCAAGGACATCGCGGCCGTCGAGGTCATTGGCGGGGGCGTCCGCGTCCC
GAAAGTACAACAGGTTGTCAAGGACCGCCTGGGATCGCTGGAGCTCTCCA
TGCATCTGAACGGAGACGAAGCCATGGCACAAGGCGCCGCTTTCTACGCG
GCCAACATCTCCACGAGCTTCAAGGTCCGGCCCATTGGCGTGACGGATAT
TTTGCCCTTTGGCGTCGGCGCCCGCCTCGAGGAGGCAGTGCCTGAGGAGG
AGAAAGGAGGGGGAGGGTTCTTGGGGGCACTAGGGTTGAAGAAGAAGAAG
GAGGAAGAGAAGGAACAGGCCACGGAGAAGTGGCAGCGGCGCGCCACTAT
CTTTGCGCCCGGGCACAAGCTTCGTAGCAATCGCACTATCTCCTTCAACA
CGTCCAAGGACATCGCCCTCAACCTGACCTACGAAGCCTCGGCGCTCTTT
CCCCCAGGAGCCCAGCCCACCATCGCTCTCTTCGACATTCGAGGCGTCTC
GGAGCTCGTGAGGGAGCACGGAACCAAGACGTCCTACCCTCCCAAGGTCT
TCCTCACCTTCGAGCTGGATGCCTCGGCGCTGGTCCACTTGGTGAAGGCG
GAGGCTCGTCTCCAGGAGGACGCCCCCCCGAGCTCCGAGGCAGTCGGGGT
AAGTCCTCTTACCGGGGTCCCATCGATCCCACCCCATTGTAGGCCCCATT
CCCCCAGAACCCATCCTCGCTCCCCTTTCCTTTTGCCCTTTGCCCTTGCC
CAGAACGCGGACGCTCCGTCTGAAGAGGAAGACGGCGAGGGCGAGGGTGG
GAAGGAGGCTGAGGCGGAGGAAAAGAAGGATGCGGAGACGGTGAAAAAGG
TGGATGGGCAGAACGCGACAGCAGGCAACACTACTAGCAGCAACACCACA
GCTCCGGCGCCGCCGAAACCCATCGTCCACCGAAAAATCCTCCGTGTGAC
CAGCCATTACGAAGGCTTGCGTCTCCGGCCGGGAACGGAGGAGGAGAAGG
AGAGCAGCAAGCAAAAGCTCGCGGCGCTGCGGGCAAACGACCAGCTGAAG
AGGGAAAAAGCCGATGCGCGGAATAGCTTGGAGGCCTACCTCTACGAGGT
CAAGAACAAGATGATGGAGCACGAGGAGGAGCTCTCCCTGGTCTCAACCG
ATGAGCAACGAAGCGCGGTCCTGGCCCAAGTGGAGGCCACCGACGACTGG
ATGTATGACGAAGGCCGGGACGTGGAGGCCTCAGTGTACAAGGAGAGGAC
CACCCAAGTCCGTGCCTTGGCCGTGCCGATCTTCTTGCGCCAAGCCGAAG
GGCCAGGTGGAGCCCGTGCTGCGGCACTTGAGGCGGCGGTCAAGAATGTG
GCAGAGGTCCGGGCCCTGGTCAAGCGGTGGAACGTGACCATGCCCTGGTT
GACGGAGGAAGAGAAGGAATCCCTCCTCTCCGAAGCCACCGTGGTCGAGA
CCTGGCTCCAAGAGAAAGAGGCGGCTCAGGCTGCCAAGGAGGGACACGAG
GAACCTGCCTTTCTGTCTATTGACGTGCCCCCCCAGCTCAAGAAGATGAA
AGACATTGCCCGGCGTCTGGGCCGTAAGCCGGTGAGCCGGGAGGGGCGGG
GAGGGCGTCATGGCGGCAGGGAGGGCGTGGGCGGGGTGGGAACGGGAGGG
AGGTGGCCAGATCCACGGAGGAAGTCCTAGGAGGGAAGCGGTGCGCGGGG
GAAGAGGAAATGAAGCAGAAGATGCCTCGGAGGAAAAAGGATATAGATCG
CGTCCGAGACCCATCCATGTCTCCACCTGCCCGCTAACCCCTCTTTTCTA
TTCCCCTTCCTGTTCTCTGTTCAGGCCCCTCCTCCCCCTCCCCCTCCCAA
ACCTTCGAGCAACAAGACGGACGAAAATGCCACCGCCACGAACAGCACCA
CGGGGGAGGGAGGGAAGGAGGGAGAGGTCGAGGAAGGAGTGGAGACGGTG
AATATTAATGTAGAAGAGGGCGAGGGAGCAGGCGGGGAGGAAGACAGGGT
AGAGGAGGCTGCGAAAGCAGGGGAGGATGAGCTGTAAGCAAAGTTGGAGG
AAAAAAATGATAGAGAAGCGAGGCAACAGGGATAGAAGAGAGATTTCAAG
GGCGCATGTCGCATTAGGGCGTGCGGGCCTCAAATTTTGAAAGGGGGGTT
GGAAGTGACGAAGGAAGAAGGGGAATGGGAGGAACGAAGGGAAGGAAAGG
GAAGAAAATTGCGTTGTCATGAGCCGGAGATGAGGTGGAAGGGAAGCGAT
GGAGGCTGAGTAGCACGGTAAACTTTCCAACTGTCTCAGGATTATTCATG
TGGCGGATCAGCTTTCAGGATACTGCGGGCAAGAGTTAAAAAGAGCGAGT
GTAGTTAGCGATAACAAAGAGGGGGGAATCGATACACCAGATGCTATCCA
CAGTCAGTCTACGAAGAGAAGGGGGCGCCGATGAGAATTAAGGAAGCGCG
CTACCACTCAAAAGCAACCACGCAGGGGATCAAAGCAACCACCCTCGAAA
AGAAGAACGGACAGTATCTAATGCCGGGATGGATAGACTAGGTATAGGCA
AGAGGAAAACGTGAACCGAAAGAAGAAGAAGGAGCGTAAACATTGGGACG
CAAGTTGATGTCCTATGTTGGTCTGATTATTTTCATCCATACATCCTCAA
TATGGGCTGGCTGCAAGCACGCAAGCTGGTCTTAAAAATTCATTCT back to topprotein sequence of rna9935 >rna9935-protein ID=rna9935-protein|Name=rna9935|organism=Nannochloropsis gaditana|type=polypeptide|length=557bp
MALGCFRRKMDDPPQQQRLVQHQQQRKQQGRGQQKHQDHSVQQRPLWRHT
HVKMRKEKCARRAELIRRCMDLQAAIKKLRPETLEEFQVLENYLDLWASL
LLSPSLSVSNAPVTATSSPSRPASSSSLPPSLPPSLPPSLPPSAAPSSPI
FPTPGHQVKTAILSRSPSRPAPPSSFLSPSPPPSLPSLSATPKPAPHRPT
SSPRPSHPSISSPADTSTQRKGKWQVNRPLAYPFGEVGRHFRGEGRYGGG
EAGSGRGLGDSVENGPYGRSWKSSQTSTSVRRSGVETENSVGVATSGQGP
RRQGDGQAEAREAPPPPPHPPTPGQDGPTEGRHHQREGQRQGQPAEVPPL
SSEPAPRHAAAGWSEPHRATHQQSSNQGHAPPPPLPTPSVLPTPARDAQD
PSSSLPSSLRASFPASTALLEALLSSCSTSPPSHPPPPPLPPPPLSIPLS
NRRPAPPTSHPSFPSPSPPSSSPALSAAHPYSQALSPMPSSSHVGKSNAS
SHISHEASSLTASLTPFQGTPRPYKTRPLLSPPFPPFQRQHVPPSKDDGR
EGELNKS back to topmRNA from alignment at KK037258.1:28107..30442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9935 ID=rna9935|Name=rna9935|organism=Nannochloropsis gaditana|type=mRNA|length=2336bp|location=Sequence derived from alignment at KK037258.1:28107..30442- (Nannochloropsis gaditana)
TTGACTTCTCGACTTACTATACCAGTACGCTCTCAAATTCATTTCTAACG
GAAGCAAACCAATAGAAGTACAAGCCTGTCTGTTTCTCGTTATAAGTCGG
GTATCAGACACCTCTTTACTTCTTCCACTTTCCTTACTCGTGCGCTTTGT
CCAATGCTCGAATGGCACTAGGATGCTTTCGCCGTAAGATGGATGACCCG
CCGCAGCAACAGCGACTAGTACAACACCAACAACAACGAAAGCAACAAGG
GCGAGGGCAGCAAAAGCACCAGGATCACTCGGTGCAGCAAAGACCGCTAT
GGAGGCACACTCATGTAAAAATGAGAAAGGAAAAGTGCGCTCGGCGGGCT
GAGCTAATCAGGCGCTGCATGGATTTGCAAGCAGCCATCAAGGTCCGTTA
CGTGCAGAAAAACAGGGGGAAATGTAGTCAAGAAGATAACGATGTCAGAT
GATACGAGTGTAGACCCTCCAAGTGGTTGACTGCTGCCTTTTAACTGCAT
CTTTCCTTCTTTTTGTCCCTCTCCAACACCCCCCCTCAGAAGCTGCGGCC
GGAGACTCTAGAAGAATTTCAAGTTCTGGAGAATTACTTGGATCTATGGG
CCTCCCTCCTCCTTTCCCCTTCCCTTTCTGTCTCCAACGCCCCTGTCACT
GCCACTTCTTCTCCCAGCCGACCAGCCTCTTCCTCCTCCCTCCCTCCCTC
CCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGCCGCACCATCTT
CACCCATCTTTCCCACCCCGGGACACCAAGTCAAGACTGCCATCCTGTCT
CGATCACCGTCGCGTCCAGCTCCACCCTCCTCCTTCCTCTCTCCCTCCCC
CCCGCCCTCCCTCCCTTCCCTGTCCGCCACACCGAAACCTGCCCCCCACC
GCCCAACGTCCTCGCCTCGCCCCTCTCACCCCTCCATCTCTTCCCCAGCC
GACACGAGCACGCAACGAAAGGGAAAGTGGCAGGTAAATCGTCCTCTCGC
CTACCCTTTTGGAGAAGTTGGGCGACATTTCAGGGGAGAGGGAAGATATG
GGGGAGGAGAGGCGGGCAGCGGCCGAGGTCTGGGAGACTCAGTGGAGAAC
GGCCCATATGGGAGATCCTGGAAATCTTCGCAAACCTCGACCTCTGTGCG
GAGGTCGGGTGTAGAAACGGAGAATTCTGTCGGGGTGGCCACCTCCGGGC
AGGGCCCACGGCGACAGGGAGACGGGCAGGCGGAGGCTCGGGAGGCGCCC
CCACCACCCCCACACCCCCCGACCCCAGGGCAGGACGGGCCGACAGAGGG
ACGACACCATCAAAGAGAAGGACAGCGACAAGGACAACCAGCGGAAGTAC
CGCCCCTGTCATCGGAACCGGCGCCACGACACGCAGCTGCAGGATGGTCA
GAACCTCACCGGGCCACGCACCAGCAATCGTCAAACCAGGGTCATGCGCC
TCCCCCGCCCCTCCCCACCCCCTCCGTCCTCCCCACGCCTGCACGAGACG
CACAAGATCCTTCCTCCTCTCTTCCCTCTTCCCTTCGCGCCTCTTTCCCC
GCGTCTACCGCCCTTCTGGAAGCGCTCTTGTCCTCCTGCTCTACCTCACC
TCCTTCCCACCCTCCTCCGCCGCCTCTGCCGCCTCCGCCGCTTTCTATCC
CTCTTTCCAACCGCCGACCTGCTCCTCCCACATCGCACCCCTCTTTTCCC
TCGCCTTCTCCGCCCTCCTCCTCCCCGGCCCTCTCCGCAGCCCATCCTTA
CTCCCAAGCCCTTTCTCCCATGCCCTCGTCTTCCCACGTCGGTAAAAGTA
ACGCTTCCAGCCACATTAGTCATGAAGCTTCCTCCCTTACAGCCTCCCTC
ACGCCCTTCCAAGGCACTCCCCGACCTTACAAGACTCGACCGCTCCTTTC
CCCTCCCTTTCCGCCATTCCAACGGCAACACGTCCCACCGAGCAAGGACG
ACGGCAGGGAGGGTGAACTCAACAAATCCTAGCAGGAGTCCTTGTTCTCT
GATTATCGGCATTGCCGCGCACTCATAAATGCCACGAGCTGGCTGTGTGA
TGGATCTAGAGTGCGGGAGAGGACAGGATTCGGCGTGGAGAATGTGCGGG
AGGGGAGAAAAAAAGATTTGAGCCGAAAGGAAGAGGAAGAGGGACGATGC
TGAGGTGAGTGAAATCAAGCTAACCGGCTTGGTGAAAAGGGGGATAGAAT
AGGAGACAGAGAAGAAATGGACGGACAGGGGACGGGAGGGCGAAAGAGAA
TGAATTTTTAAGACCAGCTTGCGTGCTTGCAGCCAGCCCATATTGAGGAT
GTATGGATGAAAATAATCAGACCAACATAGGACATC back to topCoding sequence (CDS) from alignment at KK037258.1:28107..30442- >rna9935 ID=rna9935|Name=rna9935|organism=Nannochloropsis gaditana|type=CDS|length=3348bp|location=Sequence derived from alignment at KK037258.1:28107..30442- (Nannochloropsis gaditana)
AAGCTGCGGCCGGAGACTCTAGAAGAATTTCAAGTTCTGGAGAATTACTT
GGATCTATGGGCCTCCCTCCTCCTTTCCCCTTCCCTTTCTGTCTCCAACG
CCCCTGTCACTGCCACTTCTTCTCCCAGCCGACCAGCCTCTTCCTCCTCC
CTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCGC
CGCACCATCTTCACCCATCTTTCCCACCCCGGGACACCAAGTCAAGACTG
CCATCCTGTCTCGATCACCGTCGCGTCCAGCTCCACCCTCCTCCTTCCTC
TCTCCCTCCCCCCCGCCCTCCCTCCCTTCCCTGTCCGCCACACCGAAACC
TGCCCCCCACCGCCCAACGTCCTCGCCTCGCCCCTCTCACCCCTCCATCT
CTTCCCCAGCCGACACGAGCACGCAACGAAAGGGAAAGTGGCAGGTAAAT
CGTCCTCTCGCCTACCCTTTTGGAGAAGTTGGGCGACATTTCAGGGGAGA
GGGAAGATATGGGGGAGGAGAGGCGGGCAGCGGCCGAGGTCTGGGAGACT
CAGTGGAGAACGGCCCATATGGGAGATCCTGGAAATCTTCGCAAACCTCG
ACCTCTGTGCGGAGGTCGGGTGTAGAAACGGAGAATTCTGTCGGGGTGGC
CACCTCCGGGCAGGGCCCACGGCGACAGGGAGACGGGCAGGCGGAGGCTC
GGGAGGCGCCCCCACCACCCCCACACCCCCCGACCCCAGGGCAGGACGGG
CCGACAGAGGGACGACACCATCAAAGAGAAGGACAGCGACAAGGACAACC
AGCGGAAGTACCGCCCCTGTCATCGGAACCGGCGCCACGACACGCAGCTG
CAGGATGGTCAGAACCTCACCGGGCCACGCACCAGCAATCGTCAAACCAG
GGTCATGCGCCTCCCCCGCCCCTCCCCACCCCCTCCGTCCTCCCCACGCC
TGCACGAGACGCACAAGATCCTTCCTCCTCTCTTCCCTCTTCCCTTCGCG
CCTCTTTCCCCGCGTCTACCGCCCTTCTGGAAGCGCTCTTGTCCTCCTGC
TCTACCTCACCTCCTTCCCACCCTCCTCCGCCGCCTCTGCCGCCTCCGCC
GCTTTCTATCCCTCTTTCCAACCGCCGACCTGCTCCTCCCACATCGCACC
CCTCTTTTCCCTCGCCTTCTCCGCCCTCCTCCTCCCCGGCCCTCTCCGCA
GCCCATCCTTACTCCCAAGCCCTTTCTCCCATGCCCTCGTCTTCCCACGT
CGGTAAAAGTAACGCTTCCAGCCACATTAGTCATGAAGCTTCCTCCCTTA
CAGCCTCCCTCACGCCCTTCCAAGGCACTCCCCGACCTTACAAGACTCGA
CCGCTCCTTTCCCCTCCCTTTCCGCCATTCCAACGGCAACACGTCCCACC
GAGCAAGGACGACGGCAGGGAGGGTGAACTCAACAAATCCTAGATGGCAC
TAGGATGCTTTCGCCGTAAGATGGATGACCCGCCGCAGCAACAGCGACTA
GTACAACACCAACAACAACGAAAGCAACAAGGGCGAGGGCAGCAAAAGCA
CCAGGATCACTCGGTGCAGCAAAGACCGCTATGGAGGCACACTCATGTAA
AAATGAGAAAGGAAAAGTGCGCTCGGCGGGCTGAGCTAATCAGGCGCTGC
ATGGATTTGCAAGCAGCCATCAAGAAGCTGCGGCCGGAGACTCTAGAAGA
ATTTCAAGTTCTGGAGAATTACTTGGATCTATGGGCCTCCCTCCTCCTTT
CCCCTTCCCTTTCTGTCTCCAACGCCCCTGTCACTGCCACTTCTTCTCCC
AGCCGACCAGCCTCTTCCTCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCGCCGCACCATCTTCACCCATCTTTCCCA
CCCCGGGACACCAAGTCAAGACTGCCATCCTGTCTCGATCACCGTCGCGT
CCAGCTCCACCCTCCTCCTTCCTCTCTCCCTCCCCCCCGCCCTCCCTCCC
TTCCCTGTCCGCCACACCGAAACCTGCCCCCCACCGCCCAACGTCCTCGC
CTCGCCCCTCTCACCCCTCCATCTCTTCCCCAGCCGACACGAGCACGCAA
CGAAAGGGAAAGTGGCAGGTAAATCGTCCTCTCGCCTACCCTTTTGGAGA
AGTTGGGCGACATTTCAGGGGAGAGGGAAGATATGGGGGAGGAGAGGCGG
GCAGCGGCCGAGGTCTGGGAGACTCAGTGGAGAACGGCCCATATGGGAGA
TCCTGGAAATCTTCGCAAACCTCGACCTCTGTGCGGAGGTCGGGTGTAGA
AACGGAGAATTCTGTCGGGGTGGCCACCTCCGGGCAGGGCCCACGGCGAC
AGGGAGACGGGCAGGCGGAGGCTCGGGAGGCGCCCCCACCACCCCCACAC
CCCCCGACCCCAGGGCAGGACGGGCCGACAGAGGGACGACACCATCAAAG
AGAAGGACAGCGACAAGGACAACCAGCGGAAGTACCGCCCCTGTCATCGG
AACCGGCGCCACGACACGCAGCTGCAGGATGGTCAGAACCTCACCGGGCC
ACGCACCAGCAATCGTCAAACCAGGGTCATGCGCCTCCCCCGCCCCTCCC
CACCCCCTCCGTCCTCCCCACGCCTGCACGAGACGCACAAGATCCTTCCT
CCTCTCTTCCCTCTTCCCTTCGCGCCTCTTTCCCCGCGTCTACCGCCCTT
CTGGAAGCGCTCTTGTCCTCCTGCTCTACCTCACCTCCTTCCCACCCTCC
TCCGCCGCCTCTGCCGCCTCCGCCGCTTTCTATCCCTCTTTCCAACCGCC
GACCTGCTCCTCCCACATCGCACCCCTCTTTTCCCTCGCCTTCTCCGCCC
TCCTCCTCCCCGGCCCTCTCCGCAGCCCATCCTTACTCCCAAGCCCTTTC
TCCCATGCCCTCGTCTTCCCACGTCGGTAAAAGTAACGCTTCCAGCCACA
TTAGTCATGAAGCTTCCTCCCTTACAGCCTCCCTCACGCCCTTCCAAGGC
ACTCCCCGACCTTACAAGACTCGACCGCTCCTTTCCCCTCCCTTTCCGCC
ATTCCAACGGCAACACGTCCCACCGAGCAAGGACGACGGCAGGGAGGGTG
AACTCAACAAATCCTAGATGGCACTAGGATGCTTTCGCCGTAAGATGGAT
GACCCGCCGCAGCAACAGCGACTAGTACAACACCAACAACAACGAAAGCA
ACAAGGGCGAGGGCAGCAAAAGCACCAGGATCACTCGGTGCAGCAAAGAC
CGCTATGGAGGCACACTCATGTAAAAATGAGAAAGGAAAAGTGCGCTCGG
CGGGCTGAGCTAATCAGGCGCTGCATGGATTTGCAAGCAGCCATCAAG back to top
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