|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100519g1.3619.mrna |
| Orig protein id | gnl|cribi|Naga_100519g1.3619 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037257.1 | supercontig | KK037257.1:56813..58912 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9886 ID=rna9886|Name=rna9886|organism=Nannochloropsis gaditana|type=mRNA|length=1257bp
ATGGGTGACGTGAAAAGGCAGCAGGCTGCGGCAGTGGAGGCTTCTATTCA
TCAACCCCTGGAACGCCTCCTGTCTCTCGACGATGTTCAAGCTGAAGCCC
GGAAACGTCTCCCCAAGGCTCTCTATGAGTACGTCGCCTCGGGTAGCGAC
GACGAGCAGACATTGTGGGAGAATCGACAAGGATTCAAGCGCCATCTTCT
CTGTCCAAGAGTGGGTGTAGACGTGTCAAAAGTGGACATGAGCCTGACCC
TCTTCGAAGACACCGACCACGCCCAACACGCTTCCCTCCCAATCATGATC
TCCCCGGCCGGCGTCCATTGCCTCATGCACCCCGACGGTGAAATCGCTAC
GGTCAGAGCCGCGCAACGCGAGCAGGTCATCATGGGCGTCTCGCAACACG
CGACCACATGCATGGAAGACGTGGCCAGGGCCGCCGTGACCCTCCCCACG
CCCTCCCCCGCGTCCTCCCCCCCGCCCTCCGCCCCTCCCTCCACCCCCCT
CTGGTACCAACTCTACATCCTCCGCGACCGGTCTCTCACCTTGTCCTTGG
TCCGACGCGCCGAGTCCTCCGGGTATCAAGCCTTGATCCTGACGGTCGAC
TCCCCTGTCTTTGGGTTCCGGGAAGCTGACTGGCGGAATGGGTTTGCGGG
CTTGCCGGAAGGGATGATTTTAGCCAACTACCCTACAAAACACGCGTATG
ATGACAGAATGAAGGGGGGCTGGGACCAGAATTCTGAAGCCTTGCTGGAC
CGAAGCAGCAGCTTCGAGAGAGACTTGCCCTGGCTGTGTTCGGTGACTTC
CTTGCCTGTAGTTGTCAAGGGGATCGTAGCGCCCGAGGACGCGGTCGCGG
CGGCCGAAGCCGGCTGCCACGGCATCATTGTCAGCAACCACGGCGGGCGA
CAATTGGACTCCTGCATCTCGTCCATTGAAGCCCTCCCCGGCATTGCCGA
GGCCCTGCGCCAGAAAGGCTTTCTACTCGACGCGGACCGCCGGGCGCAAA
GACCTCGCGCGCGCCCGGCGGGATCTCAAAGGGGAGAGCGGGGACGGCGT
GGAATCGCGGCTTCTCATTGCCGAACTTCCACCGGTGGGATCGAATCCTT
CGGCGCACGCGCTGAATGGGGGGACGGAGTGGATGGCTTCCTGACAGAGT
GGTTGTGGACGTCGATGCGATGGATTCCCCTGCGTCTGGGCGGGATAGGC
ATTCTGACAGAGAGAGGCAGAGGCAAAGCAAGGAGCATGGCTTGTCTTCT
TGAATGA back to topprotein sequence of rna9886 >rna9886-protein ID=rna9886-protein|Name=rna9886|organism=Nannochloropsis gaditana|type=polypeptide|length=125bp
MEAPKKRRGRPAKRKMDTKEEESRESGGRGGRMAGGGAGGTKERKTQPEK
GGRWKGIPGSDRLVTGRSDGSGRGLSQREKWTCSEWSHRSSGIEEKEIES
ASSNRRVVDGREYTEREVCFAVRID back to topmRNA from alignment at KK037257.1:56813..58912- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna9886 ID=rna9886|Name=rna9886|organism=Nannochloropsis gaditana|type=mRNA|length=2100bp|location=Sequence derived from alignment at KK037257.1:56813..58912- (Nannochloropsis gaditana)
CCCTTCTCCCTGTCGTCCTCGAAGTGGACGGCCCCTCCATTTCCGCCTGA
ACGACATCCAATGCCCCATGGCGACACTGCCTTCAAACGCCGCCTCGTCC
GCGCGCAGGTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCATCCATGACTGCTGGAAAAGATGTGAACGATCG
AGGGAGTTGCCATCTGCAGTCATGCCTCTCCGAAGTCTTTCCTTTCCTCC
TTCCCTCTCTCTCTCTTCCTCCCGCCCGCCCTCCCCCAGACCCATTCCTA
CGCTGGTTTGGTTCCCATCCCGTGGTTCGACTGGCGCCAAGCGACCTCCC
TCCTGAAGAAAGGGAGGACCGGGCAGGGCGCGTCCGAGAGGATGCGGGAC
GTAGAGGGCTACCTGCGCAAGGCGTTCAGGTGGGGAGGGAGGGAGGGAGG
GAAGGAGGGAGGGAGGTGGGGGAGGAGGGAGGGGGAGGGCGTGCGTCCTT
CAGGAAACGAGAGGGGAATGTCAGGTCTGGACAAGGGAAAAAGGGGTTGG
TGAATGGGGGGAGGGTCCAAGGGTGAGGAGGAAGGGGAGAAGGAGGAGGG
CACGCGCGAGGAGGCAGGGAGGAGACGATGGGGGGAAGGGAGTCAGGAGG
ATACATATATTTACAGCCCCAATCCTCCCCATTATATATATGTACATCTT
GGTATGTATATATCCATACATATTCATTCTTCCAGAAAATAGGAAATCGT
GCCATACTTGCATGATTGTAGGATAGATGAGGGGCGAAGGTCAGCTGTAG
GAGAGGAATCTGTGAGAGTTAAGGTTACAGTTAGGGCCAATAAGAGCATT
GGCGGACTACTGCCCAAACGAGAGAGGAGGGACGTGAACGTCTCCACCTC
CCAAGCCTCACACAGGCCCACTTCCAACCCTTTATCTGCCTCCCTCCCTT
TTCCTTCATCCTCCCTCCCTTTTCCTTCATTCTCCCTCCCTTTTCCTTCA
TCCTCCCTCCCTTCTCCTTCATCCTCCCTCCCTTTTCCTTCATCCTCCCT
GACGCAGGGCGGAGGGTCTCTCCATGGAGGACTACCTCCCTTCTCACGCC
AACCGCTCCGTGCCTGCCCCGCCCCCTCCCTCCTTCCCTCCCTCTTCCTC
CCCTCCTCTCCCGGCGCCCAGAGCCAGGACCCGCCAGACGCCGGCTACTA
AAAAAAGTCTCCCCGTCTACCCCTGCCTCATCGATACCCCTCCCTCCTTC
CCTCCCTGCTATCAATAACCGCCACTCTCTGAGAAAAGTGACTTCCGCGA
CGGTTGTCTCGGAGATGGAAGCTCCGAAAAAGAGGCGTGGACGCCCAGCA
AAGAGGAAAATGGACACAAAGGAGGAAGAAAGCAGAGAGAGTGGGGGAAG
GGGGGGGCGGATGGCCGGGGGAGGGGCAGGAGGGACGAAGGAAAGGAAGA
CGCAGCCGGAAAAAGGAGGAAGATGGAAAGGAATTCCAGGATCAGACCGA
CTTGTCACCGGCCGAAGCGACGGAAGTGGCAGAGGGCTCTCCCAAAGAGA
AAAGTGGACGTGCTCGGAGTGGAGCCACCGCTCCAGTGGAATCGAGGAGA
AAGAAATCGAAAGTGCCTCAAGCAATCGCAGAGTCGTCGATGGACGGGAG
TACACGGAACGAGAAGTTTGTTTCGCGGTCAGGATTGACTAATGAGAATA
TGTAGACCGACGGGGAATACATGCCAAGAGAGAGAAACGCCCCTGAATGT
GGGCGGAAGAAGGGAGGTCGCAGACGAGAAACAAATCATAGAACCACAGT
GAAATTAGGTCATGACTAGACTTGAGAATATTAGCGGCTAATTCATATGG
GCTCAACGGGTTTCGATTGATCTGAAAGATTATAATGAAGCTCTCTTTGG
TGACGATATCGCACCTTTACCTTCGATGCAAAGGGCAGGTAGGACTAGGT
GTAATGGTCATACTCCGTCATCGAAAAAGTACACGTGCGCATGTATATAT
AGTGGAAAAGAATGACCCTGGTTGACCGAGTGAAATGGCTTTACTCAATT
TGTGTTGTCCTTCTCATTTGAAAACGCTTTAAAGTTAACCTCCCCTGTCC
back to topCoding sequence (CDS) from alignment at KK037257.1:56813..58912- >rna9886 ID=rna9886|Name=rna9886|organism=Nannochloropsis gaditana|type=CDS|length=378bp|location=Sequence derived from alignment at KK037257.1:56813..58912- (Nannochloropsis gaditana)
ATGGAAGCTCCGAAAAAGAGGCGTGGACGCCCAGCAAAGAGGAAAATGGA
CACAAAGGAGGAAGAAAGCAGAGAGAGTGGGGGAAGGGGGGGGCGGATGG
CCGGGGGAGGGGCAGGAGGGACGAAGGAAAGGAAGACGCAGCCGGAAAAA
GGAGGAAGATGGAAAGGAATTCCAGGATCAGACCGACTTGTCACCGGCCG
AAGCGACGGAAGTGGCAGAGGGCTCTCCCAAAGAGAAAAGTGGACGTGCT
CGGAGTGGAGCCACCGCTCCAGTGGAATCGAGGAGAAAGAAATCGAAAGT
GCCTCAAGCAATCGCAGAGTCGTCGATGGACGGGAGTACACGGAACGAGA
AGTTTGTTTCGCGGTCAGGATTGACTAA back to top
|