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Properties
| Property Name | Value |
|---|
| Product | small nuclear ribonucleoprotein |
| Orig transcript id | gnl|cribi|Naga_101532g2.42.mrna |
| Orig protein id | gnl|cribi|Naga_101532g2.42 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037257.1 | supercontig | KK037257.1:67204..68326 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9891 ID=rna9891|Name=rna9891|organism=Nannochloropsis gaditana|type=mRNA|length=207bp
ATGGCCGAGAATTGGTGCACGATTGAATCGGACCCTGGAGTGTTTACGGA
GGTCATCGAGAACTTTGGGGTTGAAGGGGTTCAGGTAGAAGAGATTTATG
ATTTGGATCCGGCGTCCTTCGCCGACCTGGCGCCTGTGTATGGCCTGGTC
TTCTTGTTCAAGTGGAAGCAGGAGGAGACGGGAGAATCAGGCACCCAAGA
AGCTTAG back to topprotein sequence of rna9891 >rna9891-protein ID=rna9891-protein|Name=rna9891|organism=Nannochloropsis gaditana|type=polypeptide|length=100bp
MSVTGKGGVGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILR
DVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKVRAQRFA back to topmRNA from alignment at KK037257.1:67204..68326+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9891 ID=rna9891|Name=rna9891|organism=Nannochloropsis gaditana|type=mRNA|length=1123bp|location=Sequence derived from alignment at KK037257.1:67204..68326+ (Nannochloropsis gaditana)
GAAGAAGAAACCGCCGTGACAATTCTCAAGCTTGAGGACGGGGATAAGTG
CAGCAgccagagggaggcagcggctaCAGGGAACCCAACTCTGATATAAT
CTGTTTGGCTGTCACCAGGTTCTTCGCGCTACGCTCAAAGGAAGCGGAAA
AATCACTTTGGAGCAGGGCATTCGCGTGTTCATCATAAATCTCTGTCGAA
TCACGCCGTGAGAAGCTCGTGTTGTGAATGTCGGTGAccgggaagggcgg
ggtcgGTATCCCCATCATCTTATTGCACGATGCCGAGGTGAGTGCGGGGG
GAATGGAGATGTACTGTAATCCTACCCATGGTTCccgcttctttctcttc
tgtGTGCACCCTCTGGAAGATGTGTGACTGACAAGCAAGTGCCTATTATT
Atctgtcctttcttcttgcctcccccctccctccctccctccctcccccc
ctcccttccgcccactCTCCCGCCCGCCATCTTATCCTGTACTTCTCCAG
GGGGGCATCATCACAGTTGAAACCAGGACCGGCGAACTCTATCGCGGCCT
GCTGGACGAAGCCGAAGACAACATGAATTTAATCCTGAGGGACGTGACCA
AAACCAACGTGCACGGCAAGGAGAGTAAAGTGGAGTTGATCTACATCAAG
GGCTCCCAggtcaggagggaagggagggagggagggagggaggagccatt
GGTTTGGAGGTTACGtaagaggagaggaaggcagggccAGGTCGGGAAAG
CCTCCGTGAGGTCGCTCCCGTCGGTCCTGCTCGGCCTCGGTCGCGGGGCC
TTCGCGTCGCCACACCCATTGCAGTGTACTGCAGTGCATTTGCATCCGTC
ATGTTACTTTTCATAGTGGGGACTTGTCGGCTGTGTGTGGAAGCTTCGTC
CGTCCTTGTCGTGTCCTCCTGGCTTGGGGGTCGCCGCCACTCCTTGCTCA
GTCTCGGTTTCGGTTTTTACTCACCTTGGggtctctctccttctttgacT
TCCCCTTGCGCACGGCAGGTAAATTTTATGATACTGCCCGACATGCTGAA
AAAGGCGCCCATGTTCAAGCGCATCAAGGTACGAGCACAACGCTTTGCCt
gaaatggaggggagggggagagg back to topCoding sequence (CDS) from alignment at KK037257.1:67204..68326+ >rna9891 ID=rna9891|Name=rna9891|organism=Nannochloropsis gaditana|type=CDS|length=909bp|location=Sequence derived from alignment at KK037257.1:67204..68326+ (Nannochloropsis gaditana)
ATGTCGGTGAccgggaagggcggggtcgGTATCCCCATCATCTTATTGCA
CGATGCCGAGGGGGGCATCATCACAGTTGAAACCAGGACCGGCGAACTCT
ATCGCGGCCTGCTGGACGAAGCCGAAGACAACATGAATTTAATCCTGAGG
GACGTGACCAAAACCAACGTGCACGGCAAGGAGAGTAAAGTGGAGTTGAT
CTACATCAAGGGCTCCCAgGTAAATTTTATGATACTGCCCGACATGCTGA
AAAAGGCGCCCATGTTCAAGCGCATCAAGGTACGAGCACAACGCTTTGCC
tgaATGTCGGTGAccgggaagggcggggtcgGTATCCCCATCATCTTATT
GCACGATGCCGAGGGGGGCATCATCACAGTTGAAACCAGGACCGGCGAAC
TCTATCGCGGCCTGCTGGACGAAGCCGAAGACAACATGAATTTAATCCTG
AGGGACGTGACCAAAACCAACGTGCACGGCAAGGAGAGTAAAGTGGAGTT
GATCTACATCAAGGGCTCCCAgGTAAATTTTATGATACTGCCCGACATGC
TGAAAAAGGCGCCCATGTTCAAGCGCATCAAGGTACGAGCACAACGCTTT
GCCtgaATGTCGGTGAccgggaagggcggggtcgGTATCCCCATCATCTT
ATTGCACGATGCCGAGGGGGGCATCATCACAGTTGAAACCAGGACCGGCG
AACTCTATCGCGGCCTGCTGGACGAAGCCGAAGACAACATGAATTTAATC
CTGAGGGACGTGACCAAAACCAACGTGCACGGCAAGGAGAGTAAAGTGGA
GTTGATCTACATCAAGGGCTCCCAgGTAAATTTTATGATACTGCCCGACA
TGCTGAAAAAGGCGCCCATGTTCAAGCGCATCAAGGTACGAGCACAACGC
TTTGCCtga back to top
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