rna9845, rna9845 (mRNA) Nannochloropsis gaditana

Overview
Namerna9845
Unique Namerna9845
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1806
Alignment locationKK037256.1:248086..250451 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100164g7.9742.mrna
Orig protein idgnl|cribi|Naga_100164g7.9742
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:248086..250451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100164g7gene9558Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20862.1cds9814Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9845rna9845-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9845 ID=rna9845|Name=rna9845|organism=Nannochloropsis gaditana|type=mRNA|length=1806bp
ATGGCCACAAAGACTTTCCATTTCCAACGCTCTACGTGCTGCAACCCTTA
TCGACGCATCGCAGTATTGTCCCTCGCCATTCTCGGCCTGACCCTGGTGT
CATTCTATTTTCACATACGCTTCGACGTGACCTCGTTCAAACTCCTAGCC
TTCAACCTGATAGATGAGACTCCTTCCAGCAATGCAAACAACCTCGTGAC
CATCACGACCACCACCAATAGCAGCAGTATATCCCCTACTCACACAACAG
CACCAGCACTTCATGCAAGCCTCGCCCCTATGATCATGCCCGCTTGGACG
GACAACCATTGCTTCTATGTGTTGGGGGGGATCTTGACACGGGACCAGAT
CGATGAGCATTTGTGCATGGACGTGATGGTGGCGGGTCGGCGCATGTTCC
TGGAGGTAAAAGAGAACTTCGGTGTGCGTGACCTCAACGAGGATTGGTCA
TTGGGGAAGTCGCACAACGTGGCAGATCCCGACGAGGTCGTGGCGTTGGG
TGGGAAAGTACTGTGTCACGTCAGCGGAGAGGGGAACGACGTAGAGGAAG
AGGCCGTGCTTGTCCCTATGAGAAGCCCTTTCAGCCCTTACGCAAGCGGA
CTCGTCCATATCATTCGTTGCCCTGTGGCGGATGCCTTTCCGCTGGACGC
TGGAGACGTGGATGTGACCGTCCGGGTCGTATTTGGCGGCAATCAAACAC
AGGACTCCATCAAGTATGGATGGGAGTGGCCCCGAAGCAACGGCACGGAC
GCTGGTCGAGGGCAGGGCAAGGGCGGCGAAGAGCGGTTTCGAGTCGTCGT
GCCACGTGCGACGCGTCACGCGGGCTACTTTAGCTACCTACCAGAGGCTT
CCAAACTGGATCCATGGCAAGCTCAGCCCGACAAACTGCACCTCTGTGTG
GCGGGACTGTACACAAACTTCACTTGTCCGCTGCTCGATCAGACGTTGGA
GTTTGTCGAGTACCACACACAGCAAGGGGTGGCGCACATCCACCTGGGAG
TCGACTATCCTGTAGGATCGGAGTCGTGGAAGGCCGTGCTGCGGGTGCTG
CGGCCTTACATAGACGAGCGAAAGGTGTCCGTTATGTCGACACAGAGCGT
GCGAGGCCCTGGATGGATCGGGACGGACCAGTTCAAGCTCTACTTCTACG
CCTCTTGTCTCGCCTACACCAAGGGCTTGGCTACGTGGGTGGGCATCTGG
GACATCGACGAGTACCTGGTGCCACGTGACGAGGGCGCAAGCACGATTGT
GCAGTCGCTTGACACCGTGCTGAGAGAGGCTGACAAGACAGCGAAGGACG
TCTGTTTCATGTCTTTCACGTCATTTGGCTTCATGGAGGTCAAGGAGCTC
AGGACCATCGGCAACCGGACATGGGCGGGACAGATGTTTGGGCACTGGCG
GCAAGCAAAGAGTGACGACAACTGGACAAAGTCGATCCTGTCCAACCGAA
ACGCCTACTTCACTGGCTCCCACTACCCGGGAGCTTGCAGGGACGTAGGG
GGTAGACGATGGGGCGAGAATCCACGCGCAGACCTCTGGCGTATCAATGC
AAGCGTACTGGCCATGCATCACTATCGAGGGAAGGTGTCCTCGGTAAAGA
AGCCGAAGTCCAACGTCGCGGAGGACGACGAGTACGGCATGCGTCTTTTC
CCCGCGGTCTTGGACGGCCTACGGTCAAGGAAGGCAGACGAGATCGTGGA
GAGGGAGTGCGGCTTCCGCCCGTCCATGGCTGTCGAAGATGTAGGGTTAG
GGAGCAAGAAGCAAGCTATGCGTCGCAAGATGTGTGTCCTATGCAGTGGA
GGATGA
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protein sequence of rna9845

>rna9845-protein ID=rna9845-protein|Name=rna9845|organism=Nannochloropsis gaditana|type=polypeptide|length=111bp
MESHAPLHNPHTLKLDMRILSLRLFRYCLGLCLHPSLTPFFLKCSYIRHP
LVPHHLYFLRSFPQIYGKPYLSWVWVNTYNVDCTVEGFRLASGLSCLYGV
LLSKKRSVKTC
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mRNA from alignment at KK037256.1:248086..250451-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9845 ID=rna9845|Name=rna9845|organism=Nannochloropsis gaditana|type=mRNA|length=2366bp|location=Sequence derived from alignment at KK037256.1:248086..250451- (Nannochloropsis gaditana)
TGAAGTATGCAACAAATGCTTCCAAAAAAGATTGACGAGGAATGTCCAAA
TTCTTCTTCATTTTTACGTATTCCTGTTCTCTTCTCCATTTATTCTTTCT
GCTCTCAAACCTACTAGGGATAGGACACATAGGGGCATCTCACACTCCCT
TGCCACAGCCTTGGAACCGTAACTACTAGCCGCAACAGATGAAGAGATGG
CATTAAAGCACTGGCTTAGAGCAATGTTGAGCTTTTCTGTCGCGTCATAT
GCCTGGGTTGTCTGGCATCATGTACCGTCCGAAGAGACAGCCTATCCAGT
CCCTCGATTTAGTGCACTTTCACAAACACCGGGCCCTGTGAACACTACTT
CCATAAGGATTATGGCTTTGAGGTCTGCGCCCACATTCATACATATTCCT
TAGACTGGAGGGACATCAATCGAAACAGAATTGGCCATCCACGGTATACA
TGTTGGAAGGTGCGCATTTTAAAGGAAGGAGGATGGAGGCCAGCGCACAT
ACAAAATTAAGCAAGGGCGTTGCAATGGGTGGCACTCATTACCACTTGAA
CACGTCAACAATAGCATCACTGTCGTGAGGGATCCAATGGATCGATTACT
TAGCGAATTTTGTCGGGAACGCGCAAGGGAGATATATCGAGCCGAGCTTT
CTTGTGAGGGACTATCGAGTTAGATTTTGGACATTTTATCGAATGAAGTG
ACGGACAACAACCACATATATGATTGTCACCTACTACCCCAGTGGGAATA
TGCAAAATGGGCTGATAGTATCGTCCCGTTTTGTGCATTAGGAACACCGC
ATGGAAATAAATTGCTAGCTGAGCACTTCGAAGTTGCGAACTTTACCCTG
CGGGAGGAGAATCACGTTCATATGCGTGATGGAGAGTGTAAAACTTTTAC
CAACTCTGTACAAAGGGCTTTTAACGTCACCAACTGTATTTCATCGACGG
CGTATGCCTTGTTCCAAGACATTTATCGGCTTGATTACAAGTATCTTGGG
AAACATTTCACGTGTGCATGAAGAACTGCACAACACAACAAAAAACGTTT
CTCTGGGTAACAGAATGACATCCATCTAACCGAAGCCTAGGCGCCTTTGT
CCCTCATTTATTGTAAGTCTTACTAACAGCTCTACTATTATTTCATGCCT
GCTGTCAGTTCGCAGGTATAAGGTACACCTTGGCATTGCGATGAGGGGCA
AGCAACATATTTAATGCACAAAATATTTCAACATCGACTGAACAAGGTAT
CAAAAATATGGTACGACATGACAAGAATAGCGTTTGCGAGGAGAGAACGC
TGAACAAGAATTTTGTTTCTGAAGATGCATAGGTTTTCAGGGCTTTTGTG
AGGACACCTTTTCATATATTGTACTTGTTTGTGTGGACACTTTTCCATAT
ATTCTACTCCTTCATCCTCCATACGATCTATTGGCGGAGACTTCGCGTTG
CTCCTGGCTTGCGAATTACACAGTGGGGACGAAAAATACTGTCGAAGGTT
TACCTCGGGAGATCCTTCATTGAGGGTTTTCGAATGGCACACATTTATCC
TTATATTGTATGGAAAGTCATGCCCCTCTACATAACCCACACACCCTCAA
GCTTGACATGCGCATTCTCAGCCTTCGTCTTTTCCGGTATTGCCTGGGGT
TATGCCTTCATCCTTCTTTGACTCCTTTCTTCCTCAAGTGTTCCTACATT
CGTCACCCACTTGTGCCACATCATCTCTACTTCTTACGGTCCTTTCCCCA
AATATACGGAAAGCCCTACCTATCCTGGGTTTGGGTGAATACCTACAATG
TCGACTGTACTGTTGAGGGCTTCAGGCTGGCGAGTGGGTTGTCATGCCTG
TACGGAGTGCTGCTAAGCAAAAAGCGCAGCGTAAAAACGTGCTAGAGGCT
CGATTGTTTGAACTGAGCATTGTGGGAGTTGCTAAGGGCAATTTCAGCCA
TAAGAGGAAAGGATGAGGGCCAAGAACGAGGCACGGAAGCCCATGTTCAC
CTGTGTCCATTGGGGAAATCCCATTCTTGCGTGTGTCATTCATGCCTTCC
GATTACGTTGCAGTGAAATAAAACTAGTCCATGTTGATGAAAATTGGTGC
CAGTCCAAGGCTTAACCGGCTCCTTTTTAGTGATCTACAGAGAAGTGTTT
GTATCCCAGATACTTGCGACATTCCTGAGTACGCAAGCAGACTCTCGTAA
TTACTTTGTGGGAGGCGAGACGCTTTAAATAATCGAAGAATGCTTCCTAT
TTTCAGATTGGATCTGTGCTGTGACACACACTTACTTTGATCATAGTTGT
CCTCGATATTCCTGTTATGAAATAGACAGAGAGGGATAAAGATATGACTT
GAAAGTACACATACGC
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Coding sequence (CDS) from alignment at KK037256.1:248086..250451-

>rna9845 ID=rna9845|Name=rna9845|organism=Nannochloropsis gaditana|type=CDS|length=336bp|location=Sequence derived from alignment at KK037256.1:248086..250451- (Nannochloropsis gaditana)
ATGGAAAGTCATGCCCCTCTACATAACCCACACACCCTCAAGCTTGACAT
GCGCATTCTCAGCCTTCGTCTTTTCCGGTATTGCCTGGGGTTATGCCTTC
ATCCTTCTTTGACTCCTTTCTTCCTCAAGTGTTCCTACATTCGTCACCCA
CTTGTGCCACATCATCTCTACTTCTTACGGTCCTTTCCCCAAATATACGG
AAAGCCCTACCTATCCTGGGTTTGGGTGAATACCTACAATGTCGACTGTA
CTGTTGAGGGCTTCAGGCTGGCGAGTGGGTTGTCATGCCTGTACGGAGTG
CTGCTAAGCAAAAAGCGCAGCGTAAAAACGTGCTAG
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Synonyms
Publications