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Properties
| Property Name | Value |
|---|
| Product | protein nlrc3 |
| Orig transcript id | gnl|cribi|Naga_100299g9.1144.mrna |
| Orig protein id | gnl|cribi|Naga_100299g9.1144 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:914760..918070 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna991 ID=rna991|Name=rna991|organism=Nannochloropsis gaditana|type=mRNA|length=1521bp
GGCTATCGATCGCTCTGGCCTCTTTGCTGCCCCCTCGACACCTTCCTGCA
GCTTTCCGCCTCCCAACCGTGCTTCTGGACGCCGTGAACAGCAAGCCGAA
GCCATACAGCCACATCTCCTGCCTCAAATACCAGTGTAAAGTGCCGGAGA
GGGAGCCCGGCCCGGAGTGTCAGTGCGAAGGCCAGTGCGGGGAGGGATGC
CTGAATCGGCTCTTGCATATCGAATGCGTCGGAGGGGGTGGAGGGGGAGG
GACAAAAGAGGGCGGCGAGGATGAGAACGGGGGTAGTGGACTCAAGGGGG
ACAAGAAGGAGAAACATCACAACTGCAACGTAGGACCGGCCTGTGGGAAT
CGTGCCTTTCGGAACAAGGAGTATATCACGCACCAAATATTCCGGGAGGG
AGGCTGTGGGTGGGGTTTGCGGACGTTGGAGAATGTGCGCAAGGGACAGT
TGGTCTTTGAGTACGTGGGGGAGGTTATCGACGACGACATCTTAGAGTTG
CGCCTCCAAGAACACGCGCGGGAGCGCCCCAACGACCACAACATGTACGT
GATGGAGCTTGAGAGCGGCTACTACCTGGATGCCCGGACCAAGGGGAACG
CCTCGCGCTTCATCAACCACTCCTGTGCGCCGAATTGCGAGCTACAGAAA
TGGAATGTGAAAGGCTTCACGCGGATCGGCATCATGGCCATAACCGATAT
ATCTGCGGGCACGCCCTTGTCCTACGATTACCAGTTTGCCACGAACGAAG
AGGGGAAATTTAAGTGCCACTGTGGGGCCCCAACCTGCCGCGGGACTCTT
GCACCTCAGAATCAGCTCACTGAAGATCAGACAATGGAAGCTCTTCGTAC
AGGCTCACGCACAGACCGCAAAAAGTTGCTCCAATTGTGCAAAAAGAGGG
AGCGTCGGGAGCAAGCCCGACAGCAGCAGGCGGCTAAAGAGAGTGCAGCG
AGGAAGAATTTGACATCACAGTTTTTGCCTGGAGACTCTATACTTGAGAT
CCGCTCTGGCCCGCCAACGCGATTCTTAGGACTCGCCAAGGAAAGTAAGA
TTTTTCTCGTCCGAAATGTCATCCAAGGCGATGATTTTGTGACGCGCCAG
GAGCTTCGGAGGAGGCGTCGATTGCGACGTAGTGTGACAGAGGAACGGGA
GAGCATAATATGCGGATTGAAAAGGGAAAGGACGGGGCATTTAGCTTGAT
GGATCAAGATTAAGCATATCAAGGTGTTGTACGCAATGCGGACAAATTCT
TTTATGGTCCATGACGTACCATGGCGTTCCCCCCCCCCCCTTGTCCAGGA
CCCGAGAGCTCTCCGGGAGCGAGCGGGAGACGAAAAAAGAACCACGAAAA
CTTACGTATCTTGTTTCGCTTTGGTAGACATTCAAATTAAAAGGTGAAAT
ACAAAGTCTCTGCTCTCTTGATAGGACTCTTGCGTTTGAAAAGCCCAACA
AGCGTCAGGATGGAAAAAGCAATTAAAAAAAAGATCACTTCGTTTAAAGA
AAAACATACAGGAAAGCTCAT back to topprotein sequence of rna991 >rna991-protein ID=rna991-protein|Name=rna991|organism=Nannochloropsis gaditana|type=polypeptide|length=948bp
MATTPAAYAPQQPPSIQTPPSATAQSMPHPAAMAAPIAPQPSIGPARCLY
PFQPSTGNGMGNMNNPQGSDNGNENFIEAHSDALKDSSSTRNRSDLVLSR
PSSAPMLAEICAAAEGGGSDVPLTRDREAFAWHQKELPAAAVSGLDEEGK
GGHVVASASRSTTKALLRKLGILAPPASTSACARSVATRAVQGWQMANKQ
GASEAGAARGPPTRGPRTLRAPARASHSSTDPASAWKDRASNGQEESDIV
DRVNGVPRDLELQNKRITGPQAKKLCAALATDTSLVSLKVGCNELGDEGA
EAVAQALAHHPSLITLDLGFNGIGDRGAEALAGSLWSNRRLKTLYLSGNC
IGVRGAQALGRALQQNMSLEVLHLTGNAVSAGGAALMGQGLAHNRSLRSL
YLAGNALGPQGSAELFGGLARNAGLECLFLSDSGIGDEGAVALAGALLRH
RRLRVLELGFNRLTAVGIAPLLAALQGCTHLQVLRLDNNEVDNGGAAEVA
RALHALTDLQVLDVGFNAMRSDGVATLMRAVAGHASLRALTLSGNTLKTE
GAKAVAEALLQNNCLQELYLDHTSIGSAGERFLASGLAGNPCLGLCVLTG
LRLGNVLARLGGGQPQGLDALSNEQSLAFLRLKRREPEADVRQLVAMVAA
RMPAARNSASSPRTPASWSVQGGGGCEGGAATKGEEKAGLGASGGGGWDE
TAMMMLSTPPLPTFYSRSGGQEKHAHRPRDQVHPPDGMAAGSLPPALACG
LVNCTKAPFDGAELSALHHFYFSPPPNAVGTAMGTVSPPGQHYYHHRGSL
IGGRRDEAEAEAAAAYAQQQNALESASSGQERLAAGSASENAAAIAGNKV
MMMMRVESEAHLPPTKRQCNLNSRVRVAAYPHLQRRLEVMLSNRGREEPQ
VLTLLRQLRFLEENVGPASKPCYTPETLENVLLRSLSTATADTRGKGT back to topmRNA from alignment at CM002456.1:914760..918070- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna991 ID=rna991|Name=rna991|organism=Nannochloropsis gaditana|type=mRNA|length=3311bp|location=Sequence derived from alignment at CM002456.1:914760..918070- (Nannochloropsis gaditana)
TGGACACGAGCCTATGTTATTGATGATTGTATTCACAAATGTGACCTCTT
TCTGAAACTTTTTATTTGTTGTATCTGTACACAGGAGCACGAAGAATCAT
GCAACAATTAGCGCAGCGGACAAAACTCAAAGAAGGAATAGAGCTCCTCT
GAAGACGGCAGTCGCGGAGGATTAGTGATACGAAAGGGCCAGCAGAGCAG
AACATAGCGTAAAAAGTCGAGTAAAAGGGAGATTGCGGGAAATTAAGACA
TCTGTGGGTTCTGTCACCCTTTGTGAGGGCGACATTCTTCCACCTCCCTT
ATTTGCATCGTTGGAATTATGGCTACCACCCCTGCGGCATATGCACCGCA
GCAGCCCCCCTCGATCCAGACACCACCATCAGCAACAGCACAAAGTATGC
CACACCCTGCTGCTATGGCCGCCCCCATCGCACCGCAACCATCGATTGGC
CCTGCGCGGTGCTTGTATCCCTTCCAACCGTCCACCGGGAATGGAATGGG
GAACATGAATAATCCTCAAGGCAGTGACAATGGCAATGAGAATTTCATCG
AAGCTCACAGTGATGCCCTCAAAGATAGCAGTAGCACCCGGAATCGGAGC
GATCTTGTCCTGAGCCGCCCCTCTAGCGCGCCGATGTTGGCGGAAATATG
TGCCGCGGCTGAAGGAGGGGGCAGCGATGTGCCCCTGACTCGTGATAGAG
AAGCCTTTGCTTGGCACCAGAAAGAACTCCCAGCAGCGGCAGTGAGCGGG
CTGGATGAGGAGGGGAAGGGCGGCCATGTGGTAGCCTCGGCCTCGCGAAG
CACCACCAAGGCTCTCCTTCGCAAGCTCGGTATCCTCGCACCACCTGCCT
CGACGAGTGCTTGCGCTCGCAGCGTGGCTACCAGGGCTGTCCAAGGATGG
CAAATGGCGAATAAACAGGGAGCTTCGGAGGCAGGCGCCGCCCGGGGGCC
GCCAACGCGGGGGCCACGCACTTTGAGAGCCCCGGCTCGCGCCTCGCATT
CTAGCACCGACCCCGCCTCTGCCTGGAAGGACCGCGCCAGCAACGGTCAG
GAAGAGAGCGACATCGTGGACCGGGTCAACGGCGTGCCTAGGGACCTGGA
GCTCCAAAACAAACGCATCACAGGCCCGCAGGCGAAGAAGCTCTGCGCAG
CCCTCGCCACCGACACCAGTCTCGTGAGTCTCAAGGTGGGCTGCAACGAG
CTGGGAGACGAGGGGGCCGAGGCCGTGGCACAGGCGCTGGCTCATCATCC
CTCCCTCATCACGCTGGATTTGGGCTTTAACGGCATCGGTGACAGGGGCG
CGGAAGCTCTTGCTGGGAGTCTCTGGTCCAACCGGCGGCTTAAGACCCTC
TACCTCTCAGGGAACTGCATCGGCGTCCGAGGCGCTCAAGCCCTGGGCCG
GGCGCTCCAGCAGAATATGAGTCTCGAAGTGCTGCATTTGACGGGGAACG
CGGTCAGTGCGGGGGGAGCTGCCCTGATGGGACAAGGGCTGGCGCACAAT
CGCTCATTGCGGAGCCTGTACCTGGCTGGGAACGCCCTCGGCCCCCAGGG
AAGCGCGGAACTTTTCGGGGGCTTGGCGCGAAATGCGGGCCTGGAGTGCT
TATTTTTGAGCGATAGTGGGATCGGAGACGAGGGCGCCGTGGCACTTGCA
GGGGCTTTGCTGCGACATCGGCGCTTGCGGGTTCTGGAGCTCGGCTTCAA
TCGCCTCACGGCCGTGGGTATCGCTCCCCTCCTGGCCGCTTTGCAAGGGT
GCACTCATCTGCAGGTCTTGCGCCTTGACAACAACGAGGTGGACAACGGG
GGCGCGGCGGAGGTGGCTAGGGCCTTGCACGCGCTCACCGATCTACAGGT
CCTGGACGTGGGGTTCAACGCCATGCGCTCCGACGGCGTCGCCACGCTAA
TGCGGGCTGTGGCGGGACACGCCAGCCTCCGGGCCTTGACCCTCTCGGGG
AACACGCTCAAGACCGAAGGCGCCAAGGCGGTGGCCGAGGCTTTGCTCCA
GAACAACTGCCTCCAAGAGCTCTACCTCGACCATACCTCCATCGGCAGTG
CGGGGGAGCGATTCTTGGCGTCAGGACTGGCGGGGAACCCGTGTCTGGGT
TTGTGCGTCCTCACAGGTCTGCGGCTGGGCAATGTGTTGGCGCGTCTTGG
CGGGGGTCAACCACAGGGTTTGGACGCGTTAAGTAACGAGCAGAGCTTGG
CGTTCCTGCGCCTGAAACGGCGGGAGCCCGAGGCGGACGTGCGTCAGTTG
GTAGCGATGGTGGCGGCCAGGATGCCGGCAGCACGCAATTCTGCGTCTTC
CCCTCGGACACCAGCCTCCTGGTCGGTCCAAGGGGGGGGGGGATGTGAGG
GAGGAGCCGCGACGAAAGGGGAGGAGAAGGCGGGGCTGGGTGCAAGCGGC
GGAGGTGGGTGGGATGAGACCGCCATGATGATGTTGAGCACCCCCCCCTT
GCCCACGTTCTACTCTCGGAGCGGCGGTCAGGAGAAACATGCACACAGAC
CACGGGATCAAGTCCATCCCCCCGACGGTATGGCCGCGGGCTCTCTTCCC
CCCGCGCTGGCATGTGGCCTCGTCAATTGCACAAAAGCGCCCTTTGATGG
TGCGGAGCTGTCTGCCCTGCACCACTTTTACTTCTCTCCGCCCCCCAATG
CTGTTGGGACGGCGATGGGTACGGTTAGCCCCCCAGGGCAGCACTATTAC
CACCACCGCGGTTCTCTGATAGGGGGACGTCGGGATGAAGCCGAGGCCGA
AGCCGCCGCTGCCTACGCGCAGCAGCAGAATGCACTCGAAAGCGCAAGCT
CTGGTCAGGAGAGACTTGCCGCGGGCAGTGCAAGTGAGAATGCAGCTGCC
ATTGCGGGCAACAAGGTCATGATGATGATGCGGGTGGAGAGTGAAGCGCA
TTTGCCTCCAACGAAGCGACAGTGCAACCTCAACTCCCGCGTGCGGGTGG
CCGCTTACCCGCATTTACAGCGCCGGCTGGAAGTCATGCTCAGCAACCGG
GGGAGGGAGGAGCCTCAGGTCTTGACCCTCTTGCGTCAACTGCGCTTTCT
GGAGGAGAACGTGGGACCTGCAAGTAAGCCGTGTTACACTCCAGAGACCC
TGGAGAACGTGCTCTTGCGCTCCTTGTCGACAGCAACGGCGGATACACGG
GGAAAAGGCACTTGATATGAAAACATACGTTGTGGGAAATGAGATCGTGT
CGCACTTCTTCTGGCATCTTTTGTGCTGTACACAGCGAGATGGAATTGAG
CCTTAGTTGCTTGTCACACTTTGTAAACCAAGAAACGAAAATACGCAACA
GCCCATATGAG back to topCoding sequence (CDS) from alignment at CM002456.1:914760..918070- >rna991 ID=rna991|Name=rna991|organism=Nannochloropsis gaditana|type=CDS|length=2847bp|location=Sequence derived from alignment at CM002456.1:914760..918070- (Nannochloropsis gaditana)
ATGGCTACCACCCCTGCGGCATATGCACCGCAGCAGCCCCCCTCGATCCA
GACACCACCATCAGCAACAGCACAAAGTATGCCACACCCTGCTGCTATGG
CCGCCCCCATCGCACCGCAACCATCGATTGGCCCTGCGCGGTGCTTGTAT
CCCTTCCAACCGTCCACCGGGAATGGAATGGGGAACATGAATAATCCTCA
AGGCAGTGACAATGGCAATGAGAATTTCATCGAAGCTCACAGTGATGCCC
TCAAAGATAGCAGTAGCACCCGGAATCGGAGCGATCTTGTCCTGAGCCGC
CCCTCTAGCGCGCCGATGTTGGCGGAAATATGTGCCGCGGCTGAAGGAGG
GGGCAGCGATGTGCCCCTGACTCGTGATAGAGAAGCCTTTGCTTGGCACC
AGAAAGAACTCCCAGCAGCGGCAGTGAGCGGGCTGGATGAGGAGGGGAAG
GGCGGCCATGTGGTAGCCTCGGCCTCGCGAAGCACCACCAAGGCTCTCCT
TCGCAAGCTCGGTATCCTCGCACCACCTGCCTCGACGAGTGCTTGCGCTC
GCAGCGTGGCTACCAGGGCTGTCCAAGGATGGCAAATGGCGAATAAACAG
GGAGCTTCGGAGGCAGGCGCCGCCCGGGGGCCGCCAACGCGGGGGCCACG
CACTTTGAGAGCCCCGGCTCGCGCCTCGCATTCTAGCACCGACCCCGCCT
CTGCCTGGAAGGACCGCGCCAGCAACGGTCAGGAAGAGAGCGACATCGTG
GACCGGGTCAACGGCGTGCCTAGGGACCTGGAGCTCCAAAACAAACGCAT
CACAGGCCCGCAGGCGAAGAAGCTCTGCGCAGCCCTCGCCACCGACACCA
GTCTCGTGAGTCTCAAGGTGGGCTGCAACGAGCTGGGAGACGAGGGGGCC
GAGGCCGTGGCACAGGCGCTGGCTCATCATCCCTCCCTCATCACGCTGGA
TTTGGGCTTTAACGGCATCGGTGACAGGGGCGCGGAAGCTCTTGCTGGGA
GTCTCTGGTCCAACCGGCGGCTTAAGACCCTCTACCTCTCAGGGAACTGC
ATCGGCGTCCGAGGCGCTCAAGCCCTGGGCCGGGCGCTCCAGCAGAATAT
GAGTCTCGAAGTGCTGCATTTGACGGGGAACGCGGTCAGTGCGGGGGGAG
CTGCCCTGATGGGACAAGGGCTGGCGCACAATCGCTCATTGCGGAGCCTG
TACCTGGCTGGGAACGCCCTCGGCCCCCAGGGAAGCGCGGAACTTTTCGG
GGGCTTGGCGCGAAATGCGGGCCTGGAGTGCTTATTTTTGAGCGATAGTG
GGATCGGAGACGAGGGCGCCGTGGCACTTGCAGGGGCTTTGCTGCGACAT
CGGCGCTTGCGGGTTCTGGAGCTCGGCTTCAATCGCCTCACGGCCGTGGG
TATCGCTCCCCTCCTGGCCGCTTTGCAAGGGTGCACTCATCTGCAGGTCT
TGCGCCTTGACAACAACGAGGTGGACAACGGGGGCGCGGCGGAGGTGGCT
AGGGCCTTGCACGCGCTCACCGATCTACAGGTCCTGGACGTGGGGTTCAA
CGCCATGCGCTCCGACGGCGTCGCCACGCTAATGCGGGCTGTGGCGGGAC
ACGCCAGCCTCCGGGCCTTGACCCTCTCGGGGAACACGCTCAAGACCGAA
GGCGCCAAGGCGGTGGCCGAGGCTTTGCTCCAGAACAACTGCCTCCAAGA
GCTCTACCTCGACCATACCTCCATCGGCAGTGCGGGGGAGCGATTCTTGG
CGTCAGGACTGGCGGGGAACCCGTGTCTGGGTTTGTGCGTCCTCACAGGT
CTGCGGCTGGGCAATGTGTTGGCGCGTCTTGGCGGGGGTCAACCACAGGG
TTTGGACGCGTTAAGTAACGAGCAGAGCTTGGCGTTCCTGCGCCTGAAAC
GGCGGGAGCCCGAGGCGGACGTGCGTCAGTTGGTAGCGATGGTGGCGGCC
AGGATGCCGGCAGCACGCAATTCTGCGTCTTCCCCTCGGACACCAGCCTC
CTGGTCGGTCCAAGGGGGGGGGGGATGTGAGGGAGGAGCCGCGACGAAAG
GGGAGGAGAAGGCGGGGCTGGGTGCAAGCGGCGGAGGTGGGTGGGATGAG
ACCGCCATGATGATGTTGAGCACCCCCCCCTTGCCCACGTTCTACTCTCG
GAGCGGCGGTCAGGAGAAACATGCACACAGACCACGGGATCAAGTCCATC
CCCCCGACGGTATGGCCGCGGGCTCTCTTCCCCCCGCGCTGGCATGTGGC
CTCGTCAATTGCACAAAAGCGCCCTTTGATGGTGCGGAGCTGTCTGCCCT
GCACCACTTTTACTTCTCTCCGCCCCCCAATGCTGTTGGGACGGCGATGG
GTACGGTTAGCCCCCCAGGGCAGCACTATTACCACCACCGCGGTTCTCTG
ATAGGGGGACGTCGGGATGAAGCCGAGGCCGAAGCCGCCGCTGCCTACGC
GCAGCAGCAGAATGCACTCGAAAGCGCAAGCTCTGGTCAGGAGAGACTTG
CCGCGGGCAGTGCAAGTGAGAATGCAGCTGCCATTGCGGGCAACAAGGTC
ATGATGATGATGCGGGTGGAGAGTGAAGCGCATTTGCCTCCAACGAAGCG
ACAGTGCAACCTCAACTCCCGCGTGCGGGTGGCCGCTTACCCGCATTTAC
AGCGCCGGCTGGAAGTCATGCTCAGCAACCGGGGGAGGGAGGAGCCTCAG
GTCTTGACCCTCTTGCGTCAACTGCGCTTTCTGGAGGAGAACGTGGGACC
TGCAAGTAAGCCGTGTTACACTCCAGAGACCCTGGAGAACGTGCTCTTGC
GCTCCTTGTCGACAGCAACGGCGGATACACGGGGAAAAGGCACTTGA back to top
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