rna9901, rna9901 (mRNA) Nannochloropsis gaditana

Overview
Namerna9901
Unique Namerna9901
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length297
Alignment locationKK037257.1:86896..88258 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101570g1.5249.mrna
Orig protein idgnl|cribi|Naga_101570g1.5249
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:86896..88258 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101570g1gene9608Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9901rna9901-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20803.1cds9870Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9901 ID=rna9901|Name=rna9901|organism=Nannochloropsis gaditana|type=mRNA|length=297bp
CCCACAACAGTTGAACCGACGTGCTCTCGGTGTACCCGCAACATTTTGGC
GGATTCCATTGTTCAGATGGTCAAAGAGGGTCTTCCGCTTTTTACCGAGG
TGTGCTCGACGGACGTGCTGGGCTTCTCCTTCGGCGGCCGCGGGTACAAG
GAGCAGCTCGAGGACGCGATTGCCAAGACGAAAGAGTTCTGCGCCGTCGA
CGTCTCTCTCCGCACCCTCAAACACAAGGACTCCACCATCTCAGTCGTGT
GGGTCACGCATAATTTTGCCTTCCTCGAGAGAGAGAGAGAGAGATAG
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protein sequence of rna9901

>rna9901-protein ID=rna9901-protein|Name=rna9901|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MRPQAPWRSPLPFSLPPNVVVLVLLLLCCRPLTGKEAKEAAEGSSTPMDA
GKEHVRPLGLTSTGPEGKESEPLNFLYEQMKSQAELLKEGYACFVTGECI
ACSAEEMSQAFCQTSKRREEVTCEREEVVDGATHMRTYTTYSACARTSSD
SLVEVLRFQAAMATVGGLAFYGARHQKVKHLTLYERRTGAGR
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mRNA from alignment at KK037257.1:86896..88258-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9901 ID=rna9901|Name=rna9901|organism=Nannochloropsis gaditana|type=mRNA|length=1363bp|location=Sequence derived from alignment at KK037257.1:86896..88258- (Nannochloropsis gaditana)
TCTTTAGGGTACTCTGCACATTTTTTGGCACCACCTAAGGTAGATCTCCA
CACCCACTGCCATTCAGTCGGAATTTGTTTTTCATGGGGGAACAGGAGGG
GAGATGCGAGGTGTACCCTGCGTCTGTCATAAAGGAGGCATAGAAATGAA
TGATGGATGAGGTTGTGCCCACTTGCAAATGACTTTCTTCAACTCCTGGG
GCTTCATTTAATTCCTGACCTCCCGTTCCCGTCCATTTCACACGTGTGAA
TCGGTACAGAGGCATGCGTCCGCAAGCGCCGTGGCGGAGTCCCCTTCCTT
TCTCGCTGCCTCCCAATGTCGTCGTCCTTGTGCTCCTCCTCCTATGCTGC
CGTCCGCTCACTGGGAAAGAAGCCAAGGAGGCCGCGGAAGGCAGCTCGAC
GCCCATGGACGCCGGGAAGGAGCATGTGCGTCCCCTAGGGTTGACCTCGA
CGGGGCCGGAAGGGAAAGAGTCGGAGCCGCTCAATTTTTTGTACGAGCAA
ATGAAGAGCCAAGCGGAGCTGTTGAAGGAGGGCTACGCGTGCTTTGTGAC
AGGAGAATGCATAGCGTGCTCCGCGGAGGAGATGGTGAGGGAGGAAGGAG
GGAGGGAAGGGAGACGCCACGGGAAACCAGGACTGGCTCTGTAATGGATG
CCATCTCCCATTCGTCTCTATTCTAATGTATTAATGATACCCTCATGTAT
GTTCCTGACAGAGTCAAGCCTTTTGTCAAACGAGTAAACGCCGGGAGGAG
GTTACCTGCGAGCGGGAGGAAGTCGTGGACGGAGGTGCGTCGCGATGGCA
CCCGCCTTCCCTCCCTCCTTCTTTCCCTCCCTCCCTCCCTCTCTGCTTCT
CTCCCTCCTTACCTCCCTGCCTCCTCCCCTCCCCCTCGAATTAACGCTCC
TCCGTCCCACATTTTAACGTTGCTGTGCTCACCTCCATCGAACACAGTAG
CTGACATCTAAACATCGTAACCATCCACTCACTCGTCCCTTTCCTCCCTC
CCTTTCTCCCTCCCTCCCTCCCTCCTTCCCACCCTTTCCCTCCTCCTCTC
CTCAGCCACCCACATGAGGACTTACACCACTTACTCCGCCTGTGCTCGCA
CCTCGTCGGACAGTCTGGTAGAGGTGCTGCGGTTTCAAGCCGCGATGGCC
ACGGTGGGCGGCTTGGCATTTTACGGCGCGAGGCACCAGAAAGTGAAGCA
TTTGACATTGTACGAACGGAGGACCGGGGCGGGAAGGTGAGGGAGGGAAG
GAGGGAGGGAGGGAGGGCGGGAGGACGGAGGAGCGGATGAAGAGATGGGG
GAGAAAGGTTTGTACATACGTCTTTTTCACATAGATACGGCGTGGCACGG
AGAGAGGGAGGGA
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Coding sequence (CDS) from alignment at KK037257.1:86896..88258-

>rna9901 ID=rna9901|Name=rna9901|organism=Nannochloropsis gaditana|type=CDS|length=1737bp|location=Sequence derived from alignment at KK037257.1:86896..88258- (Nannochloropsis gaditana)
CCACCCACATGAGGACTTACACCACTTACTCCGCCTGTGCTCGCACCTCG
TCGGACAGTCTGGTAGAGGTGCTGCGGTTTCAAGCCGCGATGGCCACGGT
GGGCGGCTTGGCATTTTACGGCGCGAGGCACCAGAAAGTGAAGCATTTGA
CATTGTACGAACGGAGGACCGGGGCGGGAAGGTGAAGTCAAGCCTTTTGT
CAAACGAGTAAACGCCGGGAGGAGGTTACCTGCGAGCGGGAGGAAGTCGT
GGACGGAGATGCGTCCGCAAGCGCCGTGGCGGAGTCCCCTTCCTTTCTCG
CTGCCTCCCAATGTCGTCGTCCTTGTGCTCCTCCTCCTATGCTGCCGTCC
GCTCACTGGGAAAGAAGCCAAGGAGGCCGCGGAAGGCAGCTCGACGCCCA
TGGACGCCGGGAAGGAGCATGTGCGTCCCCTAGGGTTGACCTCGACGGGG
CCGGAAGGGAAAGAGTCGGAGCCGCTCAATTTTTTGTACGAGCAAATGAA
GAGCCAAGCGGAGCTGTTGAAGGAGGGCTACGCGTGCTTTGTGACAGGAG
AATGCATAGCGTGCTCCGCGGAGGAGATGCCACCCACATGAGGACTTACA
CCACTTACTCCGCCTGTGCTCGCACCTCGTCGGACAGTCTGGTAGAGGTG
CTGCGGTTTCAAGCCGCGATGGCCACGGTGGGCGGCTTGGCATTTTACGG
CGCGAGGCACCAGAAAGTGAAGCATTTGACATTGTACGAACGGAGGACCG
GGGCGGGAAGGTGAAGTCAAGCCTTTTGTCAAACGAGTAAACGCCGGGAG
GAGGTTACCTGCGAGCGGGAGGAAGTCGTGGACGGAGATGCGTCCGCAAG
CGCCGTGGCGGAGTCCCCTTCCTTTCTCGCTGCCTCCCAATGTCGTCGTC
CTTGTGCTCCTCCTCCTATGCTGCCGTCCGCTCACTGGGAAAGAAGCCAA
GGAGGCCGCGGAAGGCAGCTCGACGCCCATGGACGCCGGGAAGGAGCATG
TGCGTCCCCTAGGGTTGACCTCGACGGGGCCGGAAGGGAAAGAGTCGGAG
CCGCTCAATTTTTTGTACGAGCAAATGAAGAGCCAAGCGGAGCTGTTGAA
GGAGGGCTACGCGTGCTTTGTGACAGGAGAATGCATAGCGTGCTCCGCGG
AGGAGATGCCACCCACATGAGGACTTACACCACTTACTCCGCCTGTGCTC
GCACCTCGTCGGACAGTCTGGTAGAGGTGCTGCGGTTTCAAGCCGCGATG
GCCACGGTGGGCGGCTTGGCATTTTACGGCGCGAGGCACCAGAAAGTGAA
GCATTTGACATTGTACGAACGGAGGACCGGGGCGGGAAGGTGAAGTCAAG
CCTTTTGTCAAACGAGTAAACGCCGGGAGGAGGTTACCTGCGAGCGGGAG
GAAGTCGTGGACGGAGATGCGTCCGCAAGCGCCGTGGCGGAGTCCCCTTC
CTTTCTCGCTGCCTCCCAATGTCGTCGTCCTTGTGCTCCTCCTCCTATGC
TGCCGTCCGCTCACTGGGAAAGAAGCCAAGGAGGCCGCGGAAGGCAGCTC
GACGCCCATGGACGCCGGGAAGGAGCATGTGCGTCCCCTAGGGTTGACCT
CGACGGGGCCGGAAGGGAAAGAGTCGGAGCCGCTCAATTTTTTGTACGAG
CAAATGAAGAGCCAAGCGGAGCTGTTGAAGGAGGGCTACGCGTGCTTTGT
GACAGGAGAATGCATAGCGTGCTCCGCGGAGGAGATG
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Synonyms
Publications